RNA–Protein interactions for RNA: ENST00000561623.5

GTF3C1-202, Transcript of general transcription factor IIIC subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GTF3C1, Length 7,015 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-202ENST00000561623 OMA1Q96E52 524 aa10.56□□□□□ -0.72
GTF3C1-202ENST00000561623 POP1Q99575 1024 aaKnown RBP10.56□□□□□ -0.72
GTF3C1-202ENST00000561623 ZNF184Q99676 751 aaPredicted RBP10.56□□□□□ -0.72
GTF3C1-202ENST00000561623 APOL5Q9BWW9 433 aa10.56□□□□□ -0.72
GTF3C1-202ENST00000561623 TRPC7Q9HCX4 862 aa10.56□□□□□ -0.72
GTF3C1-202ENST00000561623 FAM50BQ9Y247 325 aa10.56□□□□□ -0.72
GTF3C1-202ENST00000561623 PSMD3O43242 534 aa10.56□□□□□ -0.72
GTF3C1-202ENST00000561623 RARBP10826 455 aa10.56□□□□□ -0.72
GTF3C1-202ENST00000561623 RRM1P23921 792 aa10.56□□□□□ -0.72
GTF3C1-202ENST00000561623 SPP2Q13103 211 aa10.56□□□□□ -0.72
GTF3C1-202ENST00000561623 DCAF6Q58WW2 860 aa10.56□□□□□ -0.72
GTF3C1-202ENST00000561623 TFDP3Q5H9I0 405 aa10.56□□□□□ -0.72
GTF3C1-202ENST00000561623 DENND1BQ6P3S1 775 aa10.56□□□□□ -0.72
GTF3C1-202ENST00000561623 ZSCAN18Q8TBC5 510 aaPredicted RBP10.56□□□□□ -0.72
GTF3C1-202ENST00000561623 TIPINQ9BVW5 301 aa10.56□□□□□ -0.72
GTF3C1-202ENST00000561623 SEMA6AQ9H2E6 1030 aa10.56□□□□□ -0.72
GTF3C1-202ENST00000561623 KBTBD4Q9NVX7 518 aa10.56□□□□□ -0.72
GTF3C1-202ENST00000561623 NINJ2Q9NZG7 142 aa10.56□□□□□ -0.72
GTF3C1-202ENST00000561623 BCL10O95999 233 aa10.56□□□□□ -0.72
GTF3C1-202ENST00000561623 HMBSP08397 361 aa10.56□□□□□ -0.72
GTF3C1-202ENST00000561623 EMC2Q15006 297 aa10.56□□□□□ -0.72
GTF3C1-202ENST00000561623 KBTBD12Q3ZCT8 623 aa10.56□□□□□ -0.72
GTF3C1-202ENST00000561623 SNX31Q8N9S9 440 aa10.56□□□□□ -0.72
GTF3C1-202ENST00000561623 ELMO3Q96BJ8 720 aa10.56□□□□□ -0.72
GTF3C1-202ENST00000561623 PARK7Q99497 189 aaKnown RBP10.56□□□□□ -0.72
GTF3C1-202ENST00000561623 UTP6Q9NYH9 597 aaKnown RBP10.56□□□□□ -0.72
GTF3C1-202ENST00000561623 STMN3Q9NZ72 180 aa10.56□□□□□ -0.72
GTF3C1-202ENST00000561623 KCND2Q9NZV8 630 aa10.56□□□□□ -0.72
GTF3C1-202ENST00000561623 COPG1Q9Y678 874 aaKnown RBP10.56□□□□□ -0.72
GTF3C1-202ENST00000561623 ZCCHC11Q5TAX3 1644 aaKnown RBP10.55□□□□□ -0.72
GTF3C1-202ENST00000561623 NCF1BA6NI72 391 aaPredicted RBP10.55□□□□□ -0.72
GTF3C1-202ENST00000561623 NCF1CA8MVU1 366 aaPredicted RBP10.55□□□□□ -0.72
GTF3C1-202ENST00000561623 NCF1P14598 390 aaPredicted RBP10.55□□□□□ -0.72
GTF3C1-202ENST00000561623 ITGB3BPQ13352 177 aaPredicted RBP10.55□□□□□ -0.72
GTF3C1-202ENST00000561623 EFHBQ8N7U6 833 aa10.55□□□□□ -0.72
GTF3C1-202ENST00000561623 RMND5BQ96G75 393 aaPredicted RBP10.55□□□□□ -0.72
GTF3C1-202ENST00000561623 TRIM45Q9H8W5 580 aaPredicted RBP10.55□□□□□ -0.72
GTF3C1-202ENST00000561623 LATS2Q9NRM7 1088 aa10.55□□□□□ -0.72
GTF3C1-202ENST00000561623 IARS2Q9NSE4 1012 aaKnown RBP10.55□□□□□ -0.72
GTF3C1-202ENST00000561623 ADCY10Q96PN6 1610 aa10.55□□□□□ -0.72
GTF3C1-202ENST00000561623 A0A0A6YYK5 440 aaPredicted RBP10.55□□□□□ -0.72
GTF3C1-202ENST00000561623 EXTL3O43909 919 aa10.55□□□□□ -0.72
GTF3C1-202ENST00000561623 PPP3CCP48454 512 aa10.55□□□□□ -0.72
GTF3C1-202ENST00000561623 RAB14P61106 215 aa10.55□□□□□ -0.72
GTF3C1-202ENST00000561623 TMEM132DQ14C87 1099 aa10.55□□□□□ -0.72
GTF3C1-202ENST00000561623 MICALL2Q8IY33 904 aa10.55□□□□□ -0.72
GTF3C1-202ENST00000561623 HS6ST3Q8IZP7 471 aa10.55□□□□□ -0.72
GTF3C1-202ENST00000561623 TNIP3Q96KP6 325 aa10.55□□□□□ -0.72
GTF3C1-202ENST00000561623 FAM95CA0A1B0GW59 222 aa10.55□□□□□ -0.72
GTF3C1-202ENST00000561623 NDUFB10O96000 172 aa10.55□□□□□ -0.72
GTF3C1-202ENST00000561623 IMPDH2P12268 514 aa10.55□□□□□ -0.72
GTF3C1-202ENST00000561623 ETFBP38117 255 aa10.55□□□□□ -0.72
GTF3C1-202ENST00000561623 STAT5BP51692 787 aa10.55□□□□□ -0.72
GTF3C1-202ENST00000561623 C21orf59P57076 290 aa10.55□□□□□ -0.72
GTF3C1-202ENST00000561623 CUL2Q13617 745 aa10.55□□□□□ -0.72
GTF3C1-202ENST00000561623 TBCELQ5QJ74 424 aa10.55□□□□□ -0.72
GTF3C1-202ENST00000561623 SLC26A11Q86WA9 606 aa10.55□□□□□ -0.72
GTF3C1-202ENST00000561623 CBWD2Q8IUF1 395 aa10.55□□□□□ -0.72
GTF3C1-202ENST00000561623 FAM136AQ96C01 138 aa10.55□□□□□ -0.72
GTF3C1-202ENST00000561623 OTUB1Q96FW1 271 aaPredicted RBP10.55□□□□□ -0.72
GTF3C1-202ENST00000561623 YME1L1Q96TA2 773 aa10.55□□□□□ -0.72
GTF3C1-202ENST00000561623 RBBP8Q99708 897 aa10.55□□□□□ -0.72
GTF3C1-202ENST00000561623 RIC8BQ9NVN3 520 aa10.55□□□□□ -0.72
GTF3C1-202ENST00000561623 SLC24A2Q9UI40 661 aa10.55□□□□□ -0.72
GTF3C1-202ENST00000561623 KIAA0391O15091 583 aaKnown RBP10.55□□□□□ -0.72
GTF3C1-202ENST00000561623 CLASP2O75122 1294 aaKnown RBP10.55□□□□□ -0.72
GTF3C1-202ENST00000561623 MMRN1Q13201 1228 aa10.55□□□□□ -0.72
GTF3C1-202ENST00000561623 NFYCQ13952 458 aa10.55□□□□□ -0.72
GTF3C1-202ENST00000561623 PKN3Q6P5Z2 889 aa10.55□□□□□ -0.72
GTF3C1-202ENST00000561623 SPOCD1Q6ZMY3 1216 aa10.55□□□□□ -0.72
GTF3C1-202ENST00000561623 TERB1Q8NA31 727 aa10.55□□□□□ -0.72
GTF3C1-202ENST00000561623 ZNF75CPQ92670 426 aaPredicted RBP10.55□□□□□ -0.72
GTF3C1-202ENST00000561623 RNF208Q9H0X6 261 aa10.55□□□□□ -0.72
GTF3C1-202ENST00000561623 AGRPO00253 132 aa10.55□□□□□ -0.72
GTF3C1-202ENST00000561623 HSMCR30P0CW71 290 aa10.55□□□□□ -0.72
GTF3C1-202ENST00000561623 GRK2P25098 689 aa10.55□□□□□ -0.72
GTF3C1-202ENST00000561623 RBP5P82980 135 aa10.55□□□□□ -0.72
GTF3C1-202ENST00000561623 ACAP1Q15027 740 aa10.55□□□□□ -0.72
GTF3C1-202ENST00000561623 OTOAQ7RTW8 1153 aa10.55□□□□□ -0.72
GTF3C1-202ENST00000561623 APPL2Q8NEU8 664 aa10.55□□□□□ -0.72
GTF3C1-202ENST00000561623 OR6Y1Q8NGX8 325 aa10.55□□□□□ -0.72
GTF3C1-202ENST00000561623 ABHD8Q96I13 439 aa10.55□□□□□ -0.72
GTF3C1-202ENST00000561623 RNPEPL1Q9HAU8 725 aa10.55□□□□□ -0.72
GTF3C1-202ENST00000561623 CHST12Q9NRB3 414 aa10.55□□□□□ -0.72
GTF3C1-202ENST00000561623 HOXC10Q9NYD6 342 aa10.55□□□□□ -0.72
GTF3C1-202ENST00000561623 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.55□□□□□ -0.72
GTF3C1-202ENST00000561623 A0A087X0B3 334 aa10.54□□□□□ -0.72
GTF3C1-202ENST00000561623 PEX1O43933 1283 aa10.54□□□□□ -0.72
GTF3C1-202ENST00000561623 RASSF9O75901 435 aa10.54□□□□□ -0.72
GTF3C1-202ENST00000561623 ARIH2O95376 493 aa10.54□□□□□ -0.72
GTF3C1-202ENST00000561623 TNFAIP8O95379 198 aa10.54□□□□□ -0.72
GTF3C1-202ENST00000561623 GRIK1P39086 918 aa10.54□□□□□ -0.72
GTF3C1-202ENST00000561623 PTDSS1P48651 473 aaKnown RBP10.54□□□□□ -0.72
GTF3C1-202ENST00000561623 SLC1A6P48664 564 aa10.54□□□□□ -0.72
GTF3C1-202ENST00000561623 TROAPQ12815 778 aa10.54□□□□□ -0.72
GTF3C1-202ENST00000561623 COG2Q14746 738 aa10.54□□□□□ -0.72
GTF3C1-202ENST00000561623 FAM83EQ2M2I3 478 aa10.54□□□□□ -0.72
GTF3C1-202ENST00000561623 RSBN1Q5VWQ0 802 aaPredicted RBP10.54□□□□□ -0.72
GTF3C1-202ENST00000561623 ARHGAP17Q68EM7 881 aa10.54□□□□□ -0.72
GTF3C1-202ENST00000561623 ZCCHC23Q6ZST2 131 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms