RNA–Protein interactions for RNA: ENST00000566307.1

LSM3P5-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 5, humanhuman

BASIC

Gene LSM3P5, Length 306 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P5-201ENST00000566307 NR2E1Q9Y466 385 aa9.31□□□□□ -0.92
LSM3P5-201ENST00000566307 hCG_1818297A0A087WSY0 165 aa9.3□□□□□ -0.92
LSM3P5-201ENST00000566307 GOLGA8SH3BPF8 625 aa9.3□□□□□ -0.92
LSM3P5-201ENST00000566307 ENPP3O14638 875 aa9.3□□□□□ -0.92
LSM3P5-201ENST00000566307 NBNO60934 754 aa9.3□□□□□ -0.92
LSM3P5-201ENST00000566307 TJP3O95049 919 aa9.3□□□□□ -0.92
LSM3P5-201ENST00000566307 GJB6O95452 261 aa9.3□□□□□ -0.92
LSM3P5-201ENST00000566307 PDGFRBP09619 1106 aa9.3□□□□□ -0.92
LSM3P5-201ENST00000566307 CDKN2BP42772 138 aa9.3□□□□□ -0.92
LSM3P5-201ENST00000566307 AFF1P51825 1210 aaKnown RBP9.3□□□□□ -0.92
LSM3P5-201ENST00000566307 RNASE9P60153 205 aaKnown RBP9.3□□□□□ -0.92
LSM3P5-201ENST00000566307 HTRA3P83110 453 aa9.3□□□□□ -0.92
LSM3P5-201ENST00000566307 DR1Q01658 176 aa9.3□□□□□ -0.92
LSM3P5-201ENST00000566307 GUCY2DQ02846 1103 aa9.3□□□□□ -0.92
LSM3P5-201ENST00000566307 LMNB2Q03252 620 aa9.3□□□□□ -0.92
LSM3P5-201ENST00000566307 MMRN1Q13201 1228 aa9.3□□□□□ -0.92
LSM3P5-201ENST00000566307 BOLA3Q53S33 107 aa9.3□□□□□ -0.92
LSM3P5-201ENST00000566307 TFDP3Q5H9I0 405 aa9.3□□□□□ -0.92
LSM3P5-201ENST00000566307 INTS6LQ5JSJ4 861 aaKnown RBP9.3□□□□□ -0.92
LSM3P5-201ENST00000566307 RAB41Q5JT25 222 aa9.3□□□□□ -0.92
LSM3P5-201ENST00000566307 CLLU1OSQ5K130 101 aa9.3□□□□□ -0.92
LSM3P5-201ENST00000566307 OR6B2Q6IFH4 312 aa9.3□□□□□ -0.92
LSM3P5-201ENST00000566307 SPOCD1Q6ZMY3 1216 aa9.3□□□□□ -0.92
LSM3P5-201ENST00000566307 BEND5Q7L4P6 421 aa9.3□□□□□ -0.92
LSM3P5-201ENST00000566307 BNIPLQ7Z465 357 aa9.3□□□□□ -0.92
LSM3P5-201ENST00000566307 PHLDB2Q86SQ0 1253 aa9.3□□□□□ -0.92
LSM3P5-201ENST00000566307 JAMLQ86YT9 394 aa9.3□□□□□ -0.92
LSM3P5-201ENST00000566307 PSTKQ8IV42 348 aaKnown RBP9.3□□□□□ -0.92
LSM3P5-201ENST00000566307 COLGALT2Q8IYK4 626 aa9.3□□□□□ -0.92
LSM3P5-201ENST00000566307 ARFGAP1Q8N6T3 406 aa9.3□□□□□ -0.92
LSM3P5-201ENST00000566307 TTC13Q8NBP0 860 aa9.3□□□□□ -0.92
LSM3P5-201ENST00000566307 FAM71BQ8TC56 605 aa9.3□□□□□ -0.92
LSM3P5-201ENST00000566307 SLC2A14Q8TDB8 520 aa9.3□□□□□ -0.92
LSM3P5-201ENST00000566307 GRK7Q8WTQ7 553 aa9.3□□□□□ -0.92
LSM3P5-201ENST00000566307 CASKIN2Q8WXE0 1202 aa9.3□□□□□ -0.92
LSM3P5-201ENST00000566307 MAGOHBQ96A72 148 aaKnown RBP9.3□□□□□ -0.92
LSM3P5-201ENST00000566307 ARMC5Q96C12 935 aa9.3□□□□□ -0.92
LSM3P5-201ENST00000566307 DEFB118Q96PH6 123 aa9.3□□□□□ -0.92
LSM3P5-201ENST00000566307 ERP44Q9BS26 406 aa9.3□□□□□ -0.92
LSM3P5-201ENST00000566307 DDX23Q9BUQ8 820 aaKnown RBP9.3□□□□□ -0.92
LSM3P5-201ENST00000566307 DCLK3Q9C098 648 aa9.3□□□□□ -0.92
LSM3P5-201ENST00000566307 RNF208Q9H0X6 261 aa9.3□□□□□ -0.92
LSM3P5-201ENST00000566307 ACBD3Q9H3P7 528 aa9.3□□□□□ -0.92
LSM3P5-201ENST00000566307 EPB41L5Q9HCM4 733 aa9.3□□□□□ -0.92
LSM3P5-201ENST00000566307 CRTAC1Q9NQ79 661 aa9.3□□□□□ -0.92
LSM3P5-201ENST00000566307 ST7Q9NRC1 585 aa9.3□□□□□ -0.92
LSM3P5-201ENST00000566307 AMACRQ9UHK6 382 aa9.3□□□□□ -0.92
LSM3P5-201ENST00000566307 DRG1Q9Y295 367 aaKnown RBP9.3□□□□□ -0.92
LSM3P5-201ENST00000566307 UTP11Q9Y3A2 253 aaKnown RBP9.3□□□□□ -0.92
LSM3P5-201ENST00000566307 TTC3P53804 2025 aa9.3□□□□□ -0.92
LSM3P5-201ENST00000566307 CARNS1A5YM72 827 aa9.29□□□□□ -0.92
LSM3P5-201ENST00000566307 CASTOR2A6NHX0 329 aa9.29□□□□□ -0.92
LSM3P5-201ENST00000566307 C3orf70A6NLC5 250 aaPredicted RBP9.29□□□□□ -0.92
LSM3P5-201ENST00000566307 DCDC2CA8MYV0 355 aa9.29□□□□□ -0.92
LSM3P5-201ENST00000566307 TULP2O00295 520 aa9.29□□□□□ -0.92
LSM3P5-201ENST00000566307 NDC80O14777 642 aa9.29□□□□□ -0.92
LSM3P5-201ENST00000566307 SYN3O14994 580 aa9.29□□□□□ -0.92
LSM3P5-201ENST00000566307 MDM4O15151 490 aa9.29□□□□□ -0.92
LSM3P5-201ENST00000566307 TTI1O43156 1089 aa9.29□□□□□ -0.92
LSM3P5-201ENST00000566307 TRAPPC3O43617 180 aa9.29□□□□□ -0.92
LSM3P5-201ENST00000566307 HSF2BPO75031 334 aa9.29□□□□□ -0.92
LSM3P5-201ENST00000566307 DAB1O75553 588 aa9.29□□□□□ -0.92
LSM3P5-201ENST00000566307 B3GAT3O94766 335 aa9.29□□□□□ -0.92
LSM3P5-201ENST00000566307 SEC31AO94979 1220 aaKnown RBP9.29□□□□□ -0.92
LSM3P5-201ENST00000566307 OAZ2O95190 189 aa9.29□□□□□ -0.92
LSM3P5-201ENST00000566307 TRUB2O95900 331 aaKnown RBP9.29□□□□□ -0.92
LSM3P5-201ENST00000566307 KRT1P04264 644 aa9.29□□□□□ -0.92
LSM3P5-201ENST00000566307 FAM200BP0CF97 657 aa9.29□□□□□ -0.92
LSM3P5-201ENST00000566307 MYBL2P10244 700 aa9.29□□□□□ -0.92
LSM3P5-201ENST00000566307 CCDC130P13994 396 aa9.29□□□□□ -0.92
LSM3P5-201ENST00000566307 PDGFRAP16234 1089 aa9.29□□□□□ -0.92
LSM3P5-201ENST00000566307 ADORA2BP29275 332 aa9.29□□□□□ -0.92
LSM3P5-201ENST00000566307 TKTP29401 623 aaKnown RBP9.29□□□□□ -0.92
LSM3P5-201ENST00000566307 ECHS1P30084 290 aa9.29□□□□□ -0.92
LSM3P5-201ENST00000566307 MIPP30301 263 aa9.29□□□□□ -0.92
LSM3P5-201ENST00000566307 SDC4P31431 198 aa9.29□□□□□ -0.92
LSM3P5-201ENST00000566307 RFC2P35250 354 aa9.29□□□□□ -0.92
LSM3P5-201ENST00000566307 FLT3P36888 993 aa9.29□□□□□ -0.92
LSM3P5-201ENST00000566307 ARSEP51690 589 aa9.29□□□□□ -0.92
LSM3P5-201ENST00000566307 SLC7A5Q01650 507 aa9.29□□□□□ -0.92
LSM3P5-201ENST00000566307 CASP8Q14790 479 aa9.29□□□□□ -0.92
LSM3P5-201ENST00000566307 PDK2Q15119 407 aa9.29□□□□□ -0.92
LSM3P5-201ENST00000566307 MTFR1Q15390 333 aa9.29□□□□□ -0.92
LSM3P5-201ENST00000566307 PKN2Q16513 984 aaKnown RBP9.29□□□□□ -0.92
LSM3P5-201ENST00000566307 CCDC14Q49A88 953 aa9.29□□□□□ -0.92
LSM3P5-201ENST00000566307 KIAA0319Q5VV43 1072 aa9.29□□□□□ -0.92
LSM3P5-201ENST00000566307 TRNP1Q6NT89 227 aa9.29□□□□□ -0.92
LSM3P5-201ENST00000566307 AADACL2Q6P093 401 aa9.29□□□□□ -0.92
LSM3P5-201ENST00000566307 FBXO46Q6PJ61 603 aaPredicted RBP9.29□□□□□ -0.92
LSM3P5-201ENST00000566307 CCDC137Q6PK04 289 aaKnown RBP9.29□□□□□ -0.92
LSM3P5-201ENST00000566307 SLC39A5Q6ZMH5 540 aa9.29□□□□□ -0.92
LSM3P5-201ENST00000566307 CLEC20AQ6ZU45 233 aa9.29□□□□□ -0.92
LSM3P5-201ENST00000566307 BBS12Q6ZW61 710 aa9.29□□□□□ -0.92
LSM3P5-201ENST00000566307 STRADAQ7RTN6 431 aa9.29□□□□□ -0.92
LSM3P5-201ENST00000566307 FAM35AQ86V20 835 aa9.29□□□□□ -0.92
LSM3P5-201ENST00000566307 PIGZQ86VD9 579 aa9.29□□□□□ -0.92
LSM3P5-201ENST00000566307 THEM5Q8N1Q8 247 aa9.29□□□□□ -0.92
LSM3P5-201ENST00000566307 DBF4BQ8NFT6 615 aa9.29□□□□□ -0.92
LSM3P5-201ENST00000566307 ATL2Q8NHH9 583 aa9.29□□□□□ -0.92
LSM3P5-201ENST00000566307 CCHCR1Q8TD31 782 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms