RNA–Protein interactions for RNA: ENST00000561268.5

SPG11-224, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 4

Gene SPG11, Length 530 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-224ENST00000561268 AFMP43652 599 aa7.34□□□□□ -1.23
SPG11-224ENST00000561268 GPR15P49685 360 aa7.34□□□□□ -1.23
SPG11-224ENST00000561268 AP3M2P53677 418 aa7.34□□□□□ -1.23
SPG11-224ENST00000561268 RPL10AP62906 217 aaKnown RBP7.34□□□□□ -1.23
SPG11-224ENST00000561268 NOP14P78316 857 aaKnown RBP7.34□□□□□ -1.23
SPG11-224ENST00000561268 FOXK1P85037 733 aa7.34□□□□□ -1.23
SPG11-224ENST00000561268 CCZ1BP86790 482 aa7.34□□□□□ -1.23
SPG11-224ENST00000561268 CCZ1P86791 482 aaPredicted RBP7.34□□□□□ -1.23
SPG11-224ENST00000561268 TUBB2AQ13885 445 aa7.34□□□□□ -1.23
SPG11-224ENST00000561268 GAS6Q14393 721 aa7.34□□□□□ -1.23
SPG11-224ENST00000561268 KCNB1Q14721 858 aa7.34□□□□□ -1.23
SPG11-224ENST00000561268 UBXN2BQ14CS0 331 aa7.34□□□□□ -1.23
SPG11-224ENST00000561268 MAPRE1Q15691 268 aaKnown RBP7.34□□□□□ -1.23
SPG11-224ENST00000561268 ZACNQ401N2 412 aa7.34□□□□□ -1.23
SPG11-224ENST00000561268 KMT5BQ4FZB7 885 aa7.34□□□□□ -1.23
SPG11-224ENST00000561268 ARHGAP15Q53QZ3 475 aa7.34□□□□□ -1.23
SPG11-224ENST00000561268 COBLL1Q53SF7 1204 aa7.34□□□□□ -1.23
SPG11-224ENST00000561268 C1orf220Q5T0J3 134 aa7.34□□□□□ -1.23
SPG11-224ENST00000561268 GPR158Q5T848 1215 aa7.34□□□□□ -1.23
SPG11-224ENST00000561268 TDRD10Q5VZ19 366 aaKnown RBP7.34□□□□□ -1.23
SPG11-224ENST00000561268 CEP135Q66GS9 1140 aa7.34□□□□□ -1.23
SPG11-224ENST00000561268 ZC3H14Q6PJT7 736 aaKnown RBP7.34□□□□□ -1.23
SPG11-224ENST00000561268 MON1AQ86VX9 555 aa7.34□□□□□ -1.23
SPG11-224ENST00000561268 RALGPS2Q86X27 583 aaPredicted RBP7.34□□□□□ -1.23
SPG11-224ENST00000561268 NELFCDQ8IXH7 590 aa7.34□□□□□ -1.23
SPG11-224ENST00000561268 ZC3H3Q8IXZ2 948 aaKnown RBP7.34□□□□□ -1.23
SPG11-224ENST00000561268 CELF5Q8N6W0 485 aaKnown RBP7.34□□□□□ -1.23
SPG11-224ENST00000561268 MLKLQ8NB16 471 aa7.34□□□□□ -1.23
SPG11-224ENST00000561268 BPIFB1Q8TDL5 484 aa7.34□□□□□ -1.23
SPG11-224ENST00000561268 USP13Q92995 863 aaPredicted RBP7.34□□□□□ -1.23
SPG11-224ENST00000561268 MYLPFQ96A32 169 aa7.34□□□□□ -1.23
SPG11-224ENST00000561268 PCED1BQ96HM7 432 aa7.34□□□□□ -1.23
SPG11-224ENST00000561268 DUSP9Q99956 384 aaKnown RBP7.34□□□□□ -1.23
SPG11-224ENST00000561268 TUBB2BQ9BVA1 445 aa7.34□□□□□ -1.23
SPG11-224ENST00000561268 SLC46A2Q9BY10 475 aa7.34□□□□□ -1.23
SPG11-224ENST00000561268 FAM126AQ9BYI3 521 aaPredicted RBP7.34□□□□□ -1.23
SPG11-224ENST00000561268 BCO2Q9BYV7 579 aa7.34□□□□□ -1.23
SPG11-224ENST00000561268 EPC1Q9H2F5 836 aa7.34□□□□□ -1.23
SPG11-224ENST00000561268 ATXN3LQ9H3M9 355 aa7.34□□□□□ -1.23
SPG11-224ENST00000561268 GOLPH3LQ9H4A5 285 aa7.34□□□□□ -1.23
SPG11-224ENST00000561268 SLC39A2Q9NP94 309 aa7.34□□□□□ -1.23
SPG11-224ENST00000561268 HPS4Q9NQG7 708 aa7.34□□□□□ -1.23
SPG11-224ENST00000561268 EXOC1Q9NV70 894 aa7.34□□□□□ -1.23
SPG11-224ENST00000561268 GTF3C4Q9UKN8 822 aa7.34□□□□□ -1.23
SPG11-224ENST00000561268 PCDHGA2Q9Y5H1 932 aa7.34□□□□□ -1.23
SPG11-224ENST00000561268 PIAS3Q9Y6X2 628 aa7.34□□□□□ -1.23
SPG11-224ENST00000561268 ABCA7Q8IZY2 2146 aa7.33□□□□□ -1.24
SPG11-224ENST00000561268 CACNA1EQ15878 2313 aa7.33□□□□□ -1.24
SPG11-224ENST00000561268 A0A1B0GVL5 298 aa7.33□□□□□ -1.24
SPG11-224ENST00000561268 FAM92AA1XBS5 289 aa7.33□□□□□ -1.24
SPG11-224ENST00000561268 FAM170BA6NMN3 283 aa7.33□□□□□ -1.24
SPG11-224ENST00000561268 SLC38A8A6NNN8 435 aa7.33□□□□□ -1.24
SPG11-224ENST00000561268 SPECC1L-ADORA2AF8WAN1 911 aa7.33□□□□□ -1.24
SPG11-224ENST00000561268 CLIC2O15247 247 aa7.33□□□□□ -1.24
SPG11-224ENST00000561268 NCAM2O15394 837 aa7.33□□□□□ -1.24
SPG11-224ENST00000561268 ZSCAN12O43309 604 aa7.33□□□□□ -1.24
SPG11-224ENST00000561268 ATP2C2O75185 946 aa7.33□□□□□ -1.24
SPG11-224ENST00000561268 ZNF202O95125 648 aa7.33□□□□□ -1.24
SPG11-224ENST00000561268 ASS1P00966 412 aaKnown RBP7.33□□□□□ -1.24
SPG11-224ENST00000561268 OAS1P00973 400 aaKnown RBP7.33□□□□□ -1.24
SPG11-224ENST00000561268 CST3P01034 146 aaPredicted RBP7.33□□□□□ -1.24
SPG11-224ENST00000561268 KRT19P08727 400 aa7.33□□□□□ -1.24
SPG11-224ENST00000561268 RFX1P22670 979 aa7.33□□□□□ -1.24
SPG11-224ENST00000561268 CYP2F1P24903 491 aa7.33□□□□□ -1.24
SPG11-224ENST00000561268 LMO2P25791 158 aa7.33□□□□□ -1.24
SPG11-224ENST00000561268 ERCC5P28715 1186 aaPredicted RBP7.33□□□□□ -1.24
SPG11-224ENST00000561268 HOXA6P31267 233 aa7.33□□□□□ -1.24
SPG11-224ENST00000561268 SYKP43405 635 aa7.33□□□□□ -1.24
SPG11-224ENST00000561268 CASP4P49662 377 aa7.33□□□□□ -1.24
SPG11-224ENST00000561268 CYP2J2P51589 502 aa7.33□□□□□ -1.24
SPG11-224ENST00000561268 NDUFA8P51970 172 aa7.33□□□□□ -1.24
SPG11-224ENST00000561268 PSMC1P62191 440 aaKnown RBP7.33□□□□□ -1.24
SPG11-224ENST00000561268 MYL5Q02045 173 aa7.33□□□□□ -1.24
SPG11-224ENST00000561268 DMTNQ08495 405 aa7.33□□□□□ -1.24
SPG11-224ENST00000561268 INCA1Q0VD86 236 aa7.33□□□□□ -1.24
SPG11-224ENST00000561268 TPD52L1Q16890 204 aaPredicted RBP7.33□□□□□ -1.24
SPG11-224ENST00000561268 TXNDC11Q6PKC3 985 aa7.33□□□□□ -1.24
SPG11-224ENST00000561268 KRBA2Q6ZNG9 492 aa7.33□□□□□ -1.24
SPG11-224ENST00000561268 C4orf50Q6ZRC1 276 aa7.33□□□□□ -1.24
SPG11-224ENST00000561268 GUF1Q8N442 669 aaKnown RBP7.33□□□□□ -1.24
SPG11-224ENST00000561268 ZNF454Q8N9F8 522 aa7.33□□□□□ -1.24
SPG11-224ENST00000561268 SPC24Q8NBT2 197 aa7.33□□□□□ -1.24
SPG11-224ENST00000561268 B3GALNT2Q8NCR0 500 aa7.33□□□□□ -1.24
SPG11-224ENST00000561268 STKLD1Q8NE28 680 aa7.33□□□□□ -1.24
SPG11-224ENST00000561268 ZNF397Q8NF99 534 aaPredicted RBP7.33□□□□□ -1.24
SPG11-224ENST00000561268 SPATA20Q8TB22 786 aa7.33□□□□□ -1.24
SPG11-224ENST00000561268 MYCBPAPQ8TBZ2 947 aa7.33□□□□□ -1.24
SPG11-224ENST00000561268 WNT2BQ93097 391 aa7.33□□□□□ -1.24
SPG11-224ENST00000561268 C8orf48Q96LL4 319 aa7.33□□□□□ -1.24
SPG11-224ENST00000561268 ZNF830Q96NB3 372 aaPredicted RBP7.33□□□□□ -1.24
SPG11-224ENST00000561268 GCNAQ96QF7 691 aa7.33□□□□□ -1.24
SPG11-224ENST00000561268 FNBP1Q96RU3 617 aa7.33□□□□□ -1.24
SPG11-224ENST00000561268 MRPL45Q9BRJ2 306 aaKnown RBP7.33□□□□□ -1.24
SPG11-224ENST00000561268 PI4K2AQ9BTU6 479 aa7.33□□□□□ -1.24
SPG11-224ENST00000561268 ELOVL4Q9GZR5 314 aa7.33□□□□□ -1.24
SPG11-224ENST00000561268 SLITRK6Q9H5Y7 841 aa7.33□□□□□ -1.24
SPG11-224ENST00000561268 FAM53CQ9NYF3 392 aa7.33□□□□□ -1.24
SPG11-224ENST00000561268 IL37Q9NZH6 218 aa7.33□□□□□ -1.24
SPG11-224ENST00000561268 CCL26Q9Y258 94 aa7.33□□□□□ -1.24
SPG11-224ENST00000561268 PCDH15Q96QU1 1955 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms