RNA–Protein interactions for RNA: ENST00000559937.1

SMAD3-212, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 579 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-212ENST00000559937 OAS1P00973 400 aaKnown RBP8.46□□□□□ -1.06
SMAD3-212ENST00000559937 VIMP08670 466 aaKnown RBP8.46□□□□□ -1.06
SMAD3-212ENST00000559937 DARSP14868 501 aaKnown RBP8.46□□□□□ -1.06
SMAD3-212ENST00000559937 ATP2A2P16615 1042 aaKnown RBP8.46□□□□□ -1.06
SMAD3-212ENST00000559937 CYP3A5P20815 502 aa8.46□□□□□ -1.06
SMAD3-212ENST00000559937 TGM2P21980 687 aa8.46□□□□□ -1.06
SMAD3-212ENST00000559937 HOXA11P31270 313 aaPredicted RBP8.46□□□□□ -1.06
SMAD3-212ENST00000559937 RPL22P35268 128 aaKnown RBP8.46□□□□□ -1.06
SMAD3-212ENST00000559937 PNPLA4P41247 253 aa8.46□□□□□ -1.06
SMAD3-212ENST00000559937 PTPN9P43378 593 aa8.46□□□□□ -1.06
SMAD3-212ENST00000559937 RPL34P49207 117 aaKnown RBP8.46□□□□□ -1.06
SMAD3-212ENST00000559937 CTCFP49711 727 aaPredicted RBP8.46□□□□□ -1.06
SMAD3-212ENST00000559937 SLC6A3Q01959 620 aa8.46□□□□□ -1.06
SMAD3-212ENST00000559937 ROR1Q01973 937 aa8.46□□□□□ -1.06
SMAD3-212ENST00000559937 GOLGA7BQ2TAP0 167 aa8.46□□□□□ -1.06
SMAD3-212ENST00000559937 KLHL38Q2WGJ6 581 aa8.46□□□□□ -1.06
SMAD3-212ENST00000559937 CCDC38Q502W7 563 aa8.46□□□□□ -1.06
SMAD3-212ENST00000559937 XKR4Q5GH76 650 aa8.46□□□□□ -1.06
SMAD3-212ENST00000559937 RNF187Q5TA31 235 aaPredicted RBP8.46□□□□□ -1.06
SMAD3-212ENST00000559937 MAP1SQ66K74 1059 aaPredicted RBP8.46□□□□□ -1.06
SMAD3-212ENST00000559937 OLFML1Q6UWY5 402 aa8.46□□□□□ -1.06
SMAD3-212ENST00000559937 RGS9BPQ6ZS82 235 aa8.46□□□□□ -1.06
SMAD3-212ENST00000559937 FAM183BPQ6ZVS7 135 aa8.46□□□□□ -1.06
SMAD3-212ENST00000559937 CYP4V2Q6ZWL3 525 aaPredicted RBP8.46□□□□□ -1.06
SMAD3-212ENST00000559937 CATSPER4Q7RTX7 472 aa8.46□□□□□ -1.06
SMAD3-212ENST00000559937 TMEM110Q86TL2 294 aa8.46□□□□□ -1.06
SMAD3-212ENST00000559937 EMC1Q8N766 993 aa8.46□□□□□ -1.06
SMAD3-212ENST00000559937 RXFP2Q8WXD0 754 aa8.46□□□□□ -1.06
SMAD3-212ENST00000559937 CPT1BQ92523 772 aa8.46□□□□□ -1.06
SMAD3-212ENST00000559937 RTP4Q96DX8 246 aa8.46□□□□□ -1.06
SMAD3-212ENST00000559937 MAGEB18Q96M61 343 aa8.46□□□□□ -1.06
SMAD3-212ENST00000559937 ZNF560Q96MR9 790 aa8.46□□□□□ -1.06
SMAD3-212ENST00000559937 RNF157Q96PX1 679 aa8.46□□□□□ -1.06
SMAD3-212ENST00000559937 ACSS3Q9H6R3 686 aa8.46□□□□□ -1.06
SMAD3-212ENST00000559937 DNAJC17Q9NVM6 304 aaKnown RBP8.46□□□□□ -1.06
SMAD3-212ENST00000559937 GDAP2Q9NXN4 497 aa8.46□□□□□ -1.06
SMAD3-212ENST00000559937 PSMC3IPQ9P2W1 217 aaPredicted RBP8.46□□□□□ -1.06
SMAD3-212ENST00000559937 CLEC11AQ9Y240 323 aa8.46□□□□□ -1.06
SMAD3-212ENST00000559937 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.46□□□□□ -1.06
SMAD3-212ENST00000559937 TSC2P49815 1807 aa8.45□□□□□ -1.06
SMAD3-212ENST00000559937 BCLAF3A2AJT9 711 aaKnown RBP8.45□□□□□ -1.06
SMAD3-212ENST00000559937 FAM47DPA6NHR8 397 aa8.45□□□□□ -1.06
SMAD3-212ENST00000559937 RASA4BC9J798 803 aa8.45□□□□□ -1.06
SMAD3-212ENST00000559937 ANKRD65E5RJM6 399 aa8.45□□□□□ -1.06
SMAD3-212ENST00000559937 E5RJQ4 531 aa8.45□□□□□ -1.06
SMAD3-212ENST00000559937 HAS3O00219 553 aa8.45□□□□□ -1.06
SMAD3-212ENST00000559937 MDM4O15151 490 aa8.45□□□□□ -1.06
SMAD3-212ENST00000559937 RASA4O43374 803 aa8.45□□□□□ -1.06
SMAD3-212ENST00000559937 SNX3O60493 162 aa8.45□□□□□ -1.06
SMAD3-212ENST00000559937 CSDE1O75534 798 aaKnown RBP8.45□□□□□ -1.06
SMAD3-212ENST00000559937 ZNF189O75820 626 aaPredicted RBP8.45□□□□□ -1.06
SMAD3-212ENST00000559937 DNAJC8O75937 253 aaPredicted RBP8.45□□□□□ -1.06
SMAD3-212ENST00000559937 SUN1O94901 812 aa8.45□□□□□ -1.06
SMAD3-212ENST00000559937 IFNB1P01574 187 aa8.45□□□□□ -1.06
SMAD3-212ENST00000559937 GSTA2P09210 222 aa8.45□□□□□ -1.06
SMAD3-212ENST00000559937 ZSCAN5DPP0CG00 497 aa8.45□□□□□ -1.06
SMAD3-212ENST00000559937 RBP3P10745 1247 aa8.45□□□□□ -1.06
SMAD3-212ENST00000559937 ETS1P14921 441 aa8.45□□□□□ -1.06
SMAD3-212ENST00000559937 KCNE1P15382 129 aa8.45□□□□□ -1.06
SMAD3-212ENST00000559937 PDGFRAP16234 1089 aa8.45□□□□□ -1.06
SMAD3-212ENST00000559937 ZFXP17010 805 aaPredicted RBP8.45□□□□□ -1.06
SMAD3-212ENST00000559937 GCAP28676 217 aa8.45□□□□□ -1.06
SMAD3-212ENST00000559937 SDC4P31431 198 aa8.45□□□□□ -1.06
SMAD3-212ENST00000559937 STX2P32856 288 aa8.45□□□□□ -1.06
SMAD3-212ENST00000559937 MAGEA6P43360 314 aa8.45□□□□□ -1.06
SMAD3-212ENST00000559937 ACADSBP45954 432 aa8.45□□□□□ -1.06
SMAD3-212ENST00000559937 BCAT1P54687 386 aa8.45□□□□□ -1.06
SMAD3-212ENST00000559937 CDH6P55285 790 aa8.45□□□□□ -1.06
SMAD3-212ENST00000559937 ADAM17P78536 824 aa8.45□□□□□ -1.06
SMAD3-212ENST00000559937 IL9RQ01113 521 aa8.45□□□□□ -1.06
SMAD3-212ENST00000559937 RNASELQ05823 741 aaKnown RBP8.45□□□□□ -1.06
SMAD3-212ENST00000559937 BST2Q10589 180 aaKnown RBP8.45□□□□□ -1.06
SMAD3-212ENST00000559937 PDIA2Q13087 525 aaKnown RBP8.45□□□□□ -1.06
SMAD3-212ENST00000559937 DPYSL3Q14195 570 aa8.45□□□□□ -1.06
SMAD3-212ENST00000559937 TMED2Q15363 201 aa8.45□□□□□ -1.06
SMAD3-212ENST00000559937 SMTNL2Q2TAL5 461 aa8.45□□□□□ -1.06
SMAD3-212ENST00000559937 ANKRD20A8PQ5CZ79 823 aa8.45□□□□□ -1.06
SMAD3-212ENST00000559937 PPP1R26Q5T8A7 1209 aaPredicted RBP8.45□□□□□ -1.06
SMAD3-212ENST00000559937 SPRYD7Q5W111 196 aa8.45□□□□□ -1.06
SMAD3-212ENST00000559937 CYP4F22Q6NT55 531 aa8.45□□□□□ -1.06
SMAD3-212ENST00000559937 ALKAL1Q6UXT8 129 aa8.45□□□□□ -1.06
SMAD3-212ENST00000559937 LIMS2Q7Z4I7 341 aa8.45□□□□□ -1.06
SMAD3-212ENST00000559937 SRRM1Q8IYB3 904 aaKnown RBP8.45□□□□□ -1.06
SMAD3-212ENST00000559937 ZBED8Q8IZ13 594 aa8.45□□□□□ -1.06
SMAD3-212ENST00000559937 CRYBG2Q8N1P7 616 aa8.45□□□□□ -1.06
SMAD3-212ENST00000559937 GBP7Q8N8V2 638 aaPredicted RBP8.45□□□□□ -1.06
SMAD3-212ENST00000559937 UBA3Q8TBC4 463 aa8.45□□□□□ -1.06
SMAD3-212ENST00000559937 SLC35F5Q8WV83 523 aa8.45□□□□□ -1.06
SMAD3-212ENST00000559937 ALKBH8Q96BT7 664 aaKnown RBP8.45□□□□□ -1.06
SMAD3-212ENST00000559937 ACSF2Q96CM8 615 aaPredicted RBP8.45□□□□□ -1.06
SMAD3-212ENST00000559937 HAUS1Q96CS2 278 aa8.45□□□□□ -1.06
SMAD3-212ENST00000559937 FAF2Q96CS3 445 aa8.45□□□□□ -1.06
SMAD3-212ENST00000559937 PWWP2AQ96N64 755 aa8.45□□□□□ -1.06
SMAD3-212ENST00000559937 PEBP4Q96S96 227 aa8.45□□□□□ -1.06
SMAD3-212ENST00000559937 PPP1R16BQ96T49 567 aa8.45□□□□□ -1.06
SMAD3-212ENST00000559937 ZNF670Q9BS34 389 aa8.45□□□□□ -1.06
SMAD3-212ENST00000559937 DHRS4Q9BTZ2 278 aa8.45□□□□□ -1.06
SMAD3-212ENST00000559937 MAK16Q9BXY0 300 aaKnown RBP8.45□□□□□ -1.06
SMAD3-212ENST00000559937 OSBPL7Q9BZF2 842 aa8.45□□□□□ -1.06
SMAD3-212ENST00000559937 VPS37BQ9H9H4 285 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms