RNA–Protein interactions for RNA: ENST00000558763.1

SMAD3-207, Transcript of SMAD family member 3, humanhuman

TSL 2

Gene SMAD3, Length 1,957 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-207ENST00000558763 DEFB103AP81534 67 aa13.61□□□□□ -0.23
SMAD3-207ENST00000558763 TAF5Q15542 800 aa13.61□□□□□ -0.23
SMAD3-207ENST00000558763 RAB6CQ53S08 254 aa13.61□□□□□ -0.23
SMAD3-207ENST00000558763 WSCD1Q658N2 575 aa13.61□□□□□ -0.23
SMAD3-207ENST00000558763 CD300LGQ6UXG3 332 aa13.61□□□□□ -0.23
SMAD3-207ENST00000558763 ZNF365Q70YC5 407 aa13.61□□□□□ -0.23
SMAD3-207ENST00000558763 ANKRD52Q8NB46 1076 aa13.61□□□□□ -0.23
SMAD3-207ENST00000558763 IPO4Q8TEX9 1081 aaKnown RBP13.61□□□□□ -0.23
SMAD3-207ENST00000558763 C1orf54Q8WWF1 131 aa13.61□□□□□ -0.23
SMAD3-207ENST00000558763 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.61□□□□□ -0.23
SMAD3-207ENST00000558763 ZBTB9Q96C00 473 aa13.61□□□□□ -0.23
SMAD3-207ENST00000558763 ACSF2Q96CM8 615 aaPredicted RBP13.61□□□□□ -0.23
SMAD3-207ENST00000558763 HEMGNQ9BXL5 484 aa13.61□□□□□ -0.23
SMAD3-207ENST00000558763 DCLK3Q9C098 648 aa13.61□□□□□ -0.23
SMAD3-207ENST00000558763 RAB6CQ9H0N0 254 aa13.61□□□□□ -0.23
SMAD3-207ENST00000558763 GRHL1Q9NZI5 618 aa13.61□□□□□ -0.23
SMAD3-207ENST00000558763 MTUS1Q9ULD2 1270 aa13.61□□□□□ -0.23
SMAD3-207ENST00000558763 TTC3P53804 2025 aa13.6□□□□□ -0.23
SMAD3-207ENST00000558763 PODXLO00592 558 aa13.6□□□□□ -0.23
SMAD3-207ENST00000558763 CYB561D2O14569 222 aa13.6□□□□□ -0.23
SMAD3-207ENST00000558763 TP73O15350 636 aa13.6□□□□□ -0.23
SMAD3-207ENST00000558763 INPPL1O15357 1258 aa13.6□□□□□ -0.23
SMAD3-207ENST00000558763 HUS1O60921 280 aa13.6□□□□□ -0.23
SMAD3-207ENST00000558763 ATP2C2O75185 946 aa13.6□□□□□ -0.23
SMAD3-207ENST00000558763 ZNF143P52747 638 aaPredicted RBP13.6□□□□□ -0.23
SMAD3-207ENST00000558763 DRG2P55039 364 aaKnown RBP13.6□□□□□ -0.23
SMAD3-207ENST00000558763 WDR5P61964 334 aaKnown RBP13.6□□□□□ -0.23
SMAD3-207ENST00000558763 TAZQ16635 292 aa13.6□□□□□ -0.23
SMAD3-207ENST00000558763 UPP1Q16831 310 aa13.6□□□□□ -0.23
SMAD3-207ENST00000558763 FAM117BQ6P1L5 589 aa13.6□□□□□ -0.23
SMAD3-207ENST00000558763 GLB1LQ6UWU2 654 aa13.6□□□□□ -0.23
SMAD3-207ENST00000558763 ZDHHC24Q6UX98 284 aa13.6□□□□□ -0.23
SMAD3-207ENST00000558763 PAQR9Q6ZVX9 377 aa13.6□□□□□ -0.23
SMAD3-207ENST00000558763 FUKQ8N0W3 1084 aa13.6□□□□□ -0.23
SMAD3-207ENST00000558763 B3GALNT2Q8NCR0 500 aa13.6□□□□□ -0.23
SMAD3-207ENST00000558763 RNF25Q96BH1 459 aaPredicted RBP13.6□□□□□ -0.23
SMAD3-207ENST00000558763 PEBP4Q96S96 227 aa13.6□□□□□ -0.23
SMAD3-207ENST00000558763 DPH5Q9H2P9 285 aa13.6□□□□□ -0.23
SMAD3-207ENST00000558763 ELAC1Q9H777 363 aaKnown RBP13.6□□□□□ -0.23
SMAD3-207ENST00000558763 UBN1Q9NPG3 1134 aa13.6□□□□□ -0.23
SMAD3-207ENST00000558763 NEU2Q9Y3R4 380 aa13.6□□□□□ -0.23
SMAD3-207ENST00000558763 PTPRDP23468 1912 aa13.6□□□□□ -0.23
SMAD3-207ENST00000558763 SYF2O95926 243 aaKnown RBP13.6□□□□□ -0.23
SMAD3-207ENST00000558763 FGBP02675 491 aa13.6□□□□□ -0.23
SMAD3-207ENST00000558763 KRT1P04264 644 aa13.6□□□□□ -0.23
SMAD3-207ENST00000558763 FAM163BP0C2L3 166 aa13.6□□□□□ -0.23
SMAD3-207ENST00000558763 OAS2P29728 719 aaKnown RBP13.6□□□□□ -0.23
SMAD3-207ENST00000558763 HSPA9P38646 679 aaKnown RBP13.6□□□□□ -0.23
SMAD3-207ENST00000558763 CDKN2BP42772 138 aa13.6□□□□□ -0.23
SMAD3-207ENST00000558763 BCAT1P54687 386 aa13.6□□□□□ -0.23
SMAD3-207ENST00000558763 BST2Q10589 180 aaKnown RBP13.6□□□□□ -0.23
SMAD3-207ENST00000558763 SH3PXD2AQ5TCZ1 1133 aa13.6□□□□□ -0.23
SMAD3-207ENST00000558763 SPOCD1Q6ZMY3 1216 aa13.6□□□□□ -0.23
SMAD3-207ENST00000558763 NPAS4Q8IUM7 802 aa13.6□□□□□ -0.23
SMAD3-207ENST00000558763 CCDC50Q8IVM0 306 aa13.6□□□□□ -0.23
SMAD3-207ENST00000558763 RCOR2Q8IZ40 523 aa13.6□□□□□ -0.23
SMAD3-207ENST00000558763 ABI1Q8IZP0 508 aa13.6□□□□□ -0.23
SMAD3-207ENST00000558763 SLC2A14Q8TDB8 520 aa13.6□□□□□ -0.23
SMAD3-207ENST00000558763 PIK3R5Q8WYR1 880 aa13.6□□□□□ -0.23
SMAD3-207ENST00000558763 RBM41Q96IZ5 413 aaKnown RBP13.6□□□□□ -0.23
SMAD3-207ENST00000558763 SENP8Q96LD8 212 aa13.6□□□□□ -0.23
SMAD3-207ENST00000558763 B3GNT5Q9BYG0 378 aa13.6□□□□□ -0.23
SMAD3-207ENST00000558763 RAB17Q9H0T7 212 aa13.6□□□□□ -0.23
SMAD3-207ENST00000558763 SNX25Q9H3E2 840 aa13.6□□□□□ -0.23
SMAD3-207ENST00000558763 UTP11Q9Y3A2 253 aaKnown RBP13.6□□□□□ -0.23
SMAD3-207ENST00000558763 hCG_1818297A0A087WSY0 165 aa13.59□□□□□ -0.23
SMAD3-207ENST00000558763 CASTOR2A6NHX0 329 aa13.59□□□□□ -0.23
SMAD3-207ENST00000558763 DPYSL4O14531 572 aa13.59□□□□□ -0.23
SMAD3-207ENST00000558763 BAIAP3O94812 1187 aa13.59□□□□□ -0.23
SMAD3-207ENST00000558763 AMHP03971 560 aa13.59□□□□□ -0.23
SMAD3-207ENST00000558763 KRT10P13645 584 aa13.59□□□□□ -0.23
SMAD3-207ENST00000558763 ACAT1P24752 427 aaKnown RBP13.59□□□□□ -0.23
SMAD3-207ENST00000558763 ADORA2BP29275 332 aa13.59□□□□□ -0.23
SMAD3-207ENST00000558763 MIPP30301 263 aa13.59□□□□□ -0.23
SMAD3-207ENST00000558763 SSR1P43307 286 aaKnown RBP13.59□□□□□ -0.23
SMAD3-207ENST00000558763 RPL21P46778 160 aaKnown RBP13.59□□□□□ -0.23
SMAD3-207ENST00000558763 OR6B2Q6IFH4 312 aa13.59□□□□□ -0.23
SMAD3-207ENST00000558763 PSRC1Q6PGN9 363 aaPredicted RBP13.59□□□□□ -0.23
SMAD3-207ENST00000558763 FAM43BQ6ZT52 329 aaPredicted RBP13.59□□□□□ -0.23
SMAD3-207ENST00000558763 CRIPAKQ8N1N5 446 aa13.59□□□□□ -0.23
SMAD3-207ENST00000558763 ADAM33Q9BZ11 813 aa13.59□□□□□ -0.23
SMAD3-207ENST00000558763 TXLNGYQ9BZA5 131 aa13.59□□□□□ -0.23
SMAD3-207ENST00000558763 TRIM31Q9BZY9 425 aa13.59□□□□□ -0.23
SMAD3-207ENST00000558763 CRTAC1Q9NQ79 661 aa13.59□□□□□ -0.23
SMAD3-207ENST00000558763 FAM114A2Q9NRY5 505 aa13.59□□□□□ -0.23
SMAD3-207ENST00000558763 HESX1Q9UBX0 185 aa13.59□□□□□ -0.23
SMAD3-207ENST00000558763 NR2E3Q9Y5X4 410 aa13.59□□□□□ -0.23
SMAD3-207ENST00000558763 NLRC5Q86WI3 1866 aa13.59□□□□□ -0.23
SMAD3-207ENST00000558763 B4GALT3O60512 393 aa13.58□□□□□ -0.24
SMAD3-207ENST00000558763 EFCAB14O75071 495 aa13.58□□□□□ -0.24
SMAD3-207ENST00000558763 GRAP2O75791 330 aa13.58□□□□□ -0.24
SMAD3-207ENST00000558763 COPS2P61201 443 aa13.58□□□□□ -0.24
SMAD3-207ENST00000558763 SLC6A3Q01959 620 aa13.58□□□□□ -0.24
SMAD3-207ENST00000558763 HLTFQ14527 1009 aaKnown RBP eCLIP13.58□□□□□ -0.24
SMAD3-207ENST00000558763 ACAP1Q15027 740 aa13.58□□□□□ -0.24
SMAD3-207ENST00000558763 UAP1Q16222 522 aaPredicted RBP13.58□□□□□ -0.24
SMAD3-207ENST00000558763 SMTNL2Q2TAL5 461 aa13.58□□□□□ -0.24
SMAD3-207ENST00000558763 NOMO2Q5JPE7 1267 aa13.58□□□□□ -0.24
SMAD3-207ENST00000558763 TMEM240Q5SV17 173 aa13.58□□□□□ -0.24
SMAD3-207ENST00000558763 SCUBE3Q8IX30 993 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms