RNA–Protein interactions for RNA: ENST00000566029.5

CHD9-218, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD9, Length 13,110 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-218ENST00000566029 MTA2O94776 668 aa3.03□□□□□ -1.92
CHD9-218ENST00000566029 TGDSO95455 350 aa3.03□□□□□ -1.92
CHD9-218ENST00000566029 CAPNS1P04632 268 aa3.03□□□□□ -1.92
CHD9-218ENST00000566029 ALDH6A1Q02252 535 aaKnown RBP3.03□□□□□ -1.92
CHD9-218ENST00000566029 PPP2R5CQ13362 524 aa3.03□□□□□ -1.92
CHD9-218ENST00000566029 KCTD19Q17RG1 926 aaPredicted RBP3.03□□□□□ -1.92
CHD9-218ENST00000566029 GFOD2Q3B7J2 385 aa3.03□□□□□ -1.92
CHD9-218ENST00000566029 LRRC8BQ6P9F7 803 aa3.03□□□□□ -1.92
CHD9-218ENST00000566029 DCDC5Q6ZRR9 648 aa3.03□□□□□ -1.92
CHD9-218ENST00000566029 MFSD4AQ8N468 514 aa3.03□□□□□ -1.92
CHD9-218ENST00000566029 NGDNQ8NEJ9 315 aaKnown RBP3.03□□□□□ -1.92
CHD9-218ENST00000566029 ADCY4Q8NFM4 1077 aa3.03□□□□□ -1.92
CHD9-218ENST00000566029 UBASH3BQ8TF42 649 aa3.03□□□□□ -1.92
CHD9-218ENST00000566029 FAM161BQ96MY7 647 aa3.03□□□□□ -1.92
CHD9-218ENST00000566029 SENP1Q9P0U3 644 aa3.03□□□□□ -1.92
CHD9-218ENST00000566029 MAP2P11137 1827 aaKnown RBP3.03□□□□□ -1.92
CHD9-218ENST00000566029 TCRBV7S2A1N4TA0A589 114 aa3.03□□□□□ -1.92
CHD9-218ENST00000566029 TTC34A8MYJ7 566 aa3.03□□□□□ -1.92
CHD9-218ENST00000566029 K7EPI3 171 aa3.03□□□□□ -1.92
CHD9-218ENST00000566029 RGS20O76081 388 aa3.03□□□□□ -1.92
CHD9-218ENST00000566029 FBXO21O94952 628 aa3.03□□□□□ -1.92
CHD9-218ENST00000566029 PLEKHA8P1O95397 391 aa3.03□□□□□ -1.92
CHD9-218ENST00000566029 ZNF23P17027 643 aa3.03□□□□□ -1.92
CHD9-218ENST00000566029 CCNCP24863 283 aa3.03□□□□□ -1.92
CHD9-218ENST00000566029 LSM12Q3MHD2 195 aaKnown RBP3.03□□□□□ -1.92
CHD9-218ENST00000566029 HEATR3Q7Z4Q2 680 aa3.03□□□□□ -1.92
CHD9-218ENST00000566029 PROM2Q8N271 834 aa3.03□□□□□ -1.92
CHD9-218ENST00000566029 ZNF366Q8N895 744 aa3.03□□□□□ -1.92
CHD9-218ENST00000566029 RBM15BQ8NDT2 890 aaKnown RBP3.03□□□□□ -1.92
CHD9-218ENST00000566029 CALML6Q8TD86 181 aa3.03□□□□□ -1.92
CHD9-218ENST00000566029 MCUR1Q96AQ8 359 aa3.03□□□□□ -1.92
CHD9-218ENST00000566029 RANBP9Q96S59 729 aa3.03□□□□□ -1.92
CHD9-218ENST00000566029 RSL24D1Q9UHA3 163 aaKnown RBP3.03□□□□□ -1.92
CHD9-218ENST00000566029 GSTTP1A0A1W2PQM5 241 aa3.03□□□□□ -1.92
CHD9-218ENST00000566029 TCRBV5S4A2TA0A5A2 114 aa3.03□□□□□ -1.92
CHD9-218ENST00000566029 CAPN14A8MX76 684 aa3.03□□□□□ -1.92
CHD9-218ENST00000566029 GOLGA8SH3BPF8 625 aa3.03□□□□□ -1.92
CHD9-218ENST00000566029 ATP2A1O14983 1001 aa3.03□□□□□ -1.92
CHD9-218ENST00000566029 ADCY6O43306 1168 aa3.03□□□□□ -1.92
CHD9-218ENST00000566029 PDE8AO60658 829 aa3.03□□□□□ -1.92
CHD9-218ENST00000566029 APOEP02649 317 aa3.03□□□□□ -1.92
CHD9-218ENST00000566029 PCCAP05165 728 aaPredicted RBP3.03□□□□□ -1.92
CHD9-218ENST00000566029 ESRRAP11474 423 aaPredicted RBP3.03□□□□□ -1.92
CHD9-218ENST00000566029 TATP17735 454 aaPredicted RBP3.03□□□□□ -1.92
CHD9-218ENST00000566029 PLCG1P19174 1290 aa3.03□□□□□ -1.92
CHD9-218ENST00000566029 PCBP1Q15365 356 aaKnown RBP eCLIP3.03□□□□□ -1.929e-6■■■■■ 29.7
CHD9-218ENST00000566029 EFHC2Q5JST6 749 aa3.03□□□□□ -1.92
CHD9-218ENST00000566029 ZNF772Q68DY9 489 aaPredicted RBP3.03□□□□□ -1.92
CHD9-218ENST00000566029 CPNE8Q86YQ8 564 aa3.03□□□□□ -1.92
CHD9-218ENST00000566029 HPS3Q969F9 1004 aa3.03□□□□□ -1.92
CHD9-218ENST00000566029 PLEKHA8Q96JA3 519 aa3.03□□□□□ -1.92
CHD9-218ENST00000566029 PANX3Q96QZ0 392 aa3.03□□□□□ -1.92
CHD9-218ENST00000566029 FHDC1Q9C0D6 1143 aaPredicted RBP3.03□□□□□ -1.92
CHD9-218ENST00000566029 CHRAC1Q9NRG0 131 aa3.03□□□□□ -1.92
CHD9-218ENST00000566029 QPCTLQ9NXS2 382 aa3.03□□□□□ -1.92
CHD9-218ENST00000566029 FAM50BQ9Y247 325 aa3.03□□□□□ -1.92
CHD9-218ENST00000566029 LRRIQ4A6NIV6 560 aa3.03□□□□□ -1.92
CHD9-218ENST00000566029 TYROBPO43914 113 aa3.03□□□□□ -1.92
CHD9-218ENST00000566029 MGEA5O60502 916 aa3.03□□□□□ -1.92
CHD9-218ENST00000566029 CYP2C9P11712 490 aa3.03□□□□□ -1.92
CHD9-218ENST00000566029 ITIH2P19823 946 aa3.03□□□□□ -1.92
CHD9-218ENST00000566029 ST13P50502 369 aaKnown RBP3.03□□□□□ -1.92
CHD9-218ENST00000566029 STAT2P52630 851 aa3.03□□□□□ -1.92
CHD9-218ENST00000566029 AQP4P55087 323 aa3.03□□□□□ -1.92
CHD9-218ENST00000566029 IRX4P78413 519 aa3.03□□□□□ -1.92
CHD9-218ENST00000566029 TROAPQ12815 778 aa3.03□□□□□ -1.92
CHD9-218ENST00000566029 MAPK6Q16659 721 aa3.03□□□□□ -1.92
CHD9-218ENST00000566029 BTBD8Q5XKL5 378 aa3.03□□□□□ -1.92
CHD9-218ENST00000566029 CENPUQ71F23 418 aa3.03□□□□□ -1.92
CHD9-218ENST00000566029 ZNF34Q8IZ26 560 aa3.03□□□□□ -1.92
CHD9-218ENST00000566029 ZFP28Q8NHY6 868 aa3.03□□□□□ -1.92
CHD9-218ENST00000566029 ACTRT2Q8TDY3 377 aa3.03□□□□□ -1.92
CHD9-218ENST00000566029 RAD54LQ92698 747 aa3.03□□□□□ -1.92
CHD9-218ENST00000566029 SGF29Q96ES7 293 aa3.03□□□□□ -1.92
CHD9-218ENST00000566029 LRRC37BQ96QE4 947 aa3.03□□□□□ -1.92
CHD9-218ENST00000566029 MTMR12Q9C0I1 747 aa3.03□□□□□ -1.92
CHD9-218ENST00000566029 KIAA1586Q9HCI6 787 aa3.03□□□□□ -1.92
CHD9-218ENST00000566029 SH3GLB2Q9NR46 395 aa3.03□□□□□ -1.92
CHD9-218ENST00000566029 WHRNQ9P202 907 aa3.03□□□□□ -1.92
CHD9-218ENST00000566029 V9GYQ6 96 aa3.03□□□□□ -1.92
CHD9-218ENST00000566029 H3BNX3 289 aa3.03□□□□□ -1.93
CHD9-218ENST00000566029 H3BRJ5 948 aa3.03□□□□□ -1.93
CHD9-218ENST00000566029 SCAMP3O14828 347 aaKnown RBP3.03□□□□□ -1.93
CHD9-218ENST00000566029 ADCY3O60266 1144 aa3.03□□□□□ -1.93
CHD9-218ENST00000566029 THRAP10827 490 aa3.03□□□□□ -1.93
CHD9-218ENST00000566029 UBL4AP11441 157 aa3.03□□□□□ -1.93
CHD9-218ENST00000566029 VCLP18206 1134 aa3.03□□□□□ -1.93
CHD9-218ENST00000566029 PIK3CBP42338 1070 aa3.03□□□□□ -1.93
CHD9-218ENST00000566029 TIMM10P62072 90 aa3.03□□□□□ -1.93
CHD9-218ENST00000566029 EGFLAMQ63HQ2 1017 aa3.03□□□□□ -1.93
CHD9-218ENST00000566029 DENND6AQ8IWF6 608 aa3.03□□□□□ -1.93
CHD9-218ENST00000566029 KIAA0895Q8NCT3 520 aa3.03□□□□□ -1.93
CHD9-218ENST00000566029 SMG7Q92540 1137 aaKnown RBP3.03□□□□□ -1.93
CHD9-218ENST00000566029 GPATCH1Q9BRR8 931 aaKnown RBP3.03□□□□□ -1.93
CHD9-218ENST00000566029 HAUS8Q9BT25 410 aa3.03□□□□□ -1.93
CHD9-218ENST00000566029 SHCBP1LQ9BZQ2 653 aa3.03□□□□□ -1.93
CHD9-218ENST00000566029 INTS2Q9H0H0 1204 aaKnown RBP3.03□□□□□ -1.93
CHD9-218ENST00000566029 TBC1D23Q9NUY8 699 aa3.03□□□□□ -1.93
CHD9-218ENST00000566029 SLC30A1Q9Y6M5 507 aa3.03□□□□□ -1.93
CHD9-218ENST00000566029 ASTN2O75129 1339 aaPredicted RBP3.03□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms