RNA–Protein interactions for RNA: ENST00000561436.1

HERC1-215, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 4

Gene HERC1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-215ENST00000561436 HAS1Q92839 578 aa4.44□□□□□ -1.7
HERC1-215ENST00000561436 KLHL32Q96NJ5 620 aa4.44□□□□□ -1.7
HERC1-215ENST00000561436 MED15Q96RN5 788 aa4.44□□□□□ -1.7
HERC1-215ENST00000561436 TTPALQ9BTX7 342 aa4.44□□□□□ -1.7
HERC1-215ENST00000561436 AKIP1Q9NQ31 210 aa4.44□□□□□ -1.7
HERC1-215ENST00000561436 ITGB1BP2Q9UKP3 347 aa4.44□□□□□ -1.7
HERC1-215ENST00000561436 HDAC9Q9UKV0 1011 aa4.44□□□□□ -1.7
HERC1-215ENST00000561436 NEXMIFQ5QGS0 1516 aa4.44□□□□□ -1.7
HERC1-215ENST00000561436 ADGRF5Q8IZF2 1346 aa4.44□□□□□ -1.7
HERC1-215ENST00000561436 LRP5O75197 1615 aa4.43□□□□□ -1.7
HERC1-215ENST00000561436 IQGAP3Q86VI3 1631 aa4.43□□□□□ -1.7
HERC1-215ENST00000561436 LOC102724159A0A0B4J2E5 919 aa4.43□□□□□ -1.7
HERC1-215ENST00000561436 PYCARD-AS1I3L0S3 204 aa4.43□□□□□ -1.7
HERC1-215ENST00000561436 ERN1O75460 977 aaKnown RBP4.43□□□□□ -1.7
HERC1-215ENST00000561436 TCEA3O75764 348 aa4.43□□□□□ -1.7
HERC1-215ENST00000561436 RASSF9O75901 435 aa4.43□□□□□ -1.7
HERC1-215ENST00000561436 FOSP01100 380 aaPredicted RBP4.43□□□□□ -1.7
HERC1-215ENST00000561436 HLA-DOAP06340 250 aa4.43□□□□□ -1.7
HERC1-215ENST00000561436 ELANEP08246 267 aa4.43□□□□□ -1.7
HERC1-215ENST00000561436 ATXN1LP0C7T5 689 aaKnown RBP4.43□□□□□ -1.7
HERC1-215ENST00000561436 TSHRP16473 764 aa4.43□□□□□ -1.7
HERC1-215ENST00000561436 SERPINB3P29508 390 aa4.43□□□□□ -1.7
HERC1-215ENST00000561436 VIPR2P41587 438 aa4.43□□□□□ -1.7
HERC1-215ENST00000561436 SLC11A2P49281 568 aa4.43□□□□□ -1.7
HERC1-215ENST00000561436 CARSP49589 748 aaKnown RBP4.43□□□□□ -1.7
HERC1-215ENST00000561436 UCP3P55916 312 aa4.43□□□□□ -1.7
HERC1-215ENST00000561436 WNT3P56703 355 aa4.43□□□□□ -1.7
HERC1-215ENST00000561436 TP53BP2Q13625 1128 aa4.43□□□□□ -1.7
HERC1-215ENST00000561436 STARD3Q14849 445 aa4.43□□□□□ -1.7
HERC1-215ENST00000561436 KRT72Q14CN4 511 aa4.43□□□□□ -1.7
HERC1-215ENST00000561436 PWP2Q15269 919 aaKnown RBP4.43□□□□□ -1.7
HERC1-215ENST00000561436 SPDYE7PQ495Y7 208 aa4.43□□□□□ -1.7
HERC1-215ENST00000561436 TIGD2Q4W5G0 525 aa4.43□□□□□ -1.7
HERC1-215ENST00000561436 CRB2Q5IJ48 1285 aa4.43□□□□□ -1.7
HERC1-215ENST00000561436 C3orf38Q5JPI3 329 aa4.43□□□□□ -1.7
HERC1-215ENST00000561436 KCNV1Q6PIU1 500 aa4.43□□□□□ -1.7
HERC1-215ENST00000561436 TSHZ1Q6ZSZ6 1077 aa4.43□□□□□ -1.7
HERC1-215ENST00000561436 RHOUQ7L0Q8 258 aa4.43□□□□□ -1.7
HERC1-215ENST00000561436 TCP11L2Q8N4U5 519 aa4.43□□□□□ -1.7
HERC1-215ENST00000561436 PDPRQ8NCN5 879 aa4.43□□□□□ -1.7
HERC1-215ENST00000561436 CCDC150Q8NCX0 1101 aa4.43□□□□□ -1.7
HERC1-215ENST00000561436 CPEB3Q8NE35 698 aaKnown RBP4.43□□□□□ -1.7
HERC1-215ENST00000561436 FAM46DQ8NEK8 389 aa4.43□□□□□ -1.7
HERC1-215ENST00000561436 TMIEQ8NEW7 156 aa4.43□□□□□ -1.7
HERC1-215ENST00000561436 OR56A1Q8NGH5 318 aa4.43□□□□□ -1.7
HERC1-215ENST00000561436 SPSB4Q96A44 273 aa4.43□□□□□ -1.7
HERC1-215ENST00000561436 CHFRQ96EP1 664 aa4.43□□□□□ -1.7
HERC1-215ENST00000561436 LTV1Q96GA3 475 aaPredicted RBP4.43□□□□□ -1.7
HERC1-215ENST00000561436 SNX22Q96L94 193 aa4.43□□□□□ -1.7
HERC1-215ENST00000561436 PPP1R9BQ96SB3 815 aa4.43□□□□□ -1.7
HERC1-215ENST00000561436 ADAM2Q99965 735 aa4.43□□□□□ -1.7
HERC1-215ENST00000561436 SPATA5L1Q9BVQ7 753 aa4.43□□□□□ -1.7
HERC1-215ENST00000561436 STK31Q9BXU1 1019 aa4.43□□□□□ -1.7
HERC1-215ENST00000561436 MS4A7Q9GZW8 240 aaPredicted RBP4.43□□□□□ -1.7
HERC1-215ENST00000561436 TRMT13Q9NUP7 481 aaKnown RBP4.43□□□□□ -1.7
HERC1-215ENST00000561436 STK32BQ9NY57 414 aa4.43□□□□□ -1.7
HERC1-215ENST00000561436 STK26Q9P289 416 aa4.43□□□□□ -1.7
HERC1-215ENST00000561436 ZNF212Q9UDV6 495 aa4.43□□□□□ -1.7
HERC1-215ENST00000561436 SLC45A2Q9UMX9 530 aa4.43□□□□□ -1.7
HERC1-215ENST00000561436 MAGED2Q9UNF1 606 aaPredicted RBP4.43□□□□□ -1.7
HERC1-215ENST00000561436 SHOC2Q9UQ13 582 aa4.43□□□□□ -1.7
HERC1-215ENST00000561436 MTO1Q9Y2Z2 717 aaKnown RBP4.43□□□□□ -1.7
HERC1-215ENST00000561436 BCL9O00512 1426 aa4.43□□□□□ -1.7
HERC1-215ENST00000561436 YTHDC2Q9H6S0 1430 aaKnown RBP4.43□□□□□ -1.7
HERC1-215ENST00000561436 CPDO75976 1380 aa4.42□□□□□ -1.7
HERC1-215ENST00000561436 A0A087WWL8 130 aa4.42□□□□□ -1.7
HERC1-215ENST00000561436 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa4.42□□□□□ -1.7
HERC1-215ENST00000561436 CCDC195A0A1B0GUA6 201 aa4.42□□□□□ -1.7
HERC1-215ENST00000561436 PRSS29PA6NIE9 313 aa4.42□□□□□ -1.7
HERC1-215ENST00000561436 TOR1BO14657 336 aa4.42□□□□□ -1.7
HERC1-215ENST00000561436 PIK3C2GO75747 1445 aa4.42□□□□□ -1.7
HERC1-215ENST00000561436 DNAJB5O75953 348 aa4.42□□□□□ -1.7
HERC1-215ENST00000561436 KIF20AO95235 890 aa4.42□□□□□ -1.7
HERC1-215ENST00000561436 MT-ND5P03915 603 aa4.42□□□□□ -1.7
HERC1-215ENST00000561436 FCER1AP12319 257 aa4.42□□□□□ -1.7
HERC1-215ENST00000561436 ITGALP20701 1170 aa4.42□□□□□ -1.7
HERC1-215ENST00000561436 CTBP1Q13363 440 aa4.42□□□□□ -1.7
HERC1-215ENST00000561436 IQCB1Q15051 598 aa4.42□□□□□ -1.7
HERC1-215ENST00000561436 EZH2Q15910 746 aaKnown RBP4.42□□□□□ -1.7
HERC1-215ENST00000561436 INSCQ1MX18 579 aa4.42□□□□□ -1.7
HERC1-215ENST00000561436 ARL13BQ3SXY8 428 aa4.42□□□□□ -1.7
HERC1-215ENST00000561436 PREPLQ4J6C6 727 aaPredicted RBP4.42□□□□□ -1.7
HERC1-215ENST00000561436 PRR16Q569H4 304 aa4.42□□□□□ -1.7
HERC1-215ENST00000561436 AGAP9Q5VTM2 703 aa4.42□□□□□ -1.7
HERC1-215ENST00000561436 TAPT1Q6NXT6 567 aa4.42□□□□□ -1.7
HERC1-215ENST00000561436 PGBD2Q6P3X8 592 aa4.42□□□□□ -1.7
HERC1-215ENST00000561436 LRRC55Q6ZSA7 311 aa4.42□□□□□ -1.7
HERC1-215ENST00000561436 SPATA31E1Q6ZUB1 1445 aa4.42□□□□□ -1.7
HERC1-215ENST00000561436 SYTL1Q8IYJ3 562 aa4.42□□□□□ -1.7
HERC1-215ENST00000561436 SYNE4Q8N205 404 aa4.42□□□□□ -1.7
HERC1-215ENST00000561436 TXLNBQ8N3L3 684 aa4.42□□□□□ -1.7
HERC1-215ENST00000561436 GPR150Q8NGU9 434 aa4.42□□□□□ -1.7
HERC1-215ENST00000561436 TRIM63Q969Q1 353 aa4.42□□□□□ -1.7
HERC1-215ENST00000561436 ZNF566Q969W8 418 aa4.42□□□□□ -1.7
HERC1-215ENST00000561436 PRAM1Q96QH2 718 aa4.42□□□□□ -1.7
HERC1-215ENST00000561436 TRIB1Q96RU8 372 aa4.42□□□□□ -1.7
HERC1-215ENST00000561436 HEPHQ9BQS7 1158 aa4.42□□□□□ -1.7
HERC1-215ENST00000561436 WDR11Q9BZH6 1224 aa4.42□□□□□ -1.7
HERC1-215ENST00000561436 SMURF2Q9HAU4 748 aa4.42□□□□□ -1.7
HERC1-215ENST00000561436 COL20A1Q9P218 1284 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms