RNA–Protein interactions for RNA: ENST00000563485.2

HMGB1P33-201, Transcript of high mobility group box 1 pseudogene 33, humanhuman

BASIC

Gene HMGB1P33, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P33-201ENST00000563485 THRAP3Q9Y2W1 955 aaKnown RBP4.12□□□□□ -1.75
HMGB1P33-201ENST00000563485 USP19O94966 1318 aa4.12□□□□□ -1.75
HMGB1P33-201ENST00000563485 TCRBV5S1A1TA0A578 114 aa4.11□□□□□ -1.75
HMGB1P33-201ENST00000563485 CAPN8A6NHC0 703 aa4.11□□□□□ -1.75
HMGB1P33-201ENST00000563485 PRPF3O43395 683 aaKnown RBP4.11□□□□□ -1.75
HMGB1P33-201ENST00000563485 CTNND1O60716 968 aaKnown RBP4.11□□□□□ -1.75
HMGB1P33-201ENST00000563485 TOP3BO95985 862 aaKnown RBP4.11□□□□□ -1.75
HMGB1P33-201ENST00000563485 CYP2A6P11509 494 aaPredicted RBP4.11□□□□□ -1.75
HMGB1P33-201ENST00000563485 CERKLQ49MI3 558 aaPredicted RBP4.11□□□□□ -1.75
HMGB1P33-201ENST00000563485 CERCAMQ5T4B2 595 aa4.11□□□□□ -1.75
HMGB1P33-201ENST00000563485 MIS18BP1Q6P0N0 1132 aa4.11□□□□□ -1.75
HMGB1P33-201ENST00000563485 DNAJB14Q8TBM8 379 aa4.11□□□□□ -1.75
HMGB1P33-201ENST00000563485 FCRL4Q96PJ5 515 aa4.11□□□□□ -1.75
HMGB1P33-201ENST00000563485 MMS19Q96T76 1030 aa4.11□□□□□ -1.75
HMGB1P33-201ENST00000563485 C22orf23Q9BZE7 217 aa4.11□□□□□ -1.75
HMGB1P33-201ENST00000563485 ZNF518BQ9C0D4 1074 aa4.11□□□□□ -1.75
HMGB1P33-201ENST00000563485 ASIC5Q9NY37 505 aa4.11□□□□□ -1.75
HMGB1P33-201ENST00000563485 STK32BQ9NY57 414 aa4.11□□□□□ -1.75
HMGB1P33-201ENST00000563485 LPAR3Q9UBY5 353 aa4.11□□□□□ -1.75
HMGB1P33-201ENST00000563485 NOB1Q9ULX3 412 aaKnown RBP4.11□□□□□ -1.75
HMGB1P33-201ENST00000563485 CDY1Q9Y6F8 540 aa4.11□□□□□ -1.75
HMGB1P33-201ENST00000563485 WDR17Q8IZU2 1322 aa4.11□□□□□ -1.75
HMGB1P33-201ENST00000563485 ZNF521Q96K83 1311 aa4.11□□□□□ -1.75
HMGB1P33-201ENST00000563485 CYP2D7A0A087X1C5 515 aa4.1□□□□□ -1.75
HMGB1P33-201ENST00000563485 MOSPD3O75425 235 aa4.1□□□□□ -1.75
HMGB1P33-201ENST00000563485 BCAR3O75815 825 aa4.1□□□□□ -1.75
HMGB1P33-201ENST00000563485 USP1O94782 785 aa4.1□□□□□ -1.75
HMGB1P33-201ENST00000563485 FGAP02671 866 aa4.1□□□□□ -1.75
HMGB1P33-201ENST00000563485 CHRM5P08912 532 aaPredicted RBP4.1□□□□□ -1.75
HMGB1P33-201ENST00000563485 ITGB6P18564 788 aa4.1□□□□□ -1.75
HMGB1P33-201ENST00000563485 GKP32189 559 aa4.1□□□□□ -1.75
HMGB1P33-201ENST00000563485 BCAT1P54687 386 aa4.1□□□□□ -1.75
HMGB1P33-201ENST00000563485 CCNIQ14094 377 aa4.1□□□□□ -1.75
HMGB1P33-201ENST00000563485 DAZAP2Q15038 168 aaPredicted RBP4.1□□□□□ -1.75
HMGB1P33-201ENST00000563485 CNN3Q15417 329 aaKnown RBP4.1□□□□□ -1.75
HMGB1P33-201ENST00000563485 ODR4Q5SWX8 454 aa4.1□□□□□ -1.75
HMGB1P33-201ENST00000563485 LCE1AQ5T7P2 110 aa4.1□□□□□ -1.75
HMGB1P33-201ENST00000563485 CACHD1Q5VU97 1274 aa4.1□□□□□ -1.75
HMGB1P33-201ENST00000563485 APOA5Q6Q788 366 aa4.1□□□□□ -1.75
HMGB1P33-201ENST00000563485 BCDIN3DQ7Z5W3 292 aaKnown RBP4.1□□□□□ -1.75
HMGB1P33-201ENST00000563485 KCTD20Q7Z5Y7 419 aa4.1□□□□□ -1.75
HMGB1P33-201ENST00000563485 MICU3Q86XE3 530 aa4.1□□□□□ -1.75
HMGB1P33-201ENST00000563485 SPARTQ8N0X7 666 aa4.1□□□□□ -1.75
HMGB1P33-201ENST00000563485 SIRT6Q8N6T7 355 aa4.1□□□□□ -1.75
HMGB1P33-201ENST00000563485 C9orf106Q8NAJ2 232 aa4.1□□□□□ -1.75
HMGB1P33-201ENST00000563485 RSPRY1Q96DX4 576 aa4.1□□□□□ -1.75
HMGB1P33-201ENST00000563485 VPS16Q9H269 839 aa4.1□□□□□ -1.75
HMGB1P33-201ENST00000563485 TMEM60Q9H2L4 133 aa4.1□□□□□ -1.75
HMGB1P33-201ENST00000563485 CPNE7Q9UBL6 633 aa4.1□□□□□ -1.75
HMGB1P33-201ENST00000563485 AMFRQ9UKV5 643 aa4.1□□□□□ -1.75
HMGB1P33-201ENST00000563485 DRG1Q9Y295 367 aaKnown RBP4.1□□□□□ -1.75
HMGB1P33-201ENST00000563485 FAM227AF5H4B4 570 aa4.09□□□□□ -1.75
HMGB1P33-201ENST00000563485 UBE2Q2LH0YL09 131 aa4.09□□□□□ -1.75
HMGB1P33-201ENST00000563485 CES2O00748 559 aa4.09□□□□□ -1.75
HMGB1P33-201ENST00000563485 PPEF2O14830 753 aa4.09□□□□□ -1.75
HMGB1P33-201ENST00000563485 SRGAP2O75044 1071 aa4.09□□□□□ -1.75
HMGB1P33-201ENST00000563485 PMPCBO75439 489 aa4.09□□□□□ -1.75
HMGB1P33-201ENST00000563485 BMP15O95972 392 aa4.09□□□□□ -1.75
HMGB1P33-201ENST00000563485 IGKV2-30P06310 120 aa4.09□□□□□ -1.75
HMGB1P33-201ENST00000563485 MYCLP12524 364 aaPredicted RBP4.09□□□□□ -1.75
HMGB1P33-201ENST00000563485 MMP13P45452 471 aa4.09□□□□□ -1.75
HMGB1P33-201ENST00000563485 SUMO3P55854 103 aaPredicted RBP4.09□□□□□ -1.75
HMGB1P33-201ENST00000563485 SUMO2P61956 95 aaKnown RBP4.09□□□□□ -1.75
HMGB1P33-201ENST00000563485 LRRC41Q15345 812 aa4.09□□□□□ -1.75
HMGB1P33-201ENST00000563485 FAM187BQ17R55 369 aa4.09□□□□□ -1.75
HMGB1P33-201ENST00000563485 Q4G0T1 1027 aa4.09□□□□□ -1.75
HMGB1P33-201ENST00000563485 CXorf57Q6NSI4 855 aaKnown RBP4.09□□□□□ -1.75
HMGB1P33-201ENST00000563485 SFTPA1Q8IWL2 248 aa4.09□□□□□ -1.75
HMGB1P33-201ENST00000563485 KIAA0319LQ8IZA0 1049 aa4.09□□□□□ -1.75
HMGB1P33-201ENST00000563485 SPSB4Q96A44 273 aa4.09□□□□□ -1.75
HMGB1P33-201ENST00000563485 ZBTB9Q96C00 473 aa4.09□□□□□ -1.75
HMGB1P33-201ENST00000563485 ZC3H10Q96K80 434 aaKnown RBP4.09□□□□□ -1.75
HMGB1P33-201ENST00000563485 WDR26Q9H7D7 661 aa4.09□□□□□ -1.75
HMGB1P33-201ENST00000563485 A1CFQ9NQ94 594 aaKnown RBP4.09□□□□□ -1.75
HMGB1P33-201ENST00000563485 XPNPEP3Q9NQH7 507 aa4.09□□□□□ -1.75
HMGB1P33-201ENST00000563485 SACM1LQ9NTJ5 587 aa4.09□□□□□ -1.75
HMGB1P33-201ENST00000563485 ELOVL5Q9NYP7 299 aa4.09□□□□□ -1.75
HMGB1P33-201ENST00000563485 DNMT3BQ9UBC3 853 aaKnown RBP4.09□□□□□ -1.75
HMGB1P33-201ENST00000563485 SCAF8Q9UPN6 1271 aaKnown RBP4.09□□□□□ -1.75
HMGB1P33-201ENST00000563485 CFAP69A5D8W1 941 aa4.08□□□□□ -1.76
HMGB1P33-201ENST00000563485 TRIM43BA6NCK2 446 aa4.08□□□□□ -1.76
HMGB1P33-201ENST00000563485 MBD3L4A6NDZ8 208 aaPredicted RBP4.08□□□□□ -1.76
HMGB1P33-201ENST00000563485 MBD3L3A6NE82 208 aaPredicted RBP4.08□□□□□ -1.76
HMGB1P33-201ENST00000563485 A6NNZ2 444 aa4.08□□□□□ -1.76
HMGB1P33-201ENST00000563485 KRTAP29-1A8MX34 341 aaPredicted RBP4.08□□□□□ -1.76
HMGB1P33-201ENST00000563485 E5RJQ4 531 aa4.08□□□□□ -1.76
HMGB1P33-201ENST00000563485 H7C4K7 107 aa4.08□□□□□ -1.76
HMGB1P33-201ENST00000563485 PYCARD-AS1I3L0S3 204 aa4.08□□□□□ -1.76
HMGB1P33-201ENST00000563485 PSMD9O00233 223 aa4.08□□□□□ -1.76
HMGB1P33-201ENST00000563485 RASAL1O95294 804 aa4.08□□□□□ -1.76
HMGB1P33-201ENST00000563485 SCGB1D2O95969 90 aa4.08□□□□□ -1.76
HMGB1P33-201ENST00000563485 BRAFP15056 766 aa4.08□□□□□ -1.76
HMGB1P33-201ENST00000563485 PRKAR1BP31321 381 aa4.08□□□□□ -1.76
HMGB1P33-201ENST00000563485 UQCRC1P31930 480 aa4.08□□□□□ -1.76
HMGB1P33-201ENST00000563485 ITGA8P53708 1063 aa4.08□□□□□ -1.76
HMGB1P33-201ENST00000563485 LMAN2Q12907 356 aa4.08□□□□□ -1.76
HMGB1P33-201ENST00000563485 RABEP1Q15276 862 aa4.08□□□□□ -1.76
HMGB1P33-201ENST00000563485 AWAT1Q58HT5 328 aa4.08□□□□□ -1.76
HMGB1P33-201ENST00000563485 TRIM43Q96BQ3 446 aaPredicted RBP4.08□□□□□ -1.76
HMGB1P33-201ENST00000563485 SUCLG2Q96I99 432 aa4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms