RNA–Protein interactions for RNA: ENST00000564540.5

UBR1-205, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-205ENST00000564540 POLD3Q15054 466 aaPredicted RBP5.9□□□□□ -1.46
UBR1-205ENST00000564540 L1TD1Q5T7N2 865 aaKnown RBP5.9□□□□□ -1.46
UBR1-205ENST00000564540 CACHD1Q5VU97 1274 aa5.9□□□□□ -1.46
UBR1-205ENST00000564540 PPP4R4Q6NUP7 873 aa5.9□□□□□ -1.46
UBR1-205ENST00000564540 SESTD1Q86VW0 696 aa5.9□□□□□ -1.46
UBR1-205ENST00000564540 FMNL3Q8IVF7 1028 aa5.9□□□□□ -1.46
UBR1-205ENST00000564540 SPARTQ8N0X7 666 aa5.9□□□□□ -1.46
UBR1-205ENST00000564540 ABHD11Q8NFV4 315 aa5.9□□□□□ -1.46
UBR1-205ENST00000564540 CYP2W1Q8TAV3 490 aa5.9□□□□□ -1.46
UBR1-205ENST00000564540 APIPQ96GX9 242 aa5.9□□□□□ -1.46
UBR1-205ENST00000564540 PRR25Q96S07 402 aa5.9□□□□□ -1.46
UBR1-205ENST00000564540 PPP1R9BQ96SB3 815 aa5.9□□□□□ -1.46
UBR1-205ENST00000564540 DPCDQ9BVM2 203 aaPredicted RBP5.9□□□□□ -1.46
UBR1-205ENST00000564540 LRRC27Q9C0I9 530 aa5.9□□□□□ -1.46
UBR1-205ENST00000564540 XPNPEP3Q9NQH7 507 aa5.9□□□□□ -1.46
UBR1-205ENST00000564540 DNMT3BQ9UBC3 853 aaKnown RBP5.9□□□□□ -1.46
UBR1-205ENST00000564540 OGDHLQ9ULD0 1010 aa5.9□□□□□ -1.46
UBR1-205ENST00000564540 PCDHGB6Q9Y5F9 930 aa5.9□□□□□ -1.46
UBR1-205ENST00000564540 LOC102723971A0A1B0GUV8 181 aa5.89□□□□□ -1.47
UBR1-205ENST00000564540 PPM1GO15355 546 aaPredicted RBP5.89□□□□□ -1.47
UBR1-205ENST00000564540 TJP3O95049 919 aa5.89□□□□□ -1.47
UBR1-205ENST00000564540 IL1R1P14778 569 aa5.89□□□□□ -1.47
UBR1-205ENST00000564540 FPR3P25089 353 aa5.89□□□□□ -1.47
UBR1-205ENST00000564540 GRM1Q13255 1194 aa5.89□□□□□ -1.47
UBR1-205ENST00000564540 CCNIQ14094 377 aa5.89□□□□□ -1.47
UBR1-205ENST00000564540 CERCAMQ5T4B2 595 aa5.89□□□□□ -1.47
UBR1-205ENST00000564540 PRAMEF17Q5VTA0 474 aa5.89□□□□□ -1.47
UBR1-205ENST00000564540 CYB5RLQ6IPT4 315 aa5.89□□□□□ -1.47
UBR1-205ENST00000564540 ZNF66Q6ZN08 573 aa5.89□□□□□ -1.47
UBR1-205ENST00000564540 TIFAQ96CG3 184 aa5.89□□□□□ -1.47
UBR1-205ENST00000564540 THAP7Q9BT49 309 aaPredicted RBP5.89□□□□□ -1.47
UBR1-205ENST00000564540 ZNF287Q9HBT7 754 aa5.89□□□□□ -1.47
UBR1-205ENST00000564540 HDAC9Q9UKV0 1011 aa5.89□□□□□ -1.47
UBR1-205ENST00000564540 PAXBP1Q9Y5B6 917 aa5.89□□□□□ -1.47
UBR1-205ENST00000564540 DNAJC9-AS1A6NH13 148 aa5.88□□□□□ -1.47
UBR1-205ENST00000564540 RAB27BO00194 218 aa5.88□□□□□ -1.47
UBR1-205ENST00000564540 RRP9O43818 475 aaKnown RBP5.88□□□□□ -1.47
UBR1-205ENST00000564540 MGEA5O60502 916 aa5.88□□□□□ -1.47
UBR1-205ENST00000564540 EXOC3O60645 756 aa5.88□□□□□ -1.47
UBR1-205ENST00000564540 CELA2AP08217 269 aa5.88□□□□□ -1.47
UBR1-205ENST00000564540 RHCEP18577 417 aa5.88□□□□□ -1.47
UBR1-205ENST00000564540 LMO1P25800 156 aa5.88□□□□□ -1.47
UBR1-205ENST00000564540 PTDSS1P48651 473 aaKnown RBP5.88□□□□□ -1.47
UBR1-205ENST00000564540 BCAT1P54687 386 aa5.88□□□□□ -1.47
UBR1-205ENST00000564540 FAM193AP78312 1265 aa5.88□□□□□ -1.47
UBR1-205ENST00000564540 HOXA4Q00056 320 aaPredicted RBP5.88□□□□□ -1.47
UBR1-205ENST00000564540 RHDQ02161 417 aa5.88□□□□□ -1.47
UBR1-205ENST00000564540 SLC10A2Q12908 348 aaPredicted RBP5.88□□□□□ -1.47
UBR1-205ENST00000564540 NPY5RQ15761 445 aa5.88□□□□□ -1.47
UBR1-205ENST00000564540 INSCQ1MX18 579 aa5.88□□□□□ -1.47
UBR1-205ENST00000564540 KIRREL2Q6UWL6 708 aa5.88□□□□□ -1.47
UBR1-205ENST00000564540 ZBTB45Q96K62 511 aaPredicted RBP5.88□□□□□ -1.47
UBR1-205ENST00000564540 APOL5Q9BWW9 433 aa5.88□□□□□ -1.47
UBR1-205ENST00000564540 TRIM5Q9C035 493 aa5.88□□□□□ -1.47
UBR1-205ENST00000564540 DRG1Q9Y295 367 aaKnown RBP5.88□□□□□ -1.47
UBR1-205ENST00000564540 RGS10O43665 173 aa5.87□□□□□ -1.47
UBR1-205ENST00000564540 DLDP09622 509 aaKnown RBP5.87□□□□□ -1.47
UBR1-205ENST00000564540 HGFP14210 728 aa5.87□□□□□ -1.47
UBR1-205ENST00000564540 PRKAR1BP31321 381 aa5.87□□□□□ -1.47
UBR1-205ENST00000564540 SEMA5AQ13591 1074 aa5.87□□□□□ -1.47
UBR1-205ENST00000564540 TBC1D25Q3MII6 688 aa5.87□□□□□ -1.47
UBR1-205ENST00000564540 RNASE12Q5GAN4 147 aaKnown RBP5.87□□□□□ -1.47
UBR1-205ENST00000564540 FCRL6Q6DN72 434 aa5.87□□□□□ -1.47
UBR1-205ENST00000564540 TRIM72Q6ZMU5 477 aa5.87□□□□□ -1.47
UBR1-205ENST00000564540 CHSY1Q86X52 802 aa5.87□□□□□ -1.47
UBR1-205ENST00000564540 CHST8Q9H2A9 424 aa5.87□□□□□ -1.47
UBR1-205ENST00000564540 PRDM11Q9NQV5 511 aa5.87□□□□□ -1.47
UBR1-205ENST00000564540 FLRT1Q9NZU1 646 aa5.87□□□□□ -1.47
UBR1-205ENST00000564540 LPAR3Q9UBY5 353 aa5.87□□□□□ -1.47
UBR1-205ENST00000564540 MID2Q9UJV3 735 aa5.87□□□□□ -1.47
UBR1-205ENST00000564540 COL3A1P02461 1466 aaPredicted RBP5.87□□□□□ -1.47
UBR1-205ENST00000564540 CD3EAPO15446 510 aaKnown RBP5.86□□□□□ -1.47
UBR1-205ENST00000564540 CCP110O43303 1012 aa5.86□□□□□ -1.47
UBR1-205ENST00000564540 LATS1O95835 1130 aa5.86□□□□□ -1.47
UBR1-205ENST00000564540 PRKCBP05771 671 aa5.86□□□□□ -1.47
UBR1-205ENST00000564540 MPGP29372 298 aa5.86□□□□□ -1.47
UBR1-205ENST00000564540 UQCRC1P31930 480 aa5.86□□□□□ -1.47
UBR1-205ENST00000564540 PSG6Q00889 435 aa5.86□□□□□ -1.47
UBR1-205ENST00000564540 ARHGEF7Q14155 803 aa5.86□□□□□ -1.47
UBR1-205ENST00000564540 SLC29A2Q14542 456 aa5.86□□□□□ -1.47
UBR1-205ENST00000564540 UNC13DQ70J99 1090 aa5.86□□□□□ -1.47
UBR1-205ENST00000564540 VGLL2Q8N8G2 317 aa5.86□□□□□ -1.47
UBR1-205ENST00000564540 TERB1Q8NA31 727 aa5.86□□□□□ -1.47
UBR1-205ENST00000564540 PNLDC1Q8NA58 520 aaKnown RBP5.86□□□□□ -1.47
UBR1-205ENST00000564540 DAZAP1Q96EP5 407 aaKnown RBP5.86□□□□□ -1.47
UBR1-205ENST00000564540 SH2D3AQ9BRG2 576 aa5.86□□□□□ -1.47
UBR1-205ENST00000564540 CIPCQ9C0C6 399 aa5.86□□□□□ -1.47
UBR1-205ENST00000564540 ITGB1BP2Q9UKP3 347 aa5.86□□□□□ -1.47
UBR1-205ENST00000564540 PRRT4C9JH25 899 aa5.85□□□□□ -1.47
UBR1-205ENST00000564540 F8W8V4 182 aa5.85□□□□□ -1.47
UBR1-205ENST00000564540 AGPSO00116 658 aa5.85□□□□□ -1.47
UBR1-205ENST00000564540 PSMD9O00233 223 aa5.85□□□□□ -1.47
UBR1-205ENST00000564540 PMPCBO75439 489 aa5.85□□□□□ -1.47
UBR1-205ENST00000564540 PIAS2O75928 621 aa5.85□□□□□ -1.47
UBR1-205ENST00000564540 TXNP10599 105 aaKnown RBP5.85□□□□□ -1.47
UBR1-205ENST00000564540 CYP2D6P10635 497 aa5.85□□□□□ -1.47
UBR1-205ENST00000564540 CDK4P11802 303 aa5.85□□□□□ -1.47
UBR1-205ENST00000564540 ACVR2AP27037 513 aa5.85□□□□□ -1.47
UBR1-205ENST00000564540 GKP32189 559 aa5.85□□□□□ -1.47
UBR1-205ENST00000564540 ALDH5A1P51649 535 aaPredicted RBP5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms