RNA–Protein interactions for RNA: ENST00000566549.5

MSLN-207, Transcript of mesothelin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSLN, Length 2,418 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSLN-207ENST00000566549 B3GNT5Q9BYG0 378 aa19.59■□□□□ 0.73
MSLN-207ENST00000566549 FGFR1OP2Q9NVK5 253 aa19.59■□□□□ 0.73
MSLN-207ENST00000566549 CPA4Q9UI42 421 aa19.59■□□□□ 0.73
MSLN-207ENST00000566549 SHOC2Q9UQ13 582 aa19.59■□□□□ 0.73
MSLN-207ENST00000566549 EFR3BQ9Y2G0 817 aa19.59■□□□□ 0.73
MSLN-207ENST00000566549 DNAH12Q6ZR08 3092 aa19.59■□□□□ 0.73
MSLN-207ENST00000566549 APOC4-APOC2K7ER74 178 aa19.59■□□□□ 0.73
MSLN-207ENST00000566549 PRPSAP2O60256 369 aa19.59■□□□□ 0.73
MSLN-207ENST00000566549 GPR32O75388 356 aa19.59■□□□□ 0.73
MSLN-207ENST00000566549 SPAG7O75391 227 aa19.59■□□□□ 0.73
MSLN-207ENST00000566549 APOC2P02655 101 aa19.59■□□□□ 0.73
MSLN-207ENST00000566549 CYP2C9P11712 490 aa19.59■□□□□ 0.73
MSLN-207ENST00000566549 TAZQ16635 292 aa19.59■□□□□ 0.73
MSLN-207ENST00000566549 FNBP1LQ5T0N5 605 aa19.59■□□□□ 0.73
MSLN-207ENST00000566549 C1orf228Q6PIY5 440 aa19.59■□□□□ 0.73
MSLN-207ENST00000566549 CYP4V2Q6ZWL3 525 aaPredicted RBP19.59■□□□□ 0.73
MSLN-207ENST00000566549 PAIP2Q9BPZ3 127 aaKnown RBP19.59■□□□□ 0.73
MSLN-207ENST00000566549 CCDC134Q9H6E4 229 aa19.59■□□□□ 0.73
MSLN-207ENST00000566549 SLC45A1Q9Y2W3 748 aa19.59■□□□□ 0.73
MSLN-207ENST00000566549 FARP1Q9Y4F1 1045 aaPredicted RBP19.59■□□□□ 0.73
MSLN-207ENST00000566549 MCF2LO15068 1137 aa19.58■□□□□ 0.72
MSLN-207ENST00000566549 ABHD2P08910 425 aa19.58■□□□□ 0.72
MSLN-207ENST00000566549 PDGFRBP09619 1106 aa19.58■□□□□ 0.72
MSLN-207ENST00000566549 HIC1Q14526 733 aa19.58■□□□□ 0.72
MSLN-207ENST00000566549 CCDC14Q49A88 953 aa19.58■□□□□ 0.72
MSLN-207ENST00000566549 ZC3H12AQ5D1E8 599 aaKnown RBP19.58■□□□□ 0.72
MSLN-207ENST00000566549 CEP128Q6ZU80 1094 aa19.58■□□□□ 0.72
MSLN-207ENST00000566549 PARK7Q99497 189 aaKnown RBP19.58■□□□□ 0.72
MSLN-207ENST00000566549 RECQL4O94761 1208 aa19.57■□□□□ 0.72
MSLN-207ENST00000566549 ZNF200P98182 395 aaPredicted RBP19.57■□□□□ 0.72
MSLN-207ENST00000566549 KRT81Q14533 505 aa19.57■□□□□ 0.72
MSLN-207ENST00000566549 EFTUD2Q15029 972 aaKnown RBP eCLIP19.57■□□□□ 0.72
MSLN-207ENST00000566549 GPR162Q16538 588 aa19.57■□□□□ 0.72
MSLN-207ENST00000566549 IQSEC1Q6DN90 963 aa19.57■□□□□ 0.72
MSLN-207ENST00000566549 DARS2Q6PI48 645 aaKnown RBP19.57■□□□□ 0.72
MSLN-207ENST00000566549 PPIL6Q8IXY8 311 aa19.57■□□□□ 0.72
MSLN-207ENST00000566549 TMEM40Q8WWA1 233 aa19.57■□□□□ 0.72
MSLN-207ENST00000566549 DNAJB3Q8WWF6 145 aa19.57■□□□□ 0.72
MSLN-207ENST00000566549 TTC25Q96NG3 672 aa19.57■□□□□ 0.72
MSLN-207ENST00000566549 GBA2Q9HCG7 927 aaPredicted RBP19.57■□□□□ 0.72
MSLN-207ENST00000566549 EURLQ9NYK6 297 aa19.57■□□□□ 0.72
MSLN-207ENST00000566549 DNM1LO00429 736 aa19.57■□□□□ 0.72
MSLN-207ENST00000566549 ALOX15BO15296 676 aa19.57■□□□□ 0.72
MSLN-207ENST00000566549 TMEM63AO94886 807 aa19.57■□□□□ 0.72
MSLN-207ENST00000566549 HOXD8P13378 290 aaPredicted RBP19.57■□□□□ 0.72
MSLN-207ENST00000566549 KRT15P19012 456 aa19.57■□□□□ 0.72
MSLN-207ENST00000566549 SSTR1P30872 391 aa19.57■□□□□ 0.72
MSLN-207ENST00000566549 STX2P32856 288 aa19.57■□□□□ 0.72
MSLN-207ENST00000566549 PCK1P35558 622 aa19.57■□□□□ 0.72
MSLN-207ENST00000566549 DPYSL3Q14195 570 aa19.57■□□□□ 0.72
MSLN-207ENST00000566549 NUGGCQ68CJ6 796 aa19.57■□□□□ 0.72
MSLN-207ENST00000566549 NOTUMQ6P988 496 aa19.57■□□□□ 0.72
MSLN-207ENST00000566549 NT5DC4Q86YG4 428 aa19.57■□□□□ 0.72
MSLN-207ENST00000566549 RSAD1Q9HA92 442 aa19.57■□□□□ 0.72
MSLN-207ENST00000566549 GOLGA2P5Q9HBQ8 144 aa19.57■□□□□ 0.72
MSLN-207ENST00000566549 GGT7Q9UJ14 662 aa19.57■□□□□ 0.72
MSLN-207ENST00000566549 PIN4Q9Y237 131 aaKnown RBP19.57■□□□□ 0.72
MSLN-207ENST00000566549 ZSWIM8A7E2V4 1837 aa19.57■□□□□ 0.72
MSLN-207ENST00000566549 A8MXQ7 604 aa19.56■□□□□ 0.72
MSLN-207ENST00000566549 STAU1O95793 577 aaKnown RBP19.56■□□□□ 0.72
MSLN-207ENST00000566549 ADORA2BP29275 332 aa19.56■□□□□ 0.72
MSLN-207ENST00000566549 GPX6P59796 221 aa19.56■□□□□ 0.72
MSLN-207ENST00000566549 ANKRD20A8PQ5CZ79 823 aa19.56■□□□□ 0.72
MSLN-207ENST00000566549 OLFML1Q6UWY5 402 aa19.56■□□□□ 0.72
MSLN-207ENST00000566549 PIGWQ7Z7B1 504 aa19.56■□□□□ 0.72
MSLN-207ENST00000566549 C4orf33Q8N1A6 199 aa19.56■□□□□ 0.72
MSLN-207ENST00000566549 ANKS4BQ8N8V4 417 aa19.56■□□□□ 0.72
MSLN-207ENST00000566549 BEST2Q8NFU1 509 aa19.56■□□□□ 0.72
MSLN-207ENST00000566549 TRAF3IP1Q8TDR0 691 aaPredicted RBP19.56■□□□□ 0.72
MSLN-207ENST00000566549 CLEC4CQ8WTT0 213 aa19.56■□□□□ 0.72
MSLN-207ENST00000566549 FAM172AQ8WUF8 416 aa19.56■□□□□ 0.72
MSLN-207ENST00000566549 MAML1Q92585 1016 aa19.56■□□□□ 0.72
MSLN-207ENST00000566549 NKIRAS1Q9NYS0 192 aa19.56■□□□□ 0.72
MSLN-207ENST00000566549 RRN3P2A6NIE6 340 aa19.56■□□□□ 0.72
MSLN-207ENST00000566549 FSBPO95073 299 aa19.56■□□□□ 0.72
MSLN-207ENST00000566549 CPP00450 1065 aa19.56■□□□□ 0.72
MSLN-207ENST00000566549 CCDC130P13994 396 aa19.56■□□□□ 0.72
MSLN-207ENST00000566549 TFE3P19532 575 aaPredicted RBP19.56■□□□□ 0.72
MSLN-207ENST00000566549 ROR1Q01973 937 aa19.56■□□□□ 0.72
MSLN-207ENST00000566549 ACAP1Q15027 740 aa19.56■□□□□ 0.72
MSLN-207ENST00000566549 PKN2Q16513 984 aaKnown RBP19.56■□□□□ 0.72
MSLN-207ENST00000566549 FAM110CQ1W6H9 321 aa19.56■□□□□ 0.72
MSLN-207ENST00000566549 SOWAHAQ2M3V2 549 aa19.56■□□□□ 0.72
MSLN-207ENST00000566549 BBS9Q3SYG4 887 aa19.56■□□□□ 0.72
MSLN-207ENST00000566549 ZNF618Q5T7W0 954 aa19.56■□□□□ 0.72
MSLN-207ENST00000566549 NAT8LQ8N9F0 302 aa19.56■□□□□ 0.72
MSLN-207ENST00000566549 PYROXD1Q8WU10 500 aa19.56■□□□□ 0.72
MSLN-207ENST00000566549 P3H4Q92791 437 aa19.56■□□□□ 0.72
MSLN-207ENST00000566549 WDR83Q9BRX9 315 aaKnown RBP19.56■□□□□ 0.72
MSLN-207ENST00000566549 NSRP1Q9H0G5 558 aaKnown RBP19.56■□□□□ 0.72
MSLN-207ENST00000566549 RNF39Q9H2S5 420 aa19.56■□□□□ 0.72
MSLN-207ENST00000566549 HESX1Q9UBX0 185 aa19.56■□□□□ 0.72
MSLN-207ENST00000566549 XPO7Q9UIA9 1087 aaKnown RBP19.56■□□□□ 0.72
MSLN-207ENST00000566549 KIAA1257Q9ULG3 409 aa19.56■□□□□ 0.72
MSLN-207ENST00000566549 HEY1Q9Y5J3 304 aa19.56■□□□□ 0.72
MSLN-207ENST00000566549 CLUHO75153 1309 aa19.55■□□□□ 0.72
MSLN-207ENST00000566549 GABBR2O75899 941 aa19.55■□□□□ 0.72
MSLN-207ENST00000566549 CELF2O95319 508 aaKnown RBP19.55■□□□□ 0.72
MSLN-207ENST00000566549 ARL4CP56559 192 aa19.55■□□□□ 0.72
MSLN-207ENST00000566549 ACTN3Q08043 901 aaPredicted RBP19.55■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms