RNA–Protein interactions for RNA: ENST00000559550.1

CASC4-210, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 264 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-210ENST00000559550 IZUMO1Q8IYV9 350 aa4.03□□□□□ -1.76
CASC4-210ENST00000559550 BOLLQ8N9W6 283 aaKnown RBP4.03□□□□□ -1.76
CASC4-210ENST00000559550 SOCS4Q8WXH5 440 aa4.03□□□□□ -1.76
CASC4-210ENST00000559550 HAPLN3Q96S86 360 aa4.03□□□□□ -1.76
CASC4-210ENST00000559550 STRBPQ96SI9 672 aaKnown RBP4.03□□□□□ -1.76
CASC4-210ENST00000559550 TBCBQ99426 244 aa4.03□□□□□ -1.76
CASC4-210ENST00000559550 UNKQ9C0B0 810 aaKnown RBP4.03□□□□□ -1.76
CASC4-210ENST00000559550 GEMIN8Q9NWZ8 242 aaKnown RBP4.03□□□□□ -1.76
CASC4-210ENST00000559550 ARPP21Q9UBL0 812 aaPredicted RBP4.03□□□□□ -1.76
CASC4-210ENST00000559550 SPATA31A6Q5VVP1 1343 aa4.02□□□□□ -1.77
CASC4-210ENST00000559550 COL11A2P13942 1736 aaPredicted RBP4.02□□□□□ -1.77
CASC4-210ENST00000559550 POM121BA6NF01 834 aa4.02□□□□□ -1.77
CASC4-210ENST00000559550 H0YIZ8 118 aa4.02□□□□□ -1.77
CASC4-210ENST00000559550 CCP110O43303 1012 aa4.02□□□□□ -1.77
CASC4-210ENST00000559550 PRC1O43663 620 aa4.02□□□□□ -1.77
CASC4-210ENST00000559550 ORC4O43929 436 aa4.02□□□□□ -1.77
CASC4-210ENST00000559550 MYL3P08590 195 aa4.02□□□□□ -1.77
CASC4-210ENST00000559550 HGFP14210 728 aa4.02□□□□□ -1.77
CASC4-210ENST00000559550 TSHRP16473 764 aa4.02□□□□□ -1.77
CASC4-210ENST00000559550 RPL17P18621 184 aaKnown RBP4.02□□□□□ -1.77
CASC4-210ENST00000559550 WT1P19544 449 aaPredicted RBP4.02□□□□□ -1.77
CASC4-210ENST00000559550 BTF3P20290 206 aaKnown RBP4.02□□□□□ -1.77
CASC4-210ENST00000559550 ACVR2AP27037 513 aa4.02□□□□□ -1.77
CASC4-210ENST00000559550 CTGFP29279 349 aa4.02□□□□□ -1.77
CASC4-210ENST00000559550 ALDH9A1P49189 494 aa4.02□□□□□ -1.77
CASC4-210ENST00000559550 CASP5P51878 434 aa4.02□□□□□ -1.77
CASC4-210ENST00000559550 BCAT1P54687 386 aa4.02□□□□□ -1.77
CASC4-210ENST00000559550 PDE1AP54750 535 aa4.02□□□□□ -1.77
CASC4-210ENST00000559550 DAG1Q14118 895 aa4.02□□□□□ -1.77
CASC4-210ENST00000559550 ARHGEF7Q14155 803 aa4.02□□□□□ -1.77
CASC4-210ENST00000559550 SLC29A2Q14542 456 aa4.02□□□□□ -1.77
CASC4-210ENST00000559550 KCNAB1Q14722 419 aa4.02□□□□□ -1.77
CASC4-210ENST00000559550 INSCQ1MX18 579 aa4.02□□□□□ -1.77
CASC4-210ENST00000559550 PLAC9Q5JTB6 97 aa4.02□□□□□ -1.77
CASC4-210ENST00000559550 CERCAMQ5T4B2 595 aa4.02□□□□□ -1.77
CASC4-210ENST00000559550 DPY19L3Q6ZPD9 716 aa4.02□□□□□ -1.77
CASC4-210ENST00000559550 CAND1Q86VP6 1230 aaKnown RBP4.02□□□□□ -1.77
CASC4-210ENST00000559550 SPARTQ8N0X7 666 aa4.02□□□□□ -1.77
CASC4-210ENST00000559550 LRRC71Q8N4P6 559 aa4.02□□□□□ -1.77
CASC4-210ENST00000559550 RNF152Q8N8N0 203 aa4.02□□□□□ -1.77
CASC4-210ENST00000559550 C9orf106Q8NAJ2 232 aa4.02□□□□□ -1.77
CASC4-210ENST00000559550 XAGE5Q8WWM1 108 aa4.02□□□□□ -1.77
CASC4-210ENST00000559550 SARAFQ96BY9 339 aa4.02□□□□□ -1.77
CASC4-210ENST00000559550 ZBTB45Q96K62 511 aaPredicted RBP4.02□□□□□ -1.77
CASC4-210ENST00000559550 BRIP1Q9BX63 1249 aa4.02□□□□□ -1.77
CASC4-210ENST00000559550 TRIM5Q9C035 493 aa4.02□□□□□ -1.77
CASC4-210ENST00000559550 ARNT2Q9HBZ2 717 aa4.02□□□□□ -1.77
CASC4-210ENST00000559550 DUSP22Q9NRW4 184 aa4.02□□□□□ -1.77
CASC4-210ENST00000559550 GJB4Q9NTQ9 266 aa4.02□□□□□ -1.77
CASC4-210ENST00000559550 TBC1D23Q9NUY8 699 aa4.02□□□□□ -1.77
CASC4-210ENST00000559550 DKK4Q9UBT3 224 aa4.02□□□□□ -1.77
CASC4-210ENST00000559550 SH2B3Q9UQQ2 575 aa4.02□□□□□ -1.77
CASC4-210ENST00000559550 ARHGEF17Q96PE2 2063 aaPredicted RBP4.02□□□□□ -1.77
CASC4-210ENST00000559550 AGPSO00116 658 aa4.01□□□□□ -1.77
CASC4-210ENST00000559550 ZNF213O14771 459 aa4.01□□□□□ -1.77
CASC4-210ENST00000559550 CD3EAPO15446 510 aaKnown RBP4.01□□□□□ -1.77
CASC4-210ENST00000559550 RGS10O43665 173 aa4.01□□□□□ -1.77
CASC4-210ENST00000559550 PIAS2O75928 621 aa4.01□□□□□ -1.77
CASC4-210ENST00000559550 IL18RAPO95256 599 aa4.01□□□□□ -1.77
CASC4-210ENST00000559550 ONECUT2O95948 504 aa4.01□□□□□ -1.77
CASC4-210ENST00000559550 A1BGP04217 495 aa4.01□□□□□ -1.77
CASC4-210ENST00000559550 PARP1P09874 1014 aaKnown RBP4.01□□□□□ -1.77
CASC4-210ENST00000559550 NDUFB7P17568 137 aa4.01□□□□□ -1.77
CASC4-210ENST00000559550 ENGP17813 658 aa4.01□□□□□ -1.77
CASC4-210ENST00000559550 IL1R2P27930 398 aa4.01□□□□□ -1.77
CASC4-210ENST00000559550 UQCRC1P31930 480 aa4.01□□□□□ -1.77
CASC4-210ENST00000559550 CPT1AP50416 773 aa4.01□□□□□ -1.77
CASC4-210ENST00000559550 PROK1P58294 105 aa4.01□□□□□ -1.77
CASC4-210ENST00000559550 CCNIQ14094 377 aa4.01□□□□□ -1.77
CASC4-210ENST00000559550 HLTFQ14527 1009 aaKnown RBP eCLIP4.01□□□□□ -1.77
CASC4-210ENST00000559550 CYP1B1Q16678 543 aa4.01□□□□□ -1.77
CASC4-210ENST00000559550 ZNF750Q32MQ0 723 aa4.01□□□□□ -1.77
CASC4-210ENST00000559550 RRAGBQ5VZM2 374 aa4.01□□□□□ -1.77
CASC4-210ENST00000559550 PLAG1Q6DJT9 500 aa4.01□□□□□ -1.77
CASC4-210ENST00000559550 Q6ZWC4 215 aa4.01□□□□□ -1.77
CASC4-210ENST00000559550 YAF2Q8IY57 180 aa4.01□□□□□ -1.77
CASC4-210ENST00000559550 MACROD1Q9BQ69 325 aa4.01□□□□□ -1.77
CASC4-210ENST00000559550 DHX36Q9H2U1 1008 aaKnown RBP4.01□□□□□ -1.77
CASC4-210ENST00000559550 PNPLA8Q9NP80 782 aa4.01□□□□□ -1.77
CASC4-210ENST00000559550 TRMT13Q9NUP7 481 aaKnown RBP4.01□□□□□ -1.77
CASC4-210ENST00000559550 ZNF212Q9UDV6 495 aa4.01□□□□□ -1.77
CASC4-210ENST00000559550 RGS17Q9UGC6 210 aaPredicted RBP4.01□□□□□ -1.77
CASC4-210ENST00000559550 GABRQQ9UN88 632 aa4.01□□□□□ -1.77
CASC4-210ENST00000559550 A0A087WZ62 844 aa4□□□□□ -1.77
CASC4-210ENST00000559550 GCOM1H8Y6P7 765 aaPredicted RBP4□□□□□ -1.77
CASC4-210ENST00000559550 CAND2O75155 1236 aa4□□□□□ -1.77
CASC4-210ENST00000559550 PDE8BO95263 885 aa4□□□□□ -1.77
CASC4-210ENST00000559550 KRT18P05783 430 aaKnown RBP4□□□□□ -1.77
CASC4-210ENST00000559550 ANXA2P07355 339 aaKnown RBP4□□□□□ -1.77
CASC4-210ENST00000559550 HNRNPCP07910 306 aaKnown RBP eCLIP4□□□□□ -1.77
CASC4-210ENST00000559550 FAM163BP0C2L3 166 aa4□□□□□ -1.77
CASC4-210ENST00000559550 TPH1P17752 444 aa4□□□□□ -1.77
CASC4-210ENST00000559550 GPD1P21695 349 aa4□□□□□ -1.77
CASC4-210ENST00000559550 NTSR1P30989 418 aa4□□□□□ -1.77
CASC4-210ENST00000559550 EEFSECP57772 596 aaKnown RBP4□□□□□ -1.77
CASC4-210ENST00000559550 CYP4F2P78329 520 aa4□□□□□ -1.77
CASC4-210ENST00000559550 TIAL1Q01085 375 aaKnown RBP eCLIP4□□□□□ -1.77
CASC4-210ENST00000559550 STK3Q13188 491 aa4□□□□□ -1.77
CASC4-210ENST00000559550 FAM153CQ494X1 144 aa4□□□□□ -1.77
CASC4-210ENST00000559550 MAP9Q49MG5 647 aa4□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms