RNA–Protein interactions for RNA: ENST00000564676.5

CDH1-206, Transcript of cadherin 1, humanhuman

TSL 1 (best)

Gene CDH1, Length 969 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-206ENST00000564676 CELF5Q8N6W0 485 aaKnown RBP10.52□□□□□ -0.73
CDH1-206ENST00000564676 ARL14EPQ8N8R7 260 aaPredicted RBP10.52□□□□□ -0.73
CDH1-206ENST00000564676 SLC4A11Q8NBS3 891 aa10.52□□□□□ -0.73
CDH1-206ENST00000564676 TTC16Q8NEE8 873 aa10.52□□□□□ -0.73
CDH1-206ENST00000564676 ZMIZ2Q8NF64 920 aa10.52□□□□□ -0.73
CDH1-206ENST00000564676 SCAMP5Q8TAC9 235 aa10.52□□□□□ -0.73
CDH1-206ENST00000564676 LMO3Q8TAP4 145 aa10.52□□□□□ -0.73
CDH1-206ENST00000564676 BPIFB1Q8TDL5 484 aa10.52□□□□□ -0.73
CDH1-206ENST00000564676 RSPRY1Q96DX4 576 aa10.52□□□□□ -0.73
CDH1-206ENST00000564676 CYP2S1Q96SQ9 504 aa10.52□□□□□ -0.73
CDH1-206ENST00000564676 CRACR2AQ9BSW2 395 aa10.52□□□□□ -0.73
CDH1-206ENST00000564676 INTS2Q9H0H0 1204 aaKnown RBP10.52□□□□□ -0.73
CDH1-206ENST00000564676 TDP1Q9NUW8 608 aa10.52□□□□□ -0.73
CDH1-206ENST00000564676 ANO10Q9NW15 660 aa10.52□□□□□ -0.73
CDH1-206ENST00000564676 THG1LQ9NWX6 298 aaKnown RBP10.52□□□□□ -0.73
CDH1-206ENST00000564676 COMMD8Q9NX08 183 aa10.52□□□□□ -0.73
CDH1-206ENST00000564676 HCN4Q9Y3Q4 1203 aa10.52□□□□□ -0.73
CDH1-206ENST00000564676 ANAPC1Q9H1A4 1944 aa10.51□□□□□ -0.73
CDH1-206ENST00000564676 C2orf78A6NCI8 922 aa10.51□□□□□ -0.73
CDH1-206ENST00000564676 ZNF840PA6NDX5 716 aa10.51□□□□□ -0.73
CDH1-206ENST00000564676 PES1O00541 588 aaKnown RBP10.51□□□□□ -0.73
CDH1-206ENST00000564676 CHADO15335 359 aa10.51□□□□□ -0.73
CDH1-206ENST00000564676 PRKCSHP14314 528 aaPredicted RBP10.51□□□□□ -0.73
CDH1-206ENST00000564676 NPR3P17342 541 aa10.51□□□□□ -0.73
CDH1-206ENST00000564676 AVPR2P30518 371 aa10.51□□□□□ -0.73
CDH1-206ENST00000564676 CLCN5P51795 746 aa10.51□□□□□ -0.73
CDH1-206ENST00000564676 VCPP55072 806 aaKnown RBP10.51□□□□□ -0.73
CDH1-206ENST00000564676 SLC8A3P57103 927 aa10.51□□□□□ -0.73
CDH1-206ENST00000564676 PRKCQQ04759 706 aa10.51□□□□□ -0.73
CDH1-206ENST00000564676 STX1AQ16623 288 aa10.51□□□□□ -0.73
CDH1-206ENST00000564676 MAN2A1Q16706 1144 aa10.51□□□□□ -0.73
CDH1-206ENST00000564676 ARHGAP29Q52LW3 1261 aa10.51□□□□□ -0.73
CDH1-206ENST00000564676 SGO2Q562F6 1265 aa10.51□□□□□ -0.73
CDH1-206ENST00000564676 ARHGAP17Q68EM7 881 aa10.51□□□□□ -0.73
CDH1-206ENST00000564676 CC2D1AQ6P1N0 951 aaPredicted RBP10.51□□□□□ -0.73
CDH1-206ENST00000564676 CLEC20AQ6ZU45 233 aa10.51□□□□□ -0.73
CDH1-206ENST00000564676 ARHGEF19Q8IW93 802 aa10.51□□□□□ -0.73
CDH1-206ENST00000564676 PDZD8Q8NEN9 1154 aa10.51□□□□□ -0.73
CDH1-206ENST00000564676 ENOX1Q8TC92 643 aaKnown RBP10.51□□□□□ -0.73
CDH1-206ENST00000564676 CSGALNACT1Q8TDX6 532 aa10.51□□□□□ -0.73
CDH1-206ENST00000564676 DNASE1L2Q92874 299 aa10.51□□□□□ -0.73
CDH1-206ENST00000564676 KAT5Q92993 513 aa10.51□□□□□ -0.73
CDH1-206ENST00000564676 USP13Q92995 863 aaPredicted RBP10.51□□□□□ -0.73
CDH1-206ENST00000564676 LRRC3BQ96PB8 259 aa10.51□□□□□ -0.73
CDH1-206ENST00000564676 DUSP16Q9BY84 665 aa10.51□□□□□ -0.73
CDH1-206ENST00000564676 FBXO44Q9H4M3 255 aa10.51□□□□□ -0.73
CDH1-206ENST00000564676 TBC1D17Q9HA65 648 aa10.51□□□□□ -0.73
CDH1-206ENST00000564676 KIF9Q9HAQ2 790 aa10.51□□□□□ -0.73
CDH1-206ENST00000564676 CSNK1G1Q9HCP0 422 aa10.51□□□□□ -0.73
CDH1-206ENST00000564676 UBE2TQ9NPD8 197 aaPredicted RBP10.51□□□□□ -0.73
CDH1-206ENST00000564676 SAMSN1Q9NSI8 373 aaKnown RBP10.51□□□□□ -0.73
CDH1-206ENST00000564676 GCNT4Q9P109 453 aa10.51□□□□□ -0.73
CDH1-206ENST00000564676 CHORDC1Q9UHD1 332 aaPredicted RBP10.51□□□□□ -0.73
CDH1-206ENST00000564676 NFE2L3Q9Y4A8 694 aa10.51□□□□□ -0.73
CDH1-206ENST00000564676 NCANO14594 1321 aa10.51□□□□□ -0.73
CDH1-206ENST00000564676 OBSL1O75147 1896 aa10.51□□□□□ -0.73
CDH1-206ENST00000564676 NUP210Q8TEM1 1887 aaPredicted RBP10.51□□□□□ -0.73
CDH1-206ENST00000564676 F5P12259 2224 aa10.5□□□□□ -0.73
CDH1-206ENST00000564676 KCNJ18B7U540 433 aa10.5□□□□□ -0.73
CDH1-206ENST00000564676 TNFRSF10BO14763 440 aa10.5□□□□□ -0.73
CDH1-206ENST00000564676 VDRP11473 427 aa10.5□□□□□ -0.73
CDH1-206ENST00000564676 PFKLP17858 780 aa10.5□□□□□ -0.73
CDH1-206ENST00000564676 SLC9A1P19634 815 aa10.5□□□□□ -0.73
CDH1-206ENST00000564676 ACO1P21399 889 aaKnown RBP10.5□□□□□ -0.73
CDH1-206ENST00000564676 STARD6P59095 220 aa10.5□□□□□ -0.73
CDH1-206ENST00000564676 PLCB2Q00722 1185 aa10.5□□□□□ -0.73
CDH1-206ENST00000564676 GCNT1Q02742 428 aa10.5□□□□□ -0.73
CDH1-206ENST00000564676 FCHO2Q0JRZ9 810 aa10.5□□□□□ -0.73
CDH1-206ENST00000564676 PDAP1Q13442 181 aaKnown RBP10.5□□□□□ -0.73
CDH1-206ENST00000564676 KCNJ12Q14500 433 aa10.5□□□□□ -0.73
CDH1-206ENST00000564676 ZNF268Q14587 947 aaPredicted RBP10.5□□□□□ -0.73
CDH1-206ENST00000564676 EXOC3L4Q17RC7 722 aa10.5□□□□□ -0.73
CDH1-206ENST00000564676 GOLGA7BQ2TAP0 167 aa10.5□□□□□ -0.73
CDH1-206ENST00000564676 VWA3BQ502W6 1294 aa10.5□□□□□ -0.73
CDH1-206ENST00000564676 CWF19L1Q69YN2 538 aaKnown RBP10.5□□□□□ -0.73
CDH1-206ENST00000564676 PHLDB3Q6NSJ2 640 aa10.5□□□□□ -0.73
CDH1-206ENST00000564676 CAVIN1Q6NZI2 390 aaKnown RBP10.5□□□□□ -0.73
CDH1-206ENST00000564676 TPRG1Q6ZUI0 275 aa10.5□□□□□ -0.73
CDH1-206ENST00000564676 UBR7Q8N806 425 aa10.5□□□□□ -0.73
CDH1-206ENST00000564676 ANKRD52Q8NB46 1076 aa10.5□□□□□ -0.73
CDH1-206ENST00000564676 OVCA2Q8WZ82 227 aa10.5□□□□□ -0.73
CDH1-206ENST00000564676 ZFYVE19Q96K21 471 aa10.5□□□□□ -0.73
CDH1-206ENST00000564676 SLC22A12Q96S37 553 aa10.5□□□□□ -0.73
CDH1-206ENST00000564676 TUBGCP2Q9BSJ2 902 aa10.5□□□□□ -0.73
CDH1-206ENST00000564676 TRPV5Q9NQA5 729 aa10.5□□□□□ -0.73
CDH1-206ENST00000564676 HEBP1Q9NRV9 189 aa10.5□□□□□ -0.73
CDH1-206ENST00000564676 IL37Q9NZH6 218 aa10.5□□□□□ -0.73
CDH1-206ENST00000564676 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.5□□□□□ -0.73
CDH1-206ENST00000564676 GMIPQ9P107 970 aa10.5□□□□□ -0.73
CDH1-206ENST00000564676 TMEM63CQ9P1W3 806 aa10.5□□□□□ -0.73
CDH1-206ENST00000564676 HESX1Q9UBX0 185 aa10.5□□□□□ -0.73
CDH1-206ENST00000564676 RAPGEFL1Q9UHV5 662 aa10.5□□□□□ -0.73
CDH1-206ENST00000564676 KIAA1257Q9ULG3 409 aa10.5□□□□□ -0.73
CDH1-206ENST00000564676 CCL26Q9Y258 94 aa10.5□□□□□ -0.73
CDH1-206ENST00000564676 KANSL1LA0AUZ9 987 aa10.49□□□□□ -0.73
CDH1-206ENST00000564676 GTPBP10A4D1E9 387 aaKnown RBP10.49□□□□□ -0.73
CDH1-206ENST00000564676 HHLA1C9JL84 531 aa10.49□□□□□ -0.73
CDH1-206ENST00000564676 RNF225M0QZC1 329 aaPredicted RBP10.49□□□□□ -0.73
CDH1-206ENST00000564676 SNPHO15079 494 aa10.49□□□□□ -0.73
CDH1-206ENST00000564676 TPM2P07951 284 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms