RNA–Protein interactions for RNA: ENST00000564255.5

CHD9-209, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5

Gene CHD9, Length 2,896 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-209ENST00000564255 JUPP14923 745 aa2.96□□□□□ -1.94
CHD9-209ENST00000564255 FGFR4P22455 802 aa2.96□□□□□ -1.94
CHD9-209ENST00000564255 KLRK1P26718 216 aa2.96□□□□□ -1.94
CHD9-209ENST00000564255 HTR7P34969 479 aa2.96□□□□□ -1.94
CHD9-209ENST00000564255 MSX2P35548 267 aaPredicted RBP2.96□□□□□ -1.94
CHD9-209ENST00000564255 MC2RQ01718 297 aa2.96□□□□□ -1.94
CHD9-209ENST00000564255 GPS1Q13098 491 aa2.96□□□□□ -1.94
CHD9-209ENST00000564255 TRPC3Q13507 836 aa2.96□□□□□ -1.94
CHD9-209ENST00000564255 E2F2Q14209 437 aa2.96□□□□□ -1.94
CHD9-209ENST00000564255 CLCA4Q14CN2 919 aa2.96□□□□□ -1.94
CHD9-209ENST00000564255 MAP3K21Q5TCX8 1036 aa2.96□□□□□ -1.94
CHD9-209ENST00000564255 TSHZ3Q63HK5 1081 aa2.96□□□□□ -1.94
CHD9-209ENST00000564255 NFRKBQ6P4R8 1299 aa2.96□□□□□ -1.94
CHD9-209ENST00000564255 DSTYKQ6XUX3 929 aa2.96□□□□□ -1.94
CHD9-209ENST00000564255 POLNQ7Z5Q5 900 aa2.96□□□□□ -1.94
CHD9-209ENST00000564255 ANKRD35Q8N283 1001 aa2.96□□□□□ -1.94
CHD9-209ENST00000564255 CPT1CQ8TCG5 803 aa2.96□□□□□ -1.94
CHD9-209ENST00000564255 AFG1LQ8WV93 481 aa2.96□□□□□ -1.94
CHD9-209ENST00000564255 HDAC2Q92769 488 aaKnown RBP2.96□□□□□ -1.94
CHD9-209ENST00000564255 PPP2R3CQ969Q6 453 aa2.96□□□□□ -1.94
CHD9-209ENST00000564255 LRRC37BQ96QE4 947 aa2.96□□□□□ -1.94
CHD9-209ENST00000564255 INO80BQ9C086 356 aaPredicted RBP2.96□□□□□ -1.94
CHD9-209ENST00000564255 SMOC2Q9H3U7 446 aa2.96□□□□□ -1.94
CHD9-209ENST00000564255 JMJD4Q9H9V9 463 aa2.96□□□□□ -1.94
CHD9-209ENST00000564255 FSCN3Q9NQT6 498 aa2.96□□□□□ -1.94
CHD9-209ENST00000564255 C19orf53Q9UNZ5 99 aaPredicted RBP2.96□□□□□ -1.94
CHD9-209ENST00000564255 CHST2Q9Y4C5 530 aa2.96□□□□□ -1.94
CHD9-209ENST00000564255 A0A1B0GTW7 788 aa2.96□□□□□ -1.94
CHD9-209ENST00000564255 HMX3A6NHT5 357 aa2.96□□□□□ -1.94
CHD9-209ENST00000564255 GRXCR1A8MXD5 290 aa2.96□□□□□ -1.94
CHD9-209ENST00000564255 hCG_1984214I3L0E3 225 aa2.96□□□□□ -1.94
CHD9-209ENST00000564255 AGPSO00116 658 aa2.96□□□□□ -1.94
CHD9-209ENST00000564255 SRGAP2O75044 1071 aa2.96□□□□□ -1.94
CHD9-209ENST00000564255 RASAL1O95294 804 aa2.96□□□□□ -1.94
CHD9-209ENST00000564255 VIPP01282 170 aa2.96□□□□□ -1.94
CHD9-209ENST00000564255 SRGAP2BP0DMP2 458 aa2.96□□□□□ -1.94
CHD9-209ENST00000564255 HK1P19367 917 aa2.96□□□□□ -1.94
CHD9-209ENST00000564255 PXNP49023 591 aaPredicted RBP2.96□□□□□ -1.94
CHD9-209ENST00000564255 NR1H2P55055 460 aa2.96□□□□□ -1.94
CHD9-209ENST00000564255 OCA2Q04671 838 aa2.96□□□□□ -1.94
CHD9-209ENST00000564255 HLXQ14774 488 aaPredicted RBP2.96□□□□□ -1.94
CHD9-209ENST00000564255 GRM4Q14833 912 aa2.96□□□□□ -1.94
CHD9-209ENST00000564255 SMAD1Q15797 465 aaKnown RBP2.96□□□□□ -1.94
CHD9-209ENST00000564255 NRN1LQ496H8 165 aa2.96□□□□□ -1.94
CHD9-209ENST00000564255 VPS53Q5VIR6 699 aa2.96□□□□□ -1.94
CHD9-209ENST00000564255 RINT1Q6NUQ1 792 aa2.96□□□□□ -1.94
CHD9-209ENST00000564255 TMEM108Q6UXF1 575 aa2.96□□□□□ -1.94
CHD9-209ENST00000564255 Q6ZSN1 163 aa2.96□□□□□ -1.94
CHD9-209ENST00000564255 D2HGDHQ8N465 521 aa2.96□□□□□ -1.94
CHD9-209ENST00000564255 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP2.96□□□□□ -1.94
CHD9-209ENST00000564255 SUN3Q8TAQ9 357 aa2.96□□□□□ -1.94
CHD9-209ENST00000564255 ABHD5Q8WTS1 349 aa2.96□□□□□ -1.94
CHD9-209ENST00000564255 HTRA1Q92743 480 aa2.96□□□□□ -1.94
CHD9-209ENST00000564255 PHACTR3Q96KR7 559 aa2.96□□□□□ -1.94
CHD9-209ENST00000564255 COG8Q96MW5 612 aa2.96□□□□□ -1.94
CHD9-209ENST00000564255 GPR20Q99678 358 aa2.96□□□□□ -1.94
CHD9-209ENST00000564255 PAAF1Q9BRP4 392 aa2.96□□□□□ -1.94
CHD9-209ENST00000564255 EPS8L2Q9H6S3 715 aa2.96□□□□□ -1.94
CHD9-209ENST00000564255 TRIM36Q9NQ86 728 aa2.96□□□□□ -1.94
CHD9-209ENST00000564255 FBXO2Q9UK22 296 aaPredicted RBP2.96□□□□□ -1.94
CHD9-209ENST00000564255 DAPP1Q9UN19 280 aa2.96□□□□□ -1.94
CHD9-209ENST00000564255 ZFR2Q9UPR6 939 aaKnown RBP2.96□□□□□ -1.94
CHD9-209ENST00000564255 CNTN6Q9UQ52 1028 aa2.96□□□□□ -1.94
CHD9-209ENST00000564255 MRPS17Q9Y2R5 130 aaKnown RBP2.96□□□□□ -1.94
CHD9-209ENST00000564255 AATKQ6ZMQ8 1374 aa2.96□□□□□ -1.94
CHD9-209ENST00000564255 PNMA6EA0A0J9YXQ4 647 aa2.95□□□□□ -1.94
CHD9-209ENST00000564255 CCDC196A0A1B0GTZ2 297 aa2.95□□□□□ -1.94
CHD9-209ENST00000564255 FAM90A20PA6NIJ5 464 aa2.95□□□□□ -1.94
CHD9-209ENST00000564255 EFCAB8A8MWE9 144 aa2.95□□□□□ -1.94
CHD9-209ENST00000564255 E7EVH7 732 aa2.95□□□□□ -1.94
CHD9-209ENST00000564255 J3KTA2 159 aa2.95□□□□□ -1.94
CHD9-209ENST00000564255 LAMTOR5O43504 91 aa2.95□□□□□ -1.94
CHD9-209ENST00000564255 ZFPL1O95159 310 aa2.95□□□□□ -1.94
CHD9-209ENST00000564255 MBD4O95243 580 aa2.95□□□□□ -1.94
CHD9-209ENST00000564255 DDX58O95786 925 aaKnown RBP2.95□□□□□ -1.94
CHD9-209ENST00000564255 TFRCP02786 760 aaKnown RBP2.95□□□□□ -1.94
CHD9-209ENST00000564255 XBP1P17861 261 aa2.95□□□□□ -1.94
CHD9-209ENST00000564255 ITGALP20701 1170 aa2.95□□□□□ -1.94
CHD9-209ENST00000564255 UQCRC1P31930 480 aa2.95□□□□□ -1.94
CHD9-209ENST00000564255 MCM2P49736 904 aa2.95□□□□□ -1.94
CHD9-209ENST00000564255 PDE6CP51160 858 aa2.95□□□□□ -1.94
CHD9-209ENST00000564255 TIRAPP58753 221 aa2.95□□□□□ -1.94
CHD9-209ENST00000564255 JAG1P78504 1218 aa2.95□□□□□ -1.94
CHD9-209ENST00000564255 UBE3AQ05086 875 aa2.95□□□□□ -1.94
CHD9-209ENST00000564255 DYRK1AQ13627 763 aa2.95□□□□□ -1.94
CHD9-209ENST00000564255 CCNIQ14094 377 aa2.95□□□□□ -1.94
CHD9-209ENST00000564255 NBPF8Q3BBV2 869 aa2.95□□□□□ -1.94
CHD9-209ENST00000564255 TCERG1LQ5VWI1 586 aa2.95□□□□□ -1.94
CHD9-209ENST00000564255 FAAH2Q6GMR7 532 aa2.95□□□□□ -1.94
CHD9-209ENST00000564255 MAMDC4Q6UXC1 1216 aa2.95□□□□□ -1.94
CHD9-209ENST00000564255 RINLQ6ZS11 566 aa2.95□□□□□ -1.94
CHD9-209ENST00000564255 RASGRP2Q7LDG7 609 aa2.95□□□□□ -1.94
CHD9-209ENST00000564255 HEATR4Q86WZ0 1026 aa2.95□□□□□ -1.94
CHD9-209ENST00000564255 SPARTQ8N0X7 666 aa2.95□□□□□ -1.94
CHD9-209ENST00000564255 OR56A1Q8NGH5 318 aa2.95□□□□□ -1.94
CHD9-209ENST00000564255 WDR60Q8WVS4 1066 aa2.95□□□□□ -1.94
CHD9-209ENST00000564255 OR14A2Q96R54 314 aa2.95□□□□□ -1.94
CHD9-209ENST00000564255 DCLRE1CQ96SD1 692 aaKnown RBP2.95□□□□□ -1.94
CHD9-209ENST00000564255 REEP2Q9BRK0 252 aa2.95□□□□□ -1.94
CHD9-209ENST00000564255 ABHD16BQ9H3Z7 469 aa2.95□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms