RNA–Protein interactions for RNA: ENST00000565815.1

LINC00561-201, long intergenic non-protein coding RNA 561, humanhuman

BASIC

Gene LINC00561, Length 2,738 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00561-201ENST00000565815 PAWRQ96IZ0 340 aaKnown RBP4.89□□□□□ -1.63
LINC00561-201ENST00000565815 CRB3Q9BUF7 120 aa4.89□□□□□ -1.63
LINC00561-201ENST00000565815 BDH2Q9BUT1 245 aa4.89□□□□□ -1.63
LINC00561-201ENST00000565815 OGDHLQ9ULD0 1010 aa4.89□□□□□ -1.63
LINC00561-201ENST00000565815 SNED1Q8TER0 1413 aa4.89□□□□□ -1.63
LINC00561-201ENST00000565815 RBBP6Q7Z6E9 1792 aaKnown RBP4.89□□□□□ -1.63
LINC00561-201ENST00000565815 NPEPPSL1A6NEC2 478 aa4.89□□□□□ -1.63
LINC00561-201ENST00000565815 HAUS5O94927 633 aa4.89□□□□□ -1.63
LINC00561-201ENST00000565815 HSD11B2P80365 405 aa4.89□□□□□ -1.63
LINC00561-201ENST00000565815 GPSM2P81274 684 aa4.89□□□□□ -1.63
LINC00561-201ENST00000565815 FAM209BQ5JX69 171 aa4.89□□□□□ -1.63
LINC00561-201ENST00000565815 CERS3Q8IU89 383 aa4.89□□□□□ -1.63
LINC00561-201ENST00000565815 ZNF483Q8TF39 744 aaPredicted RBP4.89□□□□□ -1.63
LINC00561-201ENST00000565815 FRAT1Q92837 279 aaPredicted RBP4.89□□□□□ -1.63
LINC00561-201ENST00000565815 GJA10Q969M2 543 aa4.89□□□□□ -1.63
LINC00561-201ENST00000565815 DCPSQ96C86 337 aaKnown RBP4.89□□□□□ -1.63
LINC00561-201ENST00000565815 MTFMTQ96DP5 389 aaKnown RBP4.89□□□□□ -1.63
LINC00561-201ENST00000565815 CCDC138Q96M89 665 aa4.89□□□□□ -1.63
LINC00561-201ENST00000565815 PACSIN1Q9BY11 444 aa4.89□□□□□ -1.63
LINC00561-201ENST00000565815 RWDD1Q9H446 243 aaPredicted RBP4.89□□□□□ -1.63
LINC00561-201ENST00000565815 MYH16Q9H6N6 1097 aa4.89□□□□□ -1.63
LINC00561-201ENST00000565815 SARS2Q9NP81 518 aaKnown RBP4.89□□□□□ -1.63
LINC00561-201ENST00000565815 SRCAPQ6ZRS2 3230 aa4.89□□□□□ -1.63
LINC00561-201ENST00000565815 ZNF609O15014 1411 aa4.89□□□□□ -1.63
LINC00561-201ENST00000565815 A0A087WZ62 844 aa4.88□□□□□ -1.63
LINC00561-201ENST00000565815 CAPN14A8MX76 684 aa4.88□□□□□ -1.63
LINC00561-201ENST00000565815 NBNO60934 754 aa4.88□□□□□ -1.63
LINC00561-201ENST00000565815 FAM20BO75063 409 aa4.88□□□□□ -1.63
LINC00561-201ENST00000565815 BBOX1O75936 387 aa4.88□□□□□ -1.63
LINC00561-201ENST00000565815 EPS15P42566 896 aa4.88□□□□□ -1.63
LINC00561-201ENST00000565815 STT3AP46977 705 aa4.88□□□□□ -1.63
LINC00561-201ENST00000565815 SLC11A2P49281 568 aa4.88□□□□□ -1.63
LINC00561-201ENST00000565815 HTRA4P83105 476 aaPredicted RBP4.88□□□□□ -1.63
LINC00561-201ENST00000565815 NHLH2Q02577 135 aa4.88□□□□□ -1.63
LINC00561-201ENST00000565815 ZNF543Q08ER8 600 aa4.88□□□□□ -1.63
LINC00561-201ENST00000565815 TEFQ10587 303 aa4.88□□□□□ -1.63
LINC00561-201ENST00000565815 CNGB1Q14028 1251 aaPredicted RBP4.88□□□□□ -1.63
LINC00561-201ENST00000565815 C20orf194Q5TEA3 1177 aa4.88□□□□□ -1.63
LINC00561-201ENST00000565815 DCAF12L1Q5VU92 463 aa4.88□□□□□ -1.63
LINC00561-201ENST00000565815 FAM46DQ8NEK8 389 aa4.88□□□□□ -1.63
LINC00561-201ENST00000565815 IL17RDQ8NFM7 739 aa4.88□□□□□ -1.63
LINC00561-201ENST00000565815 PHKBQ93100 1093 aa4.88□□□□□ -1.63
LINC00561-201ENST00000565815 CFAP53Q96M91 514 aa4.88□□□□□ -1.63
LINC00561-201ENST00000565815 CHMP4BQ9H444 224 aaKnown RBP4.88□□□□□ -1.63
LINC00561-201ENST00000565815 BRD9Q9H8M2 597 aa4.88□□□□□ -1.63
LINC00561-201ENST00000565815 PPCSQ9HAB8 311 aa4.88□□□□□ -1.63
LINC00561-201ENST00000565815 CASP8AP2Q9UKL3 1982 aa4.88□□□□□ -1.63
LINC00561-201ENST00000565815 B5MCH6 92 aa4.88□□□□□ -1.63
LINC00561-201ENST00000565815 SLC43A1O75387 559 aa4.88□□□□□ -1.63
LINC00561-201ENST00000565815 PDHA1P08559 390 aa4.88□□□□□ -1.63
LINC00561-201ENST00000565815 SNRPA1P09661 255 aaKnown RBP4.88□□□□□ -1.63
LINC00561-201ENST00000565815 ACO1P21399 889 aaKnown RBP4.88□□□□□ -1.63
LINC00561-201ENST00000565815 SP2Q02086 613 aa4.88□□□□□ -1.63
LINC00561-201ENST00000565815 GRM1Q13255 1194 aa4.88□□□□□ -1.63
LINC00561-201ENST00000565815 KIF22Q14807 665 aa4.88□□□□□ -1.63
LINC00561-201ENST00000565815 FAM102AQ5T9C2 384 aaPredicted RBP4.88□□□□□ -1.63
LINC00561-201ENST00000565815 THEMIS2Q5TEJ8 643 aa4.88□□□□□ -1.63
LINC00561-201ENST00000565815 ERAP2Q6P179 960 aa4.88□□□□□ -1.63
LINC00561-201ENST00000565815 SPOCD1Q6ZMY3 1216 aa4.88□□□□□ -1.63
LINC00561-201ENST00000565815 PDZD4Q76G19 769 aaPredicted RBP4.88□□□□□ -1.63
LINC00561-201ENST00000565815 POF1BQ8WVV4 589 aa4.88□□□□□ -1.63
LINC00561-201ENST00000565815 PARD6AQ9NPB6 346 aa4.88□□□□□ -1.63
LINC00561-201ENST00000565815 PIH1D1Q9NWS0 290 aaKnown RBP4.88□□□□□ -1.63
LINC00561-201ENST00000565815 IL16Q14005 1332 aa4.88□□□□□ -1.63
LINC00561-201ENST00000565815 KIF16BQ96L93 1317 aa4.88□□□□□ -1.63
LINC00561-201ENST00000565815 PATE3B3GLJ2 98 aa4.88□□□□□ -1.63
LINC00561-201ENST00000565815 RASA4BC9J798 803 aa4.88□□□□□ -1.63
LINC00561-201ENST00000565815 hCG_1984214I3L0E3 225 aa4.88□□□□□ -1.63
LINC00561-201ENST00000565815 PPIP5K2O43314 1243 aa4.88□□□□□ -1.63
LINC00561-201ENST00000565815 RASA4O43374 803 aa4.88□□□□□ -1.63
LINC00561-201ENST00000565815 MGEA5O60502 916 aa4.88□□□□□ -1.63
LINC00561-201ENST00000565815 NDST3O95803 873 aa4.88□□□□□ -1.63
LINC00561-201ENST00000565815 PLATP00750 562 aa4.88□□□□□ -1.63
LINC00561-201ENST00000565815 HARSP12081 509 aaKnown RBP4.88□□□□□ -1.63
LINC00561-201ENST00000565815 PARP10Q53GL7 1025 aa4.88□□□□□ -1.63
LINC00561-201ENST00000565815 SULT6B1Q6IMI4 303 aa4.88□□□□□ -1.63
LINC00561-201ENST00000565815 C1orf228Q6PIY5 440 aa4.88□□□□□ -1.63
LINC00561-201ENST00000565815 LRRC46Q96FV0 321 aa4.88□□□□□ -1.63
LINC00561-201ENST00000565815 RBM15Q96T37 977 aaKnown RBP eCLIP4.88□□□□□ -1.63
LINC00561-201ENST00000565815 STK31Q9BXU1 1019 aa4.88□□□□□ -1.63
LINC00561-201ENST00000565815 LRRC27Q9C0I9 530 aa4.88□□□□□ -1.63
LINC00561-201ENST00000565815 WDCPQ9H6R7 721 aa4.88□□□□□ -1.63
LINC00561-201ENST00000565815 CERS4Q9HA82 394 aa4.88□□□□□ -1.63
LINC00561-201ENST00000565815 ZNF287Q9HBT7 754 aa4.88□□□□□ -1.63
LINC00561-201ENST00000565815 MRPS17Q9Y2R5 130 aaKnown RBP4.88□□□□□ -1.63
LINC00561-201ENST00000565815 PAPPA2Q9BXP8 1791 aa4.87□□□□□ -1.63
LINC00561-201ENST00000565815 CACNA1SQ13698 1873 aa4.87□□□□□ -1.63
LINC00561-201ENST00000565815 DCLK1O15075 740 aa4.87□□□□□ -1.63
LINC00561-201ENST00000565815 HTATSF1O43719 755 aaKnown RBP4.87□□□□□ -1.63
LINC00561-201ENST00000565815 PIP5K1CO60331 668 aa4.87□□□□□ -1.63
LINC00561-201ENST00000565815 IL12RB1P42701 662 aa4.87□□□□□ -1.63
LINC00561-201ENST00000565815 ZNF134P52741 427 aa4.87□□□□□ -1.63
LINC00561-201ENST00000565815 AK2P54819 239 aa4.87□□□□□ -1.63
LINC00561-201ENST00000565815 RNASE9P60153 205 aaKnown RBP4.87□□□□□ -1.63
LINC00561-201ENST00000565815 JAG1P78504 1218 aa4.87□□□□□ -1.63
LINC00561-201ENST00000565815 STK3Q13188 491 aa4.87□□□□□ -1.63
LINC00561-201ENST00000565815 ZIK1Q3SY52 487 aaPredicted RBP4.87□□□□□ -1.63
LINC00561-201ENST00000565815 PDCD4Q53EL6 469 aaKnown RBP4.87□□□□□ -1.63
LINC00561-201ENST00000565815 TSHZ3Q63HK5 1081 aa4.87□□□□□ -1.63
LINC00561-201ENST00000565815 ZNF790Q6PG37 636 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms