RNA–Protein interactions for RNA: ENST00000563901.5

SH3GL3-205, Transcript of SH3 domain containing GRB2 like 3, endophilin A3, humanhuman

TSL 1 (best)

Gene SH3GL3, Length 1,647 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3GL3-205ENST00000563901 SLC5A3P53794 718 aa28.47■■■□□ 2.15
SH3GL3-205ENST00000563901 RPL10AP62906 217 aaKnown RBP28.47■■■□□ 2.15
SH3GL3-205ENST00000563901 ADIGQ0VDE8 80 aa28.47■■■□□ 2.15
SH3GL3-205ENST00000563901 ERICH1Q86X53 443 aa28.47■■■□□ 2.15
SH3GL3-205ENST00000563901 CLEC4CQ8WTT0 213 aa28.47■■■□□ 2.15
SH3GL3-205ENST00000563901 NDRG1Q92597 394 aaKnown RBP28.47■■■□□ 2.15
SH3GL3-205ENST00000563901 PPP2R3CQ969Q6 453 aa28.47■■■□□ 2.15
SH3GL3-205ENST00000563901 REXO2Q9Y3B8 237 aaKnown RBP28.47■■■□□ 2.15
SH3GL3-205ENST00000563901 CCL16O15467 120 aa28.46■■■□□ 2.15
SH3GL3-205ENST00000563901 PTP4A2Q12974 167 aa28.46■■■□□ 2.15
SH3GL3-205ENST00000563901 CCDC149Q6ZUS6 474 aa28.46■■■□□ 2.15
SH3GL3-205ENST00000563901 MON1BQ7L1V2 547 aa28.46■■■□□ 2.15
SH3GL3-205ENST00000563901 GAS2L1Q99501 681 aaPredicted RBP28.46■■■□□ 2.15
SH3GL3-205ENST00000563901 MIS12Q9H081 205 aa28.46■■■□□ 2.15
SH3GL3-205ENST00000563901 TFR2Q9UP52 801 aa28.46■■■□□ 2.15
SH3GL3-205ENST00000563901 SLC38A8A6NNN8 435 aa28.45■■■□□ 2.14
SH3GL3-205ENST00000563901 RTN2O75298 545 aa28.45■■■□□ 2.14
SH3GL3-205ENST00000563901 GZMAP12544 262 aa28.45■■■□□ 2.14
SH3GL3-205ENST00000563901 MMP8P22894 467 aa28.45■■■□□ 2.14
SH3GL3-205ENST00000563901 TKTL1P51854 596 aa28.45■■■□□ 2.14
SH3GL3-205ENST00000563901 PPM1LQ5SGD2 360 aa28.45■■■□□ 2.14
SH3GL3-205ENST00000563901 PHF13Q86YI8 300 aaPredicted RBP28.45■■■□□ 2.14
SH3GL3-205ENST00000563901 C12orf76Q8N812 135 aaPredicted RBP28.45■■■□□ 2.14
SH3GL3-205ENST00000563901 STK32AQ8WU08 396 aa28.45■■■□□ 2.14
SH3GL3-205ENST00000563901 KCTD13Q8WZ19 329 aa28.45■■■□□ 2.14
SH3GL3-205ENST00000563901 NOX5Q96PH1 765 aa28.45■■■□□ 2.14
SH3GL3-205ENST00000563901 CDCA3Q99618 268 aaPredicted RBP28.45■■■□□ 2.14
SH3GL3-205ENST00000563901 CDX2Q99626 313 aaPredicted RBP28.45■■■□□ 2.14
SH3GL3-205ENST00000563901 ISCUQ9H1K1 167 aa28.45■■■□□ 2.14
SH3GL3-205ENST00000563901 PLEKHA4Q9H4M7 779 aa28.45■■■□□ 2.14
SH3GL3-205ENST00000563901 SYNCQ9H7C4 482 aa28.45■■■□□ 2.14
SH3GL3-205ENST00000563901 LRRC4Q9HBW1 653 aa28.45■■■□□ 2.14
SH3GL3-205ENST00000563901 CHORDC1Q9UHD1 332 aaPredicted RBP28.45■■■□□ 2.14
SH3GL3-205ENST00000563901 C2orf16Q68DN1 1984 aa28.45■■■□□ 2.14
SH3GL3-205ENST00000563901 EIF3CLB5ME19 914 aaKnown RBP28.44■■■□□ 2.14
SH3GL3-205ENST00000563901 ARHGAP6O43182 974 aa28.44■■■□□ 2.14
SH3GL3-205ENST00000563901 ATMINO43313 823 aaPredicted RBP28.44■■■□□ 2.14
SH3GL3-205ENST00000563901 ZMYND10O75800 440 aa28.44■■■□□ 2.14
SH3GL3-205ENST00000563901 POU3F3P20264 500 aaPredicted RBP28.44■■■□□ 2.14
SH3GL3-205ENST00000563901 ABCB4P21439 1286 aa28.44■■■□□ 2.14
SH3GL3-205ENST00000563901 RPL34P49207 117 aaKnown RBP28.44■■■□□ 2.14
SH3GL3-205ENST00000563901 RAB41Q5JT25 222 aa28.44■■■□□ 2.14
SH3GL3-205ENST00000563901 SCUBE3Q8IX30 993 aa28.44■■■□□ 2.14
SH3GL3-205ENST00000563901 NUP93Q8N1F7 819 aa28.44■■■□□ 2.14
SH3GL3-205ENST00000563901 DEFB123Q8N688 67 aa28.44■■■□□ 2.14
SH3GL3-205ENST00000563901 SPATA17Q96L03 361 aa28.44■■■□□ 2.14
SH3GL3-205ENST00000563901 GUCD1Q96NT3 240 aa28.44■■■□□ 2.14
SH3GL3-205ENST00000563901 EIF3CQ99613 913 aaKnown RBP28.44■■■□□ 2.14
SH3GL3-205ENST00000563901 UBXN6Q9BZV1 441 aa28.44■■■□□ 2.14
SH3GL3-205ENST00000563901 PNPLA8Q9NP80 782 aa28.44■■■□□ 2.14
SH3GL3-205ENST00000563901 ADAM22Q9P0K1 906 aa28.44■■■□□ 2.14
SH3GL3-205ENST00000563901 MAGED2Q9UNF1 606 aaPredicted RBP28.44■■■□□ 2.14
SH3GL3-205ENST00000563901 LCA5LO95447 670 aa28.43■■■□□ 2.14
SH3GL3-205ENST00000563901 LRG1P02750 347 aa28.43■■■□□ 2.14
SH3GL3-205ENST00000563901 DENND5BQ6ZUT9 1274 aa28.43■■■□□ 2.14
SH3GL3-205ENST00000563901 TMEM110Q86TL2 294 aa28.43■■■□□ 2.14
SH3GL3-205ENST00000563901 MCOLN2Q8IZK6 566 aa28.43■■■□□ 2.14
SH3GL3-205ENST00000563901 PIWIL1Q96J94 861 aaKnown RBP28.43■■■□□ 2.14
SH3GL3-205ENST00000563901 HSFY1Q96LI6 401 aa28.43■■■□□ 2.14
SH3GL3-205ENST00000563901 ULBP1Q9BZM6 244 aa28.43■■■□□ 2.14
SH3GL3-205ENST00000563901 OBSL1O75147 1896 aa28.43■■■□□ 2.14
SH3GL3-205ENST00000563901 SPDYE4A6NLX3 237 aa28.43■■■□□ 2.14
SH3GL3-205ENST00000563901 PAPSS1O43252 624 aaPredicted RBP28.43■■■□□ 2.14
SH3GL3-205ENST00000563901 C1RP00736 705 aa28.43■■■□□ 2.14
SH3GL3-205ENST00000563901 EPHB3P54753 998 aa28.43■■■□□ 2.14
SH3GL3-205ENST00000563901 FAM183BPQ6ZVS7 135 aa28.43■■■□□ 2.14
SH3GL3-205ENST00000563901 EFHBQ8N7U6 833 aa28.43■■■□□ 2.14
SH3GL3-205ENST00000563901 USP17L7P0C7H9 530 aa28.42■■■□□ 2.14
SH3GL3-205ENST00000563901 GALCP54803 685 aa28.42■■■□□ 2.14
SH3GL3-205ENST00000563901 GPR153Q6NV75 609 aa28.42■■■□□ 2.14
SH3GL3-205ENST00000563901 XYLT1Q86Y38 959 aa28.42■■■□□ 2.14
SH3GL3-205ENST00000563901 SIX6OS1Q8N1H7 587 aa28.42■■■□□ 2.14
SH3GL3-205ENST00000563901 IPO4Q8TEX9 1081 aaKnown RBP28.42■■■□□ 2.14
SH3GL3-205ENST00000563901 C18orf8Q96DM3 657 aa28.42■■■□□ 2.14
SH3GL3-205ENST00000563901 APOL5Q9BWW9 433 aa28.42■■■□□ 2.14
SH3GL3-205ENST00000563901 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP28.42■■■□□ 2.14
SH3GL3-205ENST00000563901 A0A0U1RQJ8 604 aa28.41■■■□□ 2.14
SH3GL3-205ENST00000563901 GJB6O95452 261 aa28.41■■■□□ 2.14
SH3GL3-205ENST00000563901 HMGA1P17096 107 aaKnown RBP28.41■■■□□ 2.14
SH3GL3-205ENST00000563901 PLD1Q13393 1074 aa28.41■■■□□ 2.14
SH3GL3-205ENST00000563901 SPA17Q15506 151 aa28.41■■■□□ 2.14
SH3GL3-205ENST00000563901 ATRIPQ8WXE1 791 aa28.41■■■□□ 2.14
SH3GL3-205ENST00000563901 THAP2Q9H0W7 228 aa28.41■■■□□ 2.14
SH3GL3-205ENST00000563901 HCFC1R1Q9NWW0 138 aa28.41■■■□□ 2.14
SH3GL3-205ENST00000563901 PCDHA13Q9Y5I0 950 aa28.41■■■□□ 2.14
SH3GL3-205ENST00000563901 GOLGA8SH3BPF8 625 aa28.4■■■□□ 2.14
SH3GL3-205ENST00000563901 NRDCO43847 1150 aa28.4■■■□□ 2.14
SH3GL3-205ENST00000563901 RRM1P23921 792 aa28.4■■■□□ 2.14
SH3GL3-205ENST00000563901 GABRB2P47870 512 aa28.4■■■□□ 2.14
SH3GL3-205ENST00000563901 PGFP49763 221 aa28.4■■■□□ 2.14
SH3GL3-205ENST00000563901 C1QBPQ07021 282 aaKnown RBP28.4■■■□□ 2.14
SH3GL3-205ENST00000563901 VEPH1Q14D04 833 aa28.4■■■□□ 2.14
SH3GL3-205ENST00000563901 OR6B2Q6IFH4 312 aa28.4■■■□□ 2.14
SH3GL3-205ENST00000563901 DNAJB7Q7Z6W7 309 aaPredicted RBP28.4■■■□□ 2.14
SH3GL3-205ENST00000563901 HDAC7Q8WUI4 952 aa28.4■■■□□ 2.14
SH3GL3-205ENST00000563901 CASP10Q92851 521 aa28.4■■■□□ 2.14
SH3GL3-205ENST00000563901 ZNF653Q96CK0 615 aa28.4■■■□□ 2.14
SH3GL3-205ENST00000563901 ZNF334Q9HCZ1 680 aaPredicted RBP28.4■■■□□ 2.14
SH3GL3-205ENST00000563901 CYLDQ9NQC7 956 aa28.4■■■□□ 2.14
SH3GL3-205ENST00000563901 USP3Q9Y6I4 520 aa28.4■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms