RNA–Protein interactions for RNA: ENST00000566230.5

COMMD4-214, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 490 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-214ENST00000566230 SPATA18Q8TC71 538 aa14.31□□□□□ -0.12
COMMD4-214ENST00000566230 CACTINQ8WUQ7 758 aaKnown RBP14.31□□□□□ -0.12
COMMD4-214ENST00000566230 SPATA17Q96L03 361 aa14.31□□□□□ -0.12
COMMD4-214ENST00000566230 SPATA32Q96LK8 384 aa14.31□□□□□ -0.12
COMMD4-214ENST00000566230 RNF38Q9H0F5 515 aa14.31□□□□□ -0.12
COMMD4-214ENST00000566230 CUEDC2Q9H467 287 aa14.31□□□□□ -0.12
COMMD4-214ENST00000566230 CRTAC1Q9NQ79 661 aa14.31□□□□□ -0.12
COMMD4-214ENST00000566230 FAM13BQ9NYF5 915 aa14.31□□□□□ -0.12
COMMD4-214ENST00000566230 MBD1Q9UIS9 605 aaPredicted RBP14.31□□□□□ -0.12
COMMD4-214ENST00000566230 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa14.3□□□□□ -0.12
COMMD4-214ENST00000566230 GOLGA8IPA6NC78 632 aa14.3□□□□□ -0.12
COMMD4-214ENST00000566230 GOLGA8JA6NMD2 632 aa14.3□□□□□ -0.12
COMMD4-214ENST00000566230 SGK1O00141 431 aa14.3□□□□□ -0.12
COMMD4-214ENST00000566230 KLF8O95600 359 aaPredicted RBP14.3□□□□□ -0.12
COMMD4-214ENST00000566230 LMO2P25791 158 aa14.3□□□□□ -0.12
COMMD4-214ENST00000566230 PCSK1P29120 753 aa14.3□□□□□ -0.12
COMMD4-214ENST00000566230 STAT6P42226 847 aa14.3□□□□□ -0.12
COMMD4-214ENST00000566230 PTGER3P43115 390 aa14.3□□□□□ -0.12
COMMD4-214ENST00000566230 RBP5P82980 135 aa14.3□□□□□ -0.12
COMMD4-214ENST00000566230 AMPD3Q01432 767 aa14.3□□□□□ -0.12
COMMD4-214ENST00000566230 DHCR24Q15392 516 aa14.3□□□□□ -0.12
COMMD4-214ENST00000566230 TRIM61Q5EBN2 209 aa14.3□□□□□ -0.12
COMMD4-214ENST00000566230 L1TD1Q5T7N2 865 aaKnown RBP14.3□□□□□ -0.12
COMMD4-214ENST00000566230 KIAA1211LQ6NV74 962 aa14.3□□□□□ -0.12
COMMD4-214ENST00000566230 SHC4Q6S5L8 630 aa14.3□□□□□ -0.12
COMMD4-214ENST00000566230 FILIP1Q7Z7B0 1213 aa14.3□□□□□ -0.12
COMMD4-214ENST00000566230 TMEFF1Q8IYR6 380 aa14.3□□□□□ -0.12
COMMD4-214ENST00000566230 IL17RCQ8NAC3 791 aa14.3□□□□□ -0.12
COMMD4-214ENST00000566230 TXNDC5Q8NBS9 432 aaKnown RBP14.3□□□□□ -0.12
COMMD4-214ENST00000566230 KBTBD7Q8WVZ9 684 aa14.3□□□□□ -0.12
COMMD4-214ENST00000566230 DNAJC19Q96DA6 116 aa14.3□□□□□ -0.12
COMMD4-214ENST00000566230 PDE11AQ9HCR9 933 aa14.3□□□□□ -0.12
COMMD4-214ENST00000566230 RBAKQ9NYW8 714 aaPredicted RBP14.3□□□□□ -0.12
COMMD4-214ENST00000566230 TBC1D7Q9P0N9 293 aa14.3□□□□□ -0.12
COMMD4-214ENST00000566230 MAGEC2Q9UBF1 373 aaPredicted RBP14.3□□□□□ -0.12
COMMD4-214ENST00000566230 ITGA11Q9UKX5 1188 aa14.3□□□□□ -0.12
COMMD4-214ENST00000566230 A0A0A0MRY4 1105 aa14.29□□□□□ -0.12
COMMD4-214ENST00000566230 ZNF840PA6NDX5 716 aa14.29□□□□□ -0.12
COMMD4-214ENST00000566230 MYMKA6NI61 221 aa14.29□□□□□ -0.12
COMMD4-214ENST00000566230 TNFRSF10BO14763 440 aa14.29□□□□□ -0.12
COMMD4-214ENST00000566230 SCAMP3O14828 347 aaKnown RBP14.29□□□□□ -0.12
COMMD4-214ENST00000566230 HYAL3O43820 417 aaPredicted RBP14.29□□□□□ -0.12
COMMD4-214ENST00000566230 KRT19P08727 400 aa14.29□□□□□ -0.12
COMMD4-214ENST00000566230 PFKLP17858 780 aa14.29□□□□□ -0.12
COMMD4-214ENST00000566230 BDNFP23560 247 aa14.29□□□□□ -0.12
COMMD4-214ENST00000566230 CMA1P23946 247 aa14.29□□□□□ -0.12
COMMD4-214ENST00000566230 TIE1P35590 1138 aa14.29□□□□□ -0.12
COMMD4-214ENST00000566230 ANP32AP39687 249 aaKnown RBP14.29□□□□□ -0.12
COMMD4-214ENST00000566230 KIR2DL1P43626 348 aaPredicted RBP14.29□□□□□ -0.12
COMMD4-214ENST00000566230 MAPK8P45983 427 aa14.29□□□□□ -0.12
COMMD4-214ENST00000566230 CASP5P51878 434 aa14.29□□□□□ -0.12
COMMD4-214ENST00000566230 PSMC1P62191 440 aaKnown RBP14.29□□□□□ -0.12
COMMD4-214ENST00000566230 SLC7A9P82251 487 aa14.29□□□□□ -0.12
COMMD4-214ENST00000566230 LMAN2Q12907 356 aa14.29□□□□□ -0.12
COMMD4-214ENST00000566230 MAP7D1Q3KQU3 841 aa14.29□□□□□ -0.12
COMMD4-214ENST00000566230 RESP18Q5W5W9 173 aa14.29□□□□□ -0.12
COMMD4-214ENST00000566230 RHBDF2Q6PJF5 856 aa14.29□□□□□ -0.12
COMMD4-214ENST00000566230 C4orf50Q6ZRC1 276 aa14.29□□□□□ -0.12
COMMD4-214ENST00000566230 ARMCX6Q7L4S7 300 aa14.29□□□□□ -0.12
COMMD4-214ENST00000566230 LPCAT2Q7L5N7 544 aa14.29□□□□□ -0.12
COMMD4-214ENST00000566230 PIP4P1Q86T03 277 aa14.29□□□□□ -0.12
COMMD4-214ENST00000566230 C12orf40Q86WS4 652 aa14.29□□□□□ -0.12
COMMD4-214ENST00000566230 SYT12Q8IV01 421 aa14.29□□□□□ -0.12
COMMD4-214ENST00000566230 PDILTQ8N807 584 aa14.29□□□□□ -0.12
COMMD4-214ENST00000566230 ZCCHC14Q8WYQ9 949 aaKnown RBP14.29□□□□□ -0.12
COMMD4-214ENST00000566230 MYLPFQ96A32 169 aa14.29□□□□□ -0.12
COMMD4-214ENST00000566230 ACCSQ96QU6 501 aa14.29□□□□□ -0.12
COMMD4-214ENST00000566230 PNKPQ96T60 521 aa14.29□□□□□ -0.12
COMMD4-214ENST00000566230 SYT15Q9BQS2 421 aa14.29□□□□□ -0.12
COMMD4-214ENST00000566230 CBWD1Q9BRT8 395 aa14.29□□□□□ -0.12
COMMD4-214ENST00000566230 TTLL2Q9BWV7 592 aa14.29□□□□□ -0.12
COMMD4-214ENST00000566230 NUSAP1Q9BXS6 441 aaKnown RBP14.29□□□□□ -0.12
COMMD4-214ENST00000566230 MTMR12Q9C0I1 747 aa14.29□□□□□ -0.12
COMMD4-214ENST00000566230 MRPL44Q9H9J2 332 aaKnown RBP14.29□□□□□ -0.12
COMMD4-214ENST00000566230 ZDHHC4Q9NPG8 344 aa14.29□□□□□ -0.12
COMMD4-214ENST00000566230 TRPM5Q9NZQ8 1165 aa14.29□□□□□ -0.12
COMMD4-214ENST00000566230 EXOC7Q9UPT5 735 aa14.29□□□□□ -0.12
COMMD4-214ENST00000566230 SPAARA0A1B0GVQ0 90 aa14.28□□□□□ -0.12
COMMD4-214ENST00000566230 MAP3K13O43283 966 aa14.28□□□□□ -0.12
COMMD4-214ENST00000566230 ADAM23O75077 832 aa14.28□□□□□ -0.12
COMMD4-214ENST00000566230 ALDH1A2O94788 518 aa14.28□□□□□ -0.12
COMMD4-214ENST00000566230 KAT7O95251 611 aa14.28□□□□□ -0.12
COMMD4-214ENST00000566230 OLFM2O95897 454 aa14.28□□□□□ -0.12
COMMD4-214ENST00000566230 LDHAP00338 332 aaKnown RBP14.28□□□□□ -0.12
COMMD4-214ENST00000566230 PDGFRBP09619 1106 aa14.28□□□□□ -0.12
COMMD4-214ENST00000566230 ENGP17813 658 aa14.28□□□□□ -0.12
COMMD4-214ENST00000566230 GARTP22102 1010 aa14.28□□□□□ -0.12
COMMD4-214ENST00000566230 GRIK1P39086 918 aa14.28□□□□□ -0.12
COMMD4-214ENST00000566230 PDE6CP51160 858 aa14.28□□□□□ -0.12
COMMD4-214ENST00000566230 PTPRJQ12913 1337 aa14.28□□□□□ -0.12
COMMD4-214ENST00000566230 SEMA3BQ13214 749 aa14.28□□□□□ -0.12
COMMD4-214ENST00000566230 LMBRD2Q68DH5 695 aaPredicted RBP14.28□□□□□ -0.12
COMMD4-214ENST00000566230 VSTM1Q6UX27 236 aa14.28□□□□□ -0.12
COMMD4-214ENST00000566230 DENND5BQ6ZUT9 1274 aa14.28□□□□□ -0.12
COMMD4-214ENST00000566230 DPH6Q7L8W6 267 aa14.28□□□□□ -0.12
COMMD4-214ENST00000566230 KIAA1958Q8N8K9 716 aa14.28□□□□□ -0.12
COMMD4-214ENST00000566230 WHAMMQ8TF30 809 aa14.28□□□□□ -0.12
COMMD4-214ENST00000566230 PCDH15Q96QU1 1955 aa14.28□□□□□ -0.12
COMMD4-214ENST00000566230 FGFBP2Q9BYJ0 223 aa14.28□□□□□ -0.12
COMMD4-214ENST00000566230 PCIF1Q9H4Z3 704 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms