RNA–Protein interactions for RNA: ENST00000564557.1

CNOT1-206, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-206ENST00000564557 KCNK16Q96T55 309 aa14.48□□□□□ -0.09
CNOT1-206ENST00000564557 HNRNPABQ99729 332 aaKnown RBP14.48□□□□□ -0.09
CNOT1-206ENST00000564557 TRPV5Q9NQA5 729 aa14.48□□□□□ -0.09
CNOT1-206ENST00000564557 COMMD8Q9NX08 183 aa14.48□□□□□ -0.09
CNOT1-206ENST00000564557 MYH10P35580 1976 aa14.47□□□□□ -0.09
CNOT1-206ENST00000564557 PMM2O15305 246 aa14.47□□□□□ -0.09
CNOT1-206ENST00000564557 PRAMEF12O95522 483 aa14.47□□□□□ -0.09
CNOT1-206ENST00000564557 PFKLP17858 780 aa14.47□□□□□ -0.09
CNOT1-206ENST00000564557 CACNA2D1P54289 1103 aa14.47□□□□□ -0.09
CNOT1-206ENST00000564557 USP46P62068 366 aa14.47□□□□□ -0.09
CNOT1-206ENST00000564557 ZNF268Q14587 947 aaPredicted RBP14.47□□□□□ -0.09
CNOT1-206ENST00000564557 PAQR9Q6ZVX9 377 aa14.47□□□□□ -0.09
CNOT1-206ENST00000564557 FAM114A1Q8IWE2 563 aa14.47□□□□□ -0.09
CNOT1-206ENST00000564557 PPM1KQ8N3J5 372 aa14.47□□□□□ -0.09
CNOT1-206ENST00000564557 ARL14EPQ8N8R7 260 aaPredicted RBP14.47□□□□□ -0.09
CNOT1-206ENST00000564557 USP13Q92995 863 aaPredicted RBP14.47□□□□□ -0.09
CNOT1-206ENST00000564557 JAKMIP2Q96AA8 810 aa14.47□□□□□ -0.09
CNOT1-206ENST00000564557 RSPRY1Q96DX4 576 aa14.47□□□□□ -0.09
CNOT1-206ENST00000564557 TWNKQ96RR1 684 aa14.47□□□□□ -0.09
CNOT1-206ENST00000564557 CYP2S1Q96SQ9 504 aa14.47□□□□□ -0.09
CNOT1-206ENST00000564557 TTLL2Q9BWV7 592 aa14.47□□□□□ -0.09
CNOT1-206ENST00000564557 NACA2Q9H009 215 aa14.47□□□□□ -0.09
CNOT1-206ENST00000564557 FBXO44Q9H4M3 255 aa14.47□□□□□ -0.09
CNOT1-206ENST00000564557 SCUBE2Q9NQ36 999 aa14.47□□□□□ -0.09
CNOT1-206ENST00000564557 PIAS3Q9Y6X2 628 aa14.47□□□□□ -0.09
CNOT1-206ENST00000564557 PTPRDP23468 1912 aa14.47□□□□□ -0.09
CNOT1-206ENST00000564557 ZDBF2Q9HCK1 2354 aa14.46□□□□□ -0.09
CNOT1-206ENST00000564557 ZNF840PA6NDX5 716 aa14.46□□□□□ -0.09
CNOT1-206ENST00000564557 FAM170BA6NMN3 283 aa14.46□□□□□ -0.09
CNOT1-206ENST00000564557 PI15O43692 258 aa14.46□□□□□ -0.09
CNOT1-206ENST00000564557 TADA3O75528 432 aa14.46□□□□□ -0.09
CNOT1-206ENST00000564557 DCNP07585 359 aaKnown RBP14.46□□□□□ -0.09
CNOT1-206ENST00000564557 GLULP15104 373 aa14.46□□□□□ -0.09
CNOT1-206ENST00000564557 CD19P15391 556 aa14.46□□□□□ -0.09
CNOT1-206ENST00000564557 CD72P21854 359 aa14.46□□□□□ -0.09
CNOT1-206ENST00000564557 MTIF2P46199 727 aaKnown RBP14.46□□□□□ -0.09
CNOT1-206ENST00000564557 SLC5A3P53794 718 aa14.46□□□□□ -0.09
CNOT1-206ENST00000564557 MARSP56192 900 aaKnown RBP14.46□□□□□ -0.09
CNOT1-206ENST00000564557 C1orf228Q6PIY5 440 aa14.46□□□□□ -0.09
CNOT1-206ENST00000564557 TRIM59Q8IWR1 403 aa14.46□□□□□ -0.09
CNOT1-206ENST00000564557 PJA1Q8NG27 643 aa14.46□□□□□ -0.09
CNOT1-206ENST00000564557 OVCA2Q8WZ82 227 aa14.46□□□□□ -0.09
CNOT1-206ENST00000564557 MSANTD3Q96H12 275 aa14.46□□□□□ -0.09
CNOT1-206ENST00000564557 ZFYVE19Q96K21 471 aa14.46□□□□□ -0.09
CNOT1-206ENST00000564557 CNOT6LQ96LI5 555 aaKnown RBP14.46□□□□□ -0.09
CNOT1-206ENST00000564557 SMOQ99835 787 aa14.46□□□□□ -0.09
CNOT1-206ENST00000564557 FOXQ1Q9C009 403 aa14.46□□□□□ -0.09
CNOT1-206ENST00000564557 C8orf33Q9H7E9 229 aaPredicted RBP14.46□□□□□ -0.09
CNOT1-206ENST00000564557 GKN1Q9NS71 199 aa14.46□□□□□ -0.09
CNOT1-206ENST00000564557 CHORDC1Q9UHD1 332 aaPredicted RBP14.46□□□□□ -0.09
CNOT1-206ENST00000564557 NUP210Q8TEM1 1887 aaPredicted RBP14.46□□□□□ -0.1
CNOT1-206ENST00000564557 C2orf78A6NCI8 922 aa14.45□□□□□ -0.1
CNOT1-206ENST00000564557 MBD3O95983 291 aa14.45□□□□□ -0.1
CNOT1-206ENST00000564557 ERCC5P28715 1186 aaPredicted RBP14.45□□□□□ -0.1
CNOT1-206ENST00000564557 IFNAR2P48551 515 aa14.45□□□□□ -0.1
CNOT1-206ENST00000564557 AMPD2Q01433 879 aa14.45□□□□□ -0.1
CNOT1-206ENST00000564557 PPP1R26Q5T8A7 1209 aaPredicted RBP14.45□□□□□ -0.1
CNOT1-206ENST00000564557 SASS6Q6UVJ0 657 aa14.45□□□□□ -0.1
CNOT1-206ENST00000564557 DTWD2Q8NBA8 298 aa14.45□□□□□ -0.1
CNOT1-206ENST00000564557 EHBP1Q8NDI1 1231 aa14.45□□□□□ -0.1
CNOT1-206ENST00000564557 SCAMP5Q8TAC9 235 aa14.45□□□□□ -0.1
CNOT1-206ENST00000564557 TTC8Q8TAM2 541 aa14.45□□□□□ -0.1
CNOT1-206ENST00000564557 WHAMMQ8TF30 809 aa14.45□□□□□ -0.1
CNOT1-206ENST00000564557 FAM3CQ92520 227 aa14.45□□□□□ -0.1
CNOT1-206ENST00000564557 ARID3AQ99856 593 aa14.45□□□□□ -0.1
CNOT1-206ENST00000564557 DUSP16Q9BY84 665 aa14.45□□□□□ -0.1
CNOT1-206ENST00000564557 OSBPL6Q9BZF3 934 aa14.45□□□□□ -0.1
CNOT1-206ENST00000564557 CSNK1G1Q9HCP0 422 aa14.45□□□□□ -0.1
CNOT1-206ENST00000564557 LTB4R2Q9NPC1 389 aa14.45□□□□□ -0.1
CNOT1-206ENST00000564557 TMEM30AQ9NV96 361 aa14.45□□□□□ -0.1
CNOT1-206ENST00000564557 HESX1Q9UBX0 185 aa14.45□□□□□ -0.1
CNOT1-206ENST00000564557 NDRG2Q9UN36 371 aaKnown RBP14.45□□□□□ -0.1
CNOT1-206ENST00000564557 CCL26Q9Y258 94 aa14.45□□□□□ -0.1
CNOT1-206ENST00000564557 PCDHB4Q9Y5E5 795 aa14.45□□□□□ -0.1
CNOT1-206ENST00000564557 DENND4CQ5VZ89 1909 aa14.45□□□□□ -0.1
CNOT1-206ENST00000564557 BEST1O76090 585 aa14.44□□□□□ -0.1
CNOT1-206ENST00000564557 MBL2P11226 248 aaPredicted RBP14.44□□□□□ -0.1
CNOT1-206ENST00000564557 ACO1P21399 889 aaKnown RBP14.44□□□□□ -0.1
CNOT1-206ENST00000564557 MAGEA9P43362 315 aa14.44□□□□□ -0.1
CNOT1-206ENST00000564557 RAD23BP54727 409 aa14.44□□□□□ -0.1
CNOT1-206ENST00000564557 MLLT6P55198 1093 aaPredicted RBP14.44□□□□□ -0.1
CNOT1-206ENST00000564557 NR1H3Q13133 447 aa14.44□□□□□ -0.1
CNOT1-206ENST00000564557 MTF1Q14872 753 aa14.44□□□□□ -0.1
CNOT1-206ENST00000564557 PDGFRLQ15198 375 aa14.44□□□□□ -0.1
CNOT1-206ENST00000564557 ITPRIPL2Q3MIP1 535 aa14.44□□□□□ -0.1
CNOT1-206ENST00000564557 DPCR1Q3MIW9 517 aa14.44□□□□□ -0.1
CNOT1-206ENST00000564557 SGO2Q562F6 1265 aa14.44□□□□□ -0.1
CNOT1-206ENST00000564557 CT47A1Q5JQC4 288 aaPredicted RBP14.44□□□□□ -0.1
CNOT1-206ENST00000564557 HECTD3Q5T447 861 aa14.44□□□□□ -0.1
CNOT1-206ENST00000564557 TMEM270Q6UE05 265 aa14.44□□□□□ -0.1
CNOT1-206ENST00000564557 CLEC20AQ6ZU45 233 aa14.44□□□□□ -0.1
CNOT1-206ENST00000564557 CCDC105Q8IYK2 499 aa14.44□□□□□ -0.1
CNOT1-206ENST00000564557 SLC4A11Q8NBS3 891 aa14.44□□□□□ -0.1
CNOT1-206ENST00000564557 SH3RF2Q8TEC5 729 aa14.44□□□□□ -0.1
CNOT1-206ENST00000564557 ATOH1Q92858 354 aaPredicted RBP14.44□□□□□ -0.1
CNOT1-206ENST00000564557 EXOC4Q96A65 974 aa14.44□□□□□ -0.1
CNOT1-206ENST00000564557 LRRC3BQ96PB8 259 aa14.44□□□□□ -0.1
CNOT1-206ENST00000564557 DDX23Q9BUQ8 820 aaKnown RBP14.44□□□□□ -0.1
CNOT1-206ENST00000564557 THAP9Q9H5L6 903 aa14.44□□□□□ -0.1
CNOT1-206ENST00000564557 TLR8Q9NR97 1041 aaKnown RBP14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms