RNA–Protein interactions for RNA: ENST00000565834.1

COMMD4-213, Transcript of COMM domain containing 4, humanhuman

TSL 5

Gene COMMD4, Length 1,671 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-213ENST00000565834 TKTL1P51854 596 aa19.71■□□□□ 0.75
COMMD4-213ENST00000565834 PAPD7Q5XG87 772 aaKnown RBP19.71■□□□□ 0.75
COMMD4-213ENST00000565834 VSTM1Q6UX27 236 aa19.71■□□□□ 0.75
COMMD4-213ENST00000565834 KLHL23Q8NBE8 558 aa19.71■□□□□ 0.75
COMMD4-213ENST00000565834 JOSD2Q8TAC2 188 aa19.71■□□□□ 0.75
COMMD4-213ENST00000565834 SPPL2BQ8TCT7 592 aa19.71■□□□□ 0.75
COMMD4-213ENST00000565834 C2orf15Q8WU43 125 aaKnown RBP19.71■□□□□ 0.75
COMMD4-213ENST00000565834 PIWIL1Q96J94 861 aaKnown RBP19.71■□□□□ 0.75
COMMD4-213ENST00000565834 PACSIN2Q9UNF0 486 aaPredicted RBP19.71■□□□□ 0.75
COMMD4-213ENST00000565834 MTMR11A4FU01 709 aa19.7■□□□□ 0.74
COMMD4-213ENST00000565834 SPOPO43791 374 aa19.7■□□□□ 0.74
COMMD4-213ENST00000565834 FBXO21O94952 628 aa19.7■□□□□ 0.74
COMMD4-213ENST00000565834 COMTP21964 271 aa19.7■□□□□ 0.74
COMMD4-213ENST00000565834 OR1D2P34982 312 aa19.7■□□□□ 0.74
COMMD4-213ENST00000565834 BMPR1AP36894 532 aa19.7■□□□□ 0.74
COMMD4-213ENST00000565834 ROR1Q01973 937 aa19.7■□□□□ 0.74
COMMD4-213ENST00000565834 RPS6KA1Q15418 735 aa19.7■□□□□ 0.74
COMMD4-213ENST00000565834 RAB41Q5JT25 222 aa19.7■□□□□ 0.74
COMMD4-213ENST00000565834 RNF19BQ6ZMZ0 732 aa19.7■□□□□ 0.74
COMMD4-213ENST00000565834 GPRIN1Q7Z2K8 1008 aa19.7■□□□□ 0.74
COMMD4-213ENST00000565834 SCN4BQ8IWT1 228 aa19.7■□□□□ 0.74
COMMD4-213ENST00000565834 ATAD1Q8NBU5 361 aa19.7■□□□□ 0.74
COMMD4-213ENST00000565834 GADD45GIP1Q8TAE8 222 aaPredicted RBP19.7■□□□□ 0.74
COMMD4-213ENST00000565834 CLEC4CQ8WTT0 213 aa19.7■□□□□ 0.74
COMMD4-213ENST00000565834 MRPL17Q9NRX2 175 aaKnown RBP19.7■□□□□ 0.74
COMMD4-213ENST00000565834 LAMA2P24043 3122 aaKnown RBP19.69■□□□□ 0.74
COMMD4-213ENST00000565834 LINC01553A4QN01 128 aa19.69■□□□□ 0.74
COMMD4-213ENST00000565834 TRIM66O15016 1216 aa19.69■□□□□ 0.74
COMMD4-213ENST00000565834 ADAM12O43184 909 aa19.69■□□□□ 0.74
COMMD4-213ENST00000565834 SLC1A1P43005 524 aa19.69■□□□□ 0.74
COMMD4-213ENST00000565834 RNASE9P60153 205 aaKnown RBP19.69■□□□□ 0.74
COMMD4-213ENST00000565834 AMPD2Q01433 879 aa19.69■□□□□ 0.74
COMMD4-213ENST00000565834 SLC26A9Q7LBE3 791 aa19.69■□□□□ 0.74
COMMD4-213ENST00000565834 GPR65Q8IYL9 337 aa19.69■□□□□ 0.74
COMMD4-213ENST00000565834 EMC1Q8N766 993 aa19.69■□□□□ 0.74
COMMD4-213ENST00000565834 FNIP1Q8TF40 1166 aa19.69■□□□□ 0.74
COMMD4-213ENST00000565834 UBE2Q2Q8WVN8 375 aa19.69■□□□□ 0.74
COMMD4-213ENST00000565834 CLSTN3Q9BQT9 956 aa19.69■□□□□ 0.74
COMMD4-213ENST00000565834 ZBP1Q9H171 429 aa19.69■□□□□ 0.74
COMMD4-213ENST00000565834 TMEM59LQ9UK28 342 aa19.69■□□□□ 0.74
COMMD4-213ENST00000565834 SNX12Q9UMY4 172 aa19.69■□□□□ 0.74
COMMD4-213ENST00000565834 SAR1BQ9Y6B6 198 aa19.69■□□□□ 0.74
COMMD4-213ENST00000565834 WDR27A2RRH5 827 aa19.68■□□□□ 0.74
COMMD4-213ENST00000565834 GRXCR1A8MXD5 290 aa19.68■□□□□ 0.74
COMMD4-213ENST00000565834 GRAP2O75791 330 aa19.68■□□□□ 0.74
COMMD4-213ENST00000565834 DNAJB2P25686 324 aa19.68■□□□□ 0.74
COMMD4-213ENST00000565834 MAN1A1P33908 653 aa19.68■□□□□ 0.74
COMMD4-213ENST00000565834 NDUFV1P49821 464 aa19.68■□□□□ 0.74
COMMD4-213ENST00000565834 DNA2P51530 1060 aa19.68■□□□□ 0.74
COMMD4-213ENST00000565834 MRPS5P82675 430 aaKnown RBP19.68■□□□□ 0.74
COMMD4-213ENST00000565834 OGDHQ02218 1023 aa19.68■□□□□ 0.74
COMMD4-213ENST00000565834 ADCY1Q08828 1119 aa19.68■□□□□ 0.74
COMMD4-213ENST00000565834 ZNF252P-AS1Q0IIN9 211 aa19.68■□□□□ 0.74
COMMD4-213ENST00000565834 PIGHQ14442 188 aaPredicted RBP19.68■□□□□ 0.74
COMMD4-213ENST00000565834 EFHC1Q5JVL4 640 aa19.68■□□□□ 0.74
COMMD4-213ENST00000565834 FAM109BQ6ICB4 259 aaPredicted RBP19.68■□□□□ 0.74
COMMD4-213ENST00000565834 HES6Q96HZ4 224 aa19.68■□□□□ 0.74
COMMD4-213ENST00000565834 C8orf48Q96LL4 319 aa19.68■□□□□ 0.74
COMMD4-213ENST00000565834 PLVAPQ9BX97 442 aa19.68■□□□□ 0.74
COMMD4-213ENST00000565834 ULBP1Q9BZM6 244 aa19.68■□□□□ 0.74
COMMD4-213ENST00000565834 UBE2OQ9C0C9 1292 aaKnown RBP19.68■□□□□ 0.74
COMMD4-213ENST00000565834 CNGB3Q9NQW8 809 aa19.68■□□□□ 0.74
COMMD4-213ENST00000565834 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP19.68■□□□□ 0.74
COMMD4-213ENST00000565834 SSX2IPQ9Y2D8 614 aa19.68■□□□□ 0.74
COMMD4-213ENST00000565834 SART1O43290 800 aaKnown RBP19.68■□□□□ 0.74
COMMD4-213ENST00000565834 PSMA2P25787 234 aa19.68■□□□□ 0.74
COMMD4-213ENST00000565834 CREMQ03060 361 aa19.68■□□□□ 0.74
COMMD4-213ENST00000565834 TAF5Q15542 800 aa19.68■□□□□ 0.74
COMMD4-213ENST00000565834 CPNE8Q86YQ8 564 aa19.68■□□□□ 0.74
COMMD4-213ENST00000565834 AUTS2Q8WXX7 1259 aa19.68■□□□□ 0.74
COMMD4-213ENST00000565834 MYO16Q9Y6X6 1858 aa19.67■□□□□ 0.74
COMMD4-213ENST00000565834 MIF4GDA9UHW6 222 aaKnown RBP19.67■□□□□ 0.74
COMMD4-213ENST00000565834 VNN2O95498 520 aa19.67■□□□□ 0.74
COMMD4-213ENST00000565834 CTSAP10619 480 aa19.67■□□□□ 0.74
COMMD4-213ENST00000565834 MYOGP15173 224 aa19.67■□□□□ 0.74
COMMD4-213ENST00000565834 PRLRP16471 622 aa19.67■□□□□ 0.74
COMMD4-213ENST00000565834 TCP1P17987 556 aaKnown RBP19.67■□□□□ 0.74
COMMD4-213ENST00000565834 GPD1P21695 349 aa19.67■□□□□ 0.74
COMMD4-213ENST00000565834 TUBB2AQ13885 445 aa19.67■□□□□ 0.74
COMMD4-213ENST00000565834 ARCQ7LC44 396 aa19.67■□□□□ 0.74
COMMD4-213ENST00000565834 TTC9BQ8N6N2 239 aa19.67■□□□□ 0.74
COMMD4-213ENST00000565834 NIPA2Q8N8Q9 360 aa19.67■□□□□ 0.74
COMMD4-213ENST00000565834 KHSRPQ92945 711 aaKnown RBP eCLIP19.67■□□□□ 0.74
COMMD4-213ENST00000565834 FAM149B1Q96BN6 582 aa19.67■□□□□ 0.74
COMMD4-213ENST00000565834 OSBPL9Q96SU4 736 aa19.67■□□□□ 0.74
COMMD4-213ENST00000565834 PSMB7Q99436 277 aa19.67■□□□□ 0.74
COMMD4-213ENST00000565834 SEPT5Q99719 369 aaPredicted RBP19.67■□□□□ 0.74
COMMD4-213ENST00000565834 TUBB2BQ9BVA1 445 aa19.67■□□□□ 0.74
COMMD4-213ENST00000565834 LZTS1Q9Y250 596 aa19.67■□□□□ 0.74
COMMD4-213ENST00000565834 USTQ9Y2C2 406 aa19.67■□□□□ 0.74
COMMD4-213ENST00000565834 SLC27A5Q9Y2P5 690 aa19.67■□□□□ 0.74
COMMD4-213ENST00000565834 C2CD4BA6NLJ0 364 aa19.66■□□□□ 0.74
COMMD4-213ENST00000565834 HSF2BPO75031 334 aa19.66■□□□□ 0.74
COMMD4-213ENST00000565834 ZBED1O96006 694 aa19.66■□□□□ 0.74
COMMD4-213ENST00000565834 HAPLN1P10915 354 aaPredicted RBP19.66■□□□□ 0.74
COMMD4-213ENST00000565834 PDGFRAP16234 1089 aa19.66■□□□□ 0.74
COMMD4-213ENST00000565834 FLT3P36888 993 aa19.66■□□□□ 0.74
COMMD4-213ENST00000565834 ZNF143P52747 638 aaPredicted RBP19.66■□□□□ 0.74
COMMD4-213ENST00000565834 SLC5A3P53794 718 aa19.66■□□□□ 0.74
COMMD4-213ENST00000565834 DAOAP59103 153 aa19.66■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms