RNA–Protein interactions for RNA: ENST00000562118.1

CDH1-204, Transcript of cadherin 1, humanhuman

TSL 2

Gene CDH1, Length 952 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-204ENST00000562118 KIF11P52732 1056 aa14.19□□□□□ -0.14
CDH1-204ENST00000562118 MAP3K7CLP57077 242 aa14.19□□□□□ -0.14
CDH1-204ENST00000562118 TPM4P67936 248 aa14.19□□□□□ -0.14
CDH1-204ENST00000562118 BHLHA9Q7RTU4 235 aa14.19□□□□□ -0.14
CDH1-204ENST00000562118 GPRIN1Q7Z2K8 1008 aa14.19□□□□□ -0.14
CDH1-204ENST00000562118 GJD3Q8N144 294 aa14.19□□□□□ -0.14
CDH1-204ENST00000562118 ZNF276Q8N554 614 aa14.19□□□□□ -0.14
CDH1-204ENST00000562118 ZNF606Q8WXB4 792 aa14.19□□□□□ -0.14
CDH1-204ENST00000562118 DDX1Q92499 740 aaKnown RBP14.19□□□□□ -0.14
CDH1-204ENST00000562118 ACSF2Q96CM8 615 aaPredicted RBP14.19□□□□□ -0.14
CDH1-204ENST00000562118 ASB16Q96NS5 453 aa14.19□□□□□ -0.14
CDH1-204ENST00000562118 NECAB3Q96P71 396 aaPredicted RBP14.19□□□□□ -0.14
CDH1-204ENST00000562118 MED10Q9BTT4 135 aa14.19□□□□□ -0.14
CDH1-204ENST00000562118 SCML2Q9UQR0 700 aa14.19□□□□□ -0.14
CDH1-204ENST00000562118 ZNF840PA6NDX5 716 aa14.18□□□□□ -0.14
CDH1-204ENST00000562118 GOLGA6L19H0YKK7 550 aa14.18□□□□□ -0.14
CDH1-204ENST00000562118 PES1O00541 588 aaKnown RBP14.18□□□□□ -0.14
CDH1-204ENST00000562118 GABBR2O75899 941 aa14.18□□□□□ -0.14
CDH1-204ENST00000562118 TCF3P15923 654 aa14.18□□□□□ -0.14
CDH1-204ENST00000562118 BRD2P25440 801 aaKnown RBP14.18□□□□□ -0.14
CDH1-204ENST00000562118 GNA15P30679 374 aa14.18□□□□□ -0.14
CDH1-204ENST00000562118 CDH5P33151 784 aaPredicted RBP14.18□□□□□ -0.14
CDH1-204ENST00000562118 GPD2P43304 727 aa14.18□□□□□ -0.14
CDH1-204ENST00000562118 TUBP50607 506 aa14.18□□□□□ -0.14
CDH1-204ENST00000562118 PDE4CQ08493 712 aa14.18□□□□□ -0.14
CDH1-204ENST00000562118 TEAD2Q15562 447 aa14.18□□□□□ -0.14
CDH1-204ENST00000562118 ARHGAP44Q17R89 818 aa14.18□□□□□ -0.14
CDH1-204ENST00000562118 GOLGA7BQ2TAP0 167 aa14.18□□□□□ -0.14
CDH1-204ENST00000562118 FILIP1LQ4L180 1135 aa14.18□□□□□ -0.14
CDH1-204ENST00000562118 PM20D1Q6GTS8 502 aa14.18□□□□□ -0.14
CDH1-204ENST00000562118 SARM1Q6SZW1 724 aa14.18□□□□□ -0.14
CDH1-204ENST00000562118 CCDC186Q7Z3E2 898 aa14.18□□□□□ -0.14
CDH1-204ENST00000562118 PIGZQ86VD9 579 aa14.18□□□□□ -0.14
CDH1-204ENST00000562118 SCAMP5Q8TAC9 235 aa14.18□□□□□ -0.14
CDH1-204ENST00000562118 STK32AQ8WU08 396 aa14.18□□□□□ -0.14
CDH1-204ENST00000562118 BAP1Q92560 729 aa14.18□□□□□ -0.14
CDH1-204ENST00000562118 RPGRIP1Q96KN7 1286 aa14.18□□□□□ -0.14
CDH1-204ENST00000562118 ZSWIM3Q96MP5 696 aa14.18□□□□□ -0.14
CDH1-204ENST00000562118 EDEM3Q9BZQ6 932 aa14.18□□□□□ -0.14
CDH1-204ENST00000562118 LHX5Q9H2C1 402 aa14.18□□□□□ -0.14
CDH1-204ENST00000562118 FBXO44Q9H4M3 255 aa14.18□□□□□ -0.14
CDH1-204ENST00000562118 TASP1Q9H6P5 420 aa14.18□□□□□ -0.14
CDH1-204ENST00000562118 ACP6Q9NPH0 428 aa14.18□□□□□ -0.14
CDH1-204ENST00000562118 CYLDQ9NQC7 956 aa14.18□□□□□ -0.14
CDH1-204ENST00000562118 FAM207AQ9NSI2 230 aaPredicted RBP14.18□□□□□ -0.14
CDH1-204ENST00000562118 OBP2AQ9NY56 170 aa14.18□□□□□ -0.14
CDH1-204ENST00000562118 IGSF9Q9P2J2 1179 aa14.18□□□□□ -0.14
CDH1-204ENST00000562118 ITIH6Q6UXX5 1313 aa14.17□□□□□ -0.14
CDH1-204ENST00000562118 COL4A3Q01955 1670 aa14.17□□□□□ -0.14
CDH1-204ENST00000562118 TULP2O00295 520 aa14.17□□□□□ -0.14
CDH1-204ENST00000562118 CYP26A1O43174 497 aa14.17□□□□□ -0.14
CDH1-204ENST00000562118 ECI2O75521 394 aa14.17□□□□□ -0.14
CDH1-204ENST00000562118 OAS1P00973 400 aaKnown RBP14.17□□□□□ -0.14
CDH1-204ENST00000562118 CALCAP01258 141 aa14.17□□□□□ -0.14
CDH1-204ENST00000562118 PNMA6AP0CW24 399 aaPredicted RBP14.17□□□□□ -0.14
CDH1-204ENST00000562118 MYL4P12829 197 aa14.17□□□□□ -0.14
CDH1-204ENST00000562118 KRT5P13647 590 aa14.17□□□□□ -0.14
CDH1-204ENST00000562118 CD19P15391 556 aa14.17□□□□□ -0.14
CDH1-204ENST00000562118 YWHAQP27348 245 aa14.17□□□□□ -0.14
CDH1-204ENST00000562118 BPIFB4P59827 614 aa14.17□□□□□ -0.14
CDH1-204ENST00000562118 POLR2FP61218 127 aaKnown RBP14.17□□□□□ -0.14
CDH1-204ENST00000562118 ZNF268Q14587 947 aaPredicted RBP14.17□□□□□ -0.14
CDH1-204ENST00000562118 STXBP5Q5T5C0 1151 aa14.17□□□□□ -0.14
CDH1-204ENST00000562118 SLC47A2Q86VL8 602 aa14.17□□□□□ -0.14
CDH1-204ENST00000562118 MON1AQ86VX9 555 aa14.17□□□□□ -0.14
CDH1-204ENST00000562118 KIAA1958Q8N8K9 716 aa14.17□□□□□ -0.14
CDH1-204ENST00000562118 PDZD8Q8NEN9 1154 aa14.17□□□□□ -0.14
CDH1-204ENST00000562118 OLIG1Q8TAK6 271 aa14.17□□□□□ -0.14
CDH1-204ENST00000562118 EPS8L1Q8TE68 723 aa14.17□□□□□ -0.14
CDH1-204ENST00000562118 HSFY1Q96LI6 401 aa14.17□□□□□ -0.14
CDH1-204ENST00000562118 COL25A1Q9BXS0 654 aaPredicted RBP14.17□□□□□ -0.14
CDH1-204ENST00000562118 NOCTQ9UK39 431 aaKnown RBP14.17□□□□□ -0.14
CDH1-204ENST00000562118 A0A1W2PQJ5 194 aa14.16□□□□□ -0.14
CDH1-204ENST00000562118 MED7O43513 233 aa14.16□□□□□ -0.14
CDH1-204ENST00000562118 SERPINC1P01008 464 aa14.16□□□□□ -0.14
CDH1-204ENST00000562118 CFHP08603 1231 aa14.16□□□□□ -0.14
CDH1-204ENST00000562118 CYP11B1P15538 503 aa14.16□□□□□ -0.14
CDH1-204ENST00000562118 GJA1P17302 382 aa14.16□□□□□ -0.14
CDH1-204ENST00000562118 SOX5P35711 763 aa14.16□□□□□ -0.14
CDH1-204ENST00000562118 PGFP49763 221 aa14.16□□□□□ -0.14
CDH1-204ENST00000562118 UBASH3AP57075 661 aa14.16□□□□□ -0.14
CDH1-204ENST00000562118 PTK2Q05397 1052 aa14.16□□□□□ -0.14
CDH1-204ENST00000562118 TAF10Q12962 218 aa14.16□□□□□ -0.14
CDH1-204ENST00000562118 RAPGEF1Q13905 1077 aa14.16□□□□□ -0.14
CDH1-204ENST00000562118 FAM78AQ5JUQ0 283 aa14.16□□□□□ -0.14
CDH1-204ENST00000562118 PMF1Q6P1K2 205 aa14.16□□□□□ -0.14
CDH1-204ENST00000562118 MTSS1LQ765P7 747 aa14.16□□□□□ -0.14
CDH1-204ENST00000562118 GAS2L3Q86XJ1 694 aa14.16□□□□□ -0.14
CDH1-204ENST00000562118 ZNF677Q86XU0 584 aa14.16□□□□□ -0.14
CDH1-204ENST00000562118 RNF135Q8IUD6 432 aa14.16□□□□□ -0.14
CDH1-204ENST00000562118 WDTC1Q8N5D0 677 aa14.16□□□□□ -0.14
CDH1-204ENST00000562118 NEK11Q8NG66 645 aa14.16□□□□□ -0.14
CDH1-204ENST00000562118 ING5Q8WYH8 240 aa14.16□□□□□ -0.14
CDH1-204ENST00000562118 FGF14Q92915 247 aa14.16□□□□□ -0.14
CDH1-204ENST00000562118 SMARCD2Q92925 531 aa14.16□□□□□ -0.14
CDH1-204ENST00000562118 ELSPBP1Q96BH3 223 aa14.16□□□□□ -0.14
CDH1-204ENST00000562118 SLITRK1Q96PX8 696 aa14.16□□□□□ -0.14
CDH1-204ENST00000562118 SYT11Q9BT88 431 aa14.16□□□□□ -0.14
CDH1-204ENST00000562118 SLC4A5Q9BY07 1137 aa14.16□□□□□ -0.14
CDH1-204ENST00000562118 SLC46A2Q9BY10 475 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms