RNA–Protein interactions for RNA: ENST00000560679.1

TPM1-225, Transcript of tropomyosin 1, humanhuman

TSL 3

Gene TPM1, Length 292 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-225ENST00000560679 SLCO6A1Q86UG4 719 aa10.62□□□□□ -0.71
TPM1-225ENST00000560679 MIB1Q86YT6 1006 aa10.62□□□□□ -0.71
TPM1-225ENST00000560679 SCN4BQ8IWT1 228 aa10.62□□□□□ -0.71
TPM1-225ENST00000560679 ADGRG2Q8IZP9 1017 aa10.62□□□□□ -0.71
TPM1-225ENST00000560679 PGBD3Q8N328 593 aa10.62□□□□□ -0.71
TPM1-225ENST00000560679 C1orf127Q8N9H9 656 aa10.62□□□□□ -0.71
TPM1-225ENST00000560679 FSIP1Q8NA03 581 aa10.62□□□□□ -0.71
TPM1-225ENST00000560679 HSPA12BQ96MM6 686 aa10.62□□□□□ -0.71
TPM1-225ENST00000560679 ZNF560Q96MR9 790 aa10.62□□□□□ -0.71
TPM1-225ENST00000560679 KIF2CQ99661 725 aa10.62□□□□□ -0.71
TPM1-225ENST00000560679 RNF38Q9H0F5 515 aa10.62□□□□□ -0.71
TPM1-225ENST00000560679 CD93Q9NPY3 652 aa10.62□□□□□ -0.71
TPM1-225ENST00000560679 ARHGEF4Q9NR80 690 aa10.62□□□□□ -0.71
TPM1-225ENST00000560679 ODF2LQ9ULJ1 636 aa10.62□□□□□ -0.71
TPM1-225ENST00000560679 NOL7Q9UMY1 257 aaKnown RBP10.62□□□□□ -0.71
TPM1-225ENST00000560679 CPQQ9Y646 472 aa10.62□□□□□ -0.71
TPM1-225ENST00000560679 STYXL1Q9Y6J8 313 aa10.62□□□□□ -0.71
TPM1-225ENST00000560679 A0A1W2PQD8 194 aa10.61□□□□□ -0.71
TPM1-225ENST00000560679 A0A1W2PQF6 199 aa10.61□□□□□ -0.71
TPM1-225ENST00000560679 LAD1O00515 517 aa10.61□□□□□ -0.71
TPM1-225ENST00000560679 PRB1P04280 392 aa10.61□□□□□ -0.71
TPM1-225ENST00000560679 ITGB3P05106 788 aa10.61□□□□□ -0.71
TPM1-225ENST00000560679 ADH5P11766 374 aa10.61□□□□□ -0.71
TPM1-225ENST00000560679 ADSSP30520 456 aa10.61□□□□□ -0.71
TPM1-225ENST00000560679 GRIA2P42262 883 aa10.61□□□□□ -0.71
TPM1-225ENST00000560679 SLC14A1Q13336 389 aa10.61□□□□□ -0.71
TPM1-225ENST00000560679 BYSLQ13895 437 aaKnown RBP10.61□□□□□ -0.71
TPM1-225ENST00000560679 RABEP1Q15276 862 aa10.61□□□□□ -0.71
TPM1-225ENST00000560679 ADALQ6DHV7 355 aa10.61□□□□□ -0.71
TPM1-225ENST00000560679 SLC36A4Q6YBV0 504 aa10.61□□□□□ -0.71
TPM1-225ENST00000560679 DTHD1Q6ZMT9 781 aa10.61□□□□□ -0.71
TPM1-225ENST00000560679 TOGARAM2Q6ZUX3 1019 aa10.61□□□□□ -0.71
TPM1-225ENST00000560679 RABEPKQ7Z6M1 372 aa10.61□□□□□ -0.71
TPM1-225ENST00000560679 MARCH9Q86YJ5 346 aa10.61□□□□□ -0.71
TPM1-225ENST00000560679 ETFBKMTQ8IXQ9 262 aa10.61□□□□□ -0.71
TPM1-225ENST00000560679 TRIML1Q8N9V2 468 aa10.61□□□□□ -0.71
TPM1-225ENST00000560679 GLIS3Q8NEA6 775 aa10.61□□□□□ -0.71
TPM1-225ENST00000560679 ZSWIM2Q8NEG5 633 aa10.61□□□□□ -0.71
TPM1-225ENST00000560679 FUBP3Q96I24 572 aaKnown RBP eCLIP10.61□□□□□ -0.71
TPM1-225ENST00000560679 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.61□□□□□ -0.71
TPM1-225ENST00000560679 SMPD4Q9NXE4 827 aa10.61□□□□□ -0.71
TPM1-225ENST00000560679 TOR4AQ9NXH8 423 aa10.61□□□□□ -0.71
TPM1-225ENST00000560679 DKK4Q9UBT3 224 aa10.61□□□□□ -0.71
TPM1-225ENST00000560679 PCOLCE2Q9UKZ9 415 aa10.61□□□□□ -0.71
TPM1-225ENST00000560679 ASXL3Q9C0F0 2248 aa10.61□□□□□ -0.71
TPM1-225ENST00000560679 ZNF462Q96JM2 2506 aa10.6□□□□□ -0.71
TPM1-225ENST00000560679 URB1O60287 2271 aaKnown RBP10.6□□□□□ -0.71
TPM1-225ENST00000560679 ZNF840PA6NDX5 716 aa10.6□□□□□ -0.71
TPM1-225ENST00000560679 MYMKA6NI61 221 aa10.6□□□□□ -0.71
TPM1-225ENST00000560679 CYSRT1A8MQ03 144 aa10.6□□□□□ -0.71
TPM1-225ENST00000560679 GABRDO14764 452 aa10.6□□□□□ -0.71
TPM1-225ENST00000560679 ATP2C2O75185 946 aa10.6□□□□□ -0.71
TPM1-225ENST00000560679 DKK1O94907 266 aa10.6□□□□□ -0.71
TPM1-225ENST00000560679 OAS1P00973 400 aaKnown RBP10.6□□□□□ -0.71
TPM1-225ENST00000560679 SYPP08247 313 aa10.6□□□□□ -0.71
TPM1-225ENST00000560679 PFKLP17858 780 aa10.6□□□□□ -0.71
TPM1-225ENST00000560679 NDUFV2P19404 249 aa10.6□□□□□ -0.71
TPM1-225ENST00000560679 MAGEA11P43364 429 aa10.6□□□□□ -0.71
TPM1-225ENST00000560679 TNFRSF4P43489 277 aa10.6□□□□□ -0.71
TPM1-225ENST00000560679 PSMC1P62191 440 aaKnown RBP10.6□□□□□ -0.71
TPM1-225ENST00000560679 GTF2BQ00403 316 aa10.6□□□□□ -0.71
TPM1-225ENST00000560679 MYL7Q01449 175 aa10.6□□□□□ -0.71
TPM1-225ENST00000560679 GRIK2Q13002 908 aa10.6□□□□□ -0.71
TPM1-225ENST00000560679 GNL2Q13823 731 aaKnown RBP10.6□□□□□ -0.71
TPM1-225ENST00000560679 LY6G5CQ5SRR4 150 aa10.6□□□□□ -0.71
TPM1-225ENST00000560679 FAM171BQ6P995 826 aa10.6□□□□□ -0.71
TPM1-225ENST00000560679 GLRX5Q86SX6 157 aa10.6□□□□□ -0.71
TPM1-225ENST00000560679 GPBP1Q86WP2 473 aa10.6□□□□□ -0.71
TPM1-225ENST00000560679 SPATA2LQ8IUW3 424 aaPredicted RBP10.6□□□□□ -0.71
TPM1-225ENST00000560679 CCDC83Q8IWF9 413 aa10.6□□□□□ -0.71
TPM1-225ENST00000560679 ADGRF2Q8IZF7 708 aa10.6□□□□□ -0.71
TPM1-225ENST00000560679 TMEM86AQ8N2M4 240 aa10.6□□□□□ -0.71
TPM1-225ENST00000560679 MYCT1Q8N699 235 aa10.6□□□□□ -0.71
TPM1-225ENST00000560679 ZNF513Q8N8E2 541 aaPredicted RBP10.6□□□□□ -0.71
TPM1-225ENST00000560679 KIAA1958Q8N8K9 716 aa10.6□□□□□ -0.71
TPM1-225ENST00000560679 BAHD1Q8TBE0 780 aaPredicted RBP10.6□□□□□ -0.71
TPM1-225ENST00000560679 MYLPFQ96A32 169 aa10.6□□□□□ -0.71
TPM1-225ENST00000560679 SPATA17Q96L03 361 aa10.6□□□□□ -0.71
TPM1-225ENST00000560679 TTLL2Q9BWV7 592 aa10.6□□□□□ -0.71
TPM1-225ENST00000560679 PARVGQ9HBI0 331 aa10.6□□□□□ -0.71
TPM1-225ENST00000560679 TMEM30AQ9NV96 361 aa10.6□□□□□ -0.71
TPM1-225ENST00000560679 CFAP97Q9P2B7 532 aa10.6□□□□□ -0.71
TPM1-225ENST00000560679 AGO2Q9UKV8 859 aaKnown RBP10.6□□□□□ -0.71
TPM1-225ENST00000560679 CYP8B1Q9UNU6 501 aa10.6□□□□□ -0.71
TPM1-225ENST00000560679 A0A087WV48 116 aa10.59□□□□□ -0.71
TPM1-225ENST00000560679 PALM2-AKAP2B1ALY0 433 aaPredicted RBP10.59□□□□□ -0.71
TPM1-225ENST00000560679 TRIM24O15164 1050 aa10.59□□□□□ -0.71
TPM1-225ENST00000560679 TRAK2O60296 914 aa10.59□□□□□ -0.71
TPM1-225ENST00000560679 FAM13AO94988 1023 aa10.59□□□□□ -0.71
TPM1-225ENST00000560679 IL18RAPO95256 599 aa10.59□□□□□ -0.71
TPM1-225ENST00000560679 ADH1CP00326 375 aa10.59□□□□□ -0.71
TPM1-225ENST00000560679 HOXB2P14652 356 aa10.59□□□□□ -0.71
TPM1-225ENST00000560679 SCP2P22307 547 aa10.59□□□□□ -0.71
TPM1-225ENST00000560679 PNPLA4P41247 253 aa10.59□□□□□ -0.71
TPM1-225ENST00000560679 WASP42768 502 aa10.59□□□□□ -0.71
TPM1-225ENST00000560679 PDE6CP51160 858 aa10.59□□□□□ -0.71
TPM1-225ENST00000560679 POU5F1Q01860 360 aaKnown RBP10.59□□□□□ -0.71
TPM1-225ENST00000560679 SOWAHAQ2M3V2 549 aa10.59□□□□□ -0.71
TPM1-225ENST00000560679 PLEKHG6Q3KR16 790 aa10.59□□□□□ -0.71
TPM1-225ENST00000560679 EGFLAMQ63HQ2 1017 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms