RNA–Protein interactions for RNA: ENST00000562668.1

SMG1-206, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 3

Gene SMG1, Length 449 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-206ENST00000562668 ATP6V0A2Q9Y487 856 aa5.59□□□□□ -1.51
SMG1-206ENST00000562668 LRRFIP2Q9Y608 721 aaKnown RBP5.59□□□□□ -1.51
SMG1-206ENST00000562668 PSME4Q14997 1843 aa5.58□□□□□ -1.52
SMG1-206ENST00000562668 ARAP2Q8WZ64 1704 aa5.58□□□□□ -1.52
SMG1-206ENST00000562668 TRGV11A0A075B6L2 103 aa5.58□□□□□ -1.52
SMG1-206ENST00000562668 PNMA6EA0A0J9YXQ4 647 aa5.58□□□□□ -1.52
SMG1-206ENST00000562668 TRIM75PA6NK02 468 aa5.58□□□□□ -1.52
SMG1-206ENST00000562668 NPHP1O15259 732 aa5.58□□□□□ -1.52
SMG1-206ENST00000562668 CLSTN1O94985 981 aa5.58□□□□□ -1.52
SMG1-206ENST00000562668 IGLV2-14P01704 120 aa5.58□□□□□ -1.52
SMG1-206ENST00000562668 WASP42768 502 aa5.58□□□□□ -1.52
SMG1-206ENST00000562668 CACNA2D1P54289 1103 aa5.58□□□□□ -1.52
SMG1-206ENST00000562668 CTXN1P60606 82 aa5.58□□□□□ -1.52
SMG1-206ENST00000562668 RPS8P62241 208 aaKnown RBP5.58□□□□□ -1.52
SMG1-206ENST00000562668 HNRNPA0Q13151 305 aaKnown RBP5.58□□□□□ -1.52
SMG1-206ENST00000562668 CCDC152Q4G0S7 254 aa5.58□□□□□ -1.52
SMG1-206ENST00000562668 RHOT1Q8IXI2 618 aa5.58□□□□□ -1.52
SMG1-206ENST00000562668 DCBLD1Q8N8Z6 715 aa5.58□□□□□ -1.52
SMG1-206ENST00000562668 NLGN4YQ8NFZ3 816 aaPredicted RBP5.58□□□□□ -1.52
SMG1-206ENST00000562668 ATL2Q8NHH9 583 aa5.58□□□□□ -1.52
SMG1-206ENST00000562668 KLHDC4Q8TBB5 520 aa5.58□□□□□ -1.52
SMG1-206ENST00000562668 DPF2Q92785 391 aa5.58□□□□□ -1.52
SMG1-206ENST00000562668 RTFDC1Q9BY42 306 aaPredicted RBP5.58□□□□□ -1.52
SMG1-206ENST00000562668 PUS3Q9BZE2 481 aaKnown RBP5.58□□□□□ -1.52
SMG1-206ENST00000562668 SEMA4GQ9NTN9 838 aa5.58□□□□□ -1.52
SMG1-206ENST00000562668 SCN9AQ15858 1988 aa5.57□□□□□ -1.52
SMG1-206ENST00000562668 GNAI3P08754 354 aa5.57□□□□□ -1.52
SMG1-206ENST00000562668 UBTFL1P0CB47 393 aaPredicted RBP5.57□□□□□ -1.52
SMG1-206ENST00000562668 POU3F3P20264 500 aaPredicted RBP5.57□□□□□ -1.52
SMG1-206ENST00000562668 GPSM2P81274 684 aa5.57□□□□□ -1.52
SMG1-206ENST00000562668 NHLH1Q02575 133 aa5.57□□□□□ -1.52
SMG1-206ENST00000562668 GPR162Q16538 588 aa5.57□□□□□ -1.52
SMG1-206ENST00000562668 LRCH2Q5VUJ6 765 aa5.57□□□□□ -1.52
SMG1-206ENST00000562668 MIGA2Q7L4E1 593 aa5.57□□□□□ -1.52
SMG1-206ENST00000562668 ATG9AQ7Z3C6 839 aa5.57□□□□□ -1.52
SMG1-206ENST00000562668 ITPRIPQ8IWB1 547 aa5.57□□□□□ -1.52
SMG1-206ENST00000562668 FTSJ3Q8IY81 847 aaKnown RBP5.57□□□□□ -1.52
SMG1-206ENST00000562668 VGLL2Q8N8G2 317 aa5.57□□□□□ -1.52
SMG1-206ENST00000562668 PSMD1Q99460 953 aa5.57□□□□□ -1.52
SMG1-206ENST00000562668 HEPHQ9BQS7 1158 aa5.57□□□□□ -1.52
SMG1-206ENST00000562668 FAM126AQ9BYI3 521 aaPredicted RBP5.57□□□□□ -1.52
SMG1-206ENST00000562668 POLLQ9UGP5 575 aa5.57□□□□□ -1.52
SMG1-206ENST00000562668 SAP30BPQ9UHR5 308 aaKnown RBP5.57□□□□□ -1.52
SMG1-206ENST00000562668 DDX19BQ9UMR2 479 aa5.57□□□□□ -1.52
SMG1-206ENST00000562668 RIPOR2Q9Y4F9 1068 aa5.57□□□□□ -1.52
SMG1-206ENST00000562668 A0A1W2PS29 197 aa5.56□□□□□ -1.52
SMG1-206ENST00000562668 ANKRD18BA2A2Z9 1011 aa5.56□□□□□ -1.52
SMG1-206ENST00000562668 PEX1O43933 1283 aa5.56□□□□□ -1.52
SMG1-206ENST00000562668 C1QL1O75973 258 aa5.56□□□□□ -1.52
SMG1-206ENST00000562668 GNAI2P04899 355 aa5.56□□□□□ -1.52
SMG1-206ENST00000562668 SLC6A4P31645 630 aa5.56□□□□□ -1.52
SMG1-206ENST00000562668 TARDBPQ13148 414 aaKnown RBP eCLIP5.56□□□□□ -1.52
SMG1-206ENST00000562668 IFIT5Q13325 482 aaKnown RBP5.56□□□□□ -1.52
SMG1-206ENST00000562668 LRRC24Q50LG9 513 aa5.56□□□□□ -1.52
SMG1-206ENST00000562668 CCDC93Q567U6 631 aa5.56□□□□□ -1.52
SMG1-206ENST00000562668 SP5Q6BEB4 398 aaPredicted RBP5.56□□□□□ -1.52
SMG1-206ENST00000562668 CEP85Q6P2H3 762 aa5.56□□□□□ -1.52
SMG1-206ENST00000562668 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP5.56□□□□□ -1.52
SMG1-206ENST00000562668 ANKRD18AQ8IVF6 992 aa5.56□□□□□ -1.52
SMG1-206ENST00000562668 Q8NA96 180 aa5.56□□□□□ -1.52
SMG1-206ENST00000562668 TBC1D16Q8TBP0 767 aa5.56□□□□□ -1.52
SMG1-206ENST00000562668 RAB24Q969Q5 203 aa5.56□□□□□ -1.52
SMG1-206ENST00000562668 TMX3Q96JJ7 454 aa5.56□□□□□ -1.52
SMG1-206ENST00000562668 TMX1Q9H3N1 280 aa5.56□□□□□ -1.52
SMG1-206ENST00000562668 SLC17A6Q9P2U8 582 aa5.56□□□□□ -1.52
SMG1-206ENST00000562668 MCM8Q9UJA3 840 aa5.56□□□□□ -1.52
SMG1-206ENST00000562668 INTUQ9ULD6 942 aa5.56□□□□□ -1.52
SMG1-206ENST00000562668 FRMD4BQ9Y2L6 1034 aa5.56□□□□□ -1.52
SMG1-206ENST00000562668 WDR90Q96KV7 1748 aa5.55□□□□□ -1.52
SMG1-206ENST00000562668 SNAP23O00161 211 aa5.55□□□□□ -1.52
SMG1-206ENST00000562668 EYA2O00167 538 aa5.55□□□□□ -1.52
SMG1-206ENST00000562668 CIAO1O76071 339 aa5.55□□□□□ -1.52
SMG1-206ENST00000562668 MATN4O95460 622 aa5.55□□□□□ -1.52
SMG1-206ENST00000562668 FGFR2P21802 821 aa5.55□□□□□ -1.52
SMG1-206ENST00000562668 KLRK1P26718 216 aa5.55□□□□□ -1.52
SMG1-206ENST00000562668 CDC42EP1Q00587 391 aa5.55□□□□□ -1.52
SMG1-206ENST00000562668 CHRNDQ07001 517 aa5.55□□□□□ -1.52
SMG1-206ENST00000562668 CLUL1Q15846 466 aa5.55□□□□□ -1.52
SMG1-206ENST00000562668 CCDC57Q2TAC2 916 aa5.55□□□□□ -1.52
SMG1-206ENST00000562668 CNTD1Q8N815 330 aa5.55□□□□□ -1.52
SMG1-206ENST00000562668 PPM1NQ8N819 430 aa5.55□□□□□ -1.52
SMG1-206ENST00000562668 GOLGA6L2Q8N9W4 650 aaPredicted RBP5.55□□□□□ -1.52
SMG1-206ENST00000562668 TMEM125Q96AQ2 219 aa5.55□□□□□ -1.52
SMG1-206ENST00000562668 TLR10Q9BXR5 811 aa5.55□□□□□ -1.52
SMG1-206ENST00000562668 TAOK3Q9H2K8 898 aa5.55□□□□□ -1.52
SMG1-206ENST00000562668 KLK15Q9H2R5 256 aa5.55□□□□□ -1.52
SMG1-206ENST00000562668 TDP1Q9NUW8 608 aa5.55□□□□□ -1.52
SMG1-206ENST00000562668 TUBD1Q9UJT1 453 aa5.55□□□□□ -1.52
SMG1-206ENST00000562668 PA2G4Q9UQ80 394 aaKnown RBP5.55□□□□□ -1.52
SMG1-206ENST00000562668 CDYLQ9Y232 598 aa5.55□□□□□ -1.52
SMG1-206ENST00000562668 NOP58Q9Y2X3 529 aaKnown RBP5.55□□□□□ -1.52
SMG1-206ENST00000562668 MED23Q9ULK4 1368 aa5.55□□□□□ -1.52
SMG1-206ENST00000562668 YDJCA8MPS7 323 aa5.54□□□□□ -1.52
SMG1-206ENST00000562668 FZD9O00144 591 aa5.54□□□□□ -1.52
SMG1-206ENST00000562668 GRM6O15303 877 aa5.54□□□□□ -1.52
SMG1-206ENST00000562668 TAF5LO75529 589 aa5.54□□□□□ -1.52
SMG1-206ENST00000562668 MTHFD1P11586 935 aaKnown RBP5.54□□□□□ -1.52
SMG1-206ENST00000562668 CDK4P11802 303 aa5.54□□□□□ -1.52
SMG1-206ENST00000562668 IGHMBP2P38935 993 aaKnown RBP5.54□□□□□ -1.52
SMG1-206ENST00000562668 IARSP41252 1262 aaKnown RBP5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms