RNA–Protein interactions for RNA: ENST00000558072.5

TPM1-209, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-209ENST00000558072 C3orf20Q8ND61 904 aa13.07□□□□□ -0.32
TPM1-209ENST00000558072 ACRBPQ8NEB7 543 aa13.07□□□□□ -0.32
TPM1-209ENST00000558072 FEZF2Q8TBJ5 459 aa13.07□□□□□ -0.32
TPM1-209ENST00000558072 IRGQQ8WZA9 623 aa13.07□□□□□ -0.32
TPM1-209ENST00000558072 DESI2Q9BSY9 194 aa13.07□□□□□ -0.32
TPM1-209ENST00000558072 SELENOOQ9BVL4 669 aa13.07□□□□□ -0.32
TPM1-209ENST00000558072 PLEKHA4Q9H4M7 779 aa13.07□□□□□ -0.32
TPM1-209ENST00000558072 ZNF576Q9H609 170 aa13.07□□□□□ -0.32
TPM1-209ENST00000558072 ASNSD1Q9NWL6 643 aa13.07□□□□□ -0.32
TPM1-209ENST00000558072 LMCD1Q9NZU5 365 aa13.07□□□□□ -0.32
TPM1-209ENST00000558072 CNOT8Q9UFF9 292 aaKnown RBP13.07□□□□□ -0.32
TPM1-209ENST00000558072 ASB3Q9Y575 518 aa13.07□□□□□ -0.32
TPM1-209ENST00000558072 TRIOBPQ9H2D6 2365 aa13.06□□□□□ -0.32
TPM1-209ENST00000558072 HIDE1A8MVS5 230 aa13.06□□□□□ -0.32
TPM1-209ENST00000558072 PRRG1O14668 218 aa13.06□□□□□ -0.32
TPM1-209ENST00000558072 FSCN2O14926 492 aa13.06□□□□□ -0.32
TPM1-209ENST00000558072 ZNF263O14978 683 aa13.06□□□□□ -0.32
TPM1-209ENST00000558072 TEX28O15482 410 aa13.06□□□□□ -0.32
TPM1-209ENST00000558072 GLUD1P00367 558 aa13.06□□□□□ -0.32
TPM1-209ENST00000558072 CYP1A2P05177 515 aa13.06□□□□□ -0.32
TPM1-209ENST00000558072 SRGAP2BP0DMP2 458 aa13.06□□□□□ -0.32
TPM1-209ENST00000558072 ABCB4P21439 1286 aa13.06□□□□□ -0.32
TPM1-209ENST00000558072 NOP2P46087 812 aaKnown RBP13.06□□□□□ -0.32
TPM1-209ENST00000558072 PPP3CCP48454 512 aa13.06□□□□□ -0.32
TPM1-209ENST00000558072 PSEN1P49768 467 aa13.06□□□□□ -0.32
TPM1-209ENST00000558072 EPHB3P54753 998 aa13.06□□□□□ -0.32
TPM1-209ENST00000558072 RBM10P98175 930 aaKnown RBP13.06□□□□□ -0.32
TPM1-209ENST00000558072 ADCY1Q08828 1119 aa13.06□□□□□ -0.32
TPM1-209ENST00000558072 GRIN2CQ14957 1233 aa13.06□□□□□ -0.32
TPM1-209ENST00000558072 DNAJC24Q6P3W2 148 aa13.06□□□□□ -0.32
TPM1-209ENST00000558072 DCUN1D2Q6PH85 259 aa13.06□□□□□ -0.32
TPM1-209ENST00000558072 MMS22LQ6ZRQ5 1243 aa13.06□□□□□ -0.32
TPM1-209ENST00000558072 PIGZQ86VD9 579 aa13.06□□□□□ -0.32
TPM1-209ENST00000558072 TCEAL8Q8IYN2 117 aa13.06□□□□□ -0.32
TPM1-209ENST00000558072 NUP93Q8N1F7 819 aa13.06□□□□□ -0.32
TPM1-209ENST00000558072 ELMOD1Q8N336 334 aa13.06□□□□□ -0.32
TPM1-209ENST00000558072 WDTC1Q8N5D0 677 aa13.06□□□□□ -0.32
TPM1-209ENST00000558072 KLHL5Q96PQ7 755 aa13.06□□□□□ -0.32
TPM1-209ENST00000558072 C11orf70Q9BRQ4 267 aa13.06□□□□□ -0.32
TPM1-209ENST00000558072 RHOBTB2Q9BYZ6 727 aa13.06□□□□□ -0.32
TPM1-209ENST00000558072 TMLHEQ9NVH6 421 aa13.06□□□□□ -0.32
TPM1-209ENST00000558072 RRN3Q9NYV6 651 aa13.06□□□□□ -0.32
TPM1-209ENST00000558072 CTTNBP2NLQ9P2B4 639 aa13.06□□□□□ -0.32
TPM1-209ENST00000558072 UXTQ9UBK9 157 aaPredicted RBP13.06□□□□□ -0.32
TPM1-209ENST00000558072 PYCARDQ9ULZ3 195 aa13.06□□□□□ -0.32
TPM1-209ENST00000558072 CHD7Q9P2D1 2997 aa13.05□□□□□ -0.32
TPM1-209ENST00000558072 WDR27A2RRH5 827 aa13.05□□□□□ -0.32
TPM1-209ENST00000558072 C2orf71A6NGG8 1288 aa13.05□□□□□ -0.32
TPM1-209ENST00000558072 SIGLEC16A6NMB1 481 aa13.05□□□□□ -0.32
TPM1-209ENST00000558072 CLDN5O00501 218 aa13.05□□□□□ -0.32
TPM1-209ENST00000558072 MTA2O94776 668 aa13.05□□□□□ -0.32
TPM1-209ENST00000558072 CNPP09543 421 aaKnown RBP13.05□□□□□ -0.32
TPM1-209ENST00000558072 CSH1P0DML2 217 aa13.05□□□□□ -0.32
TPM1-209ENST00000558072 CSH2P0DML3 217 aa13.05□□□□□ -0.32
TPM1-209ENST00000558072 KRT3P12035 628 aa13.05□□□□□ -0.32
TPM1-209ENST00000558072 GTF2F1P35269 517 aaKnown RBP eCLIP13.05□□□□□ -0.32
TPM1-209ENST00000558072 ACAP1Q15027 740 aa13.05□□□□□ -0.32
TPM1-209ENST00000558072 TAF12Q16514 161 aa13.05□□□□□ -0.32
TPM1-209ENST00000558072 PTPN20Q4JDL3 420 aa13.05□□□□□ -0.32
TPM1-209ENST00000558072 RAB41Q5JT25 222 aa13.05□□□□□ -0.32
TPM1-209ENST00000558072 HABP4Q5JVS0 413 aaKnown RBP13.05□□□□□ -0.32
TPM1-209ENST00000558072 OR6B2Q6IFH4 312 aa13.05□□□□□ -0.32
TPM1-209ENST00000558072 PLEKHA7Q6IQ23 1121 aa13.05□□□□□ -0.32
TPM1-209ENST00000558072 PMF1Q6P1K2 205 aa13.05□□□□□ -0.32
TPM1-209ENST00000558072 RNF19BQ6ZMZ0 732 aa13.05□□□□□ -0.32
TPM1-209ENST00000558072 BEND5Q7L4P6 421 aa13.05□□□□□ -0.32
TPM1-209ENST00000558072 SCN4BQ8IWT1 228 aa13.05□□□□□ -0.32
TPM1-209ENST00000558072 TTC9BQ8N6N2 239 aa13.05□□□□□ -0.32
TPM1-209ENST00000558072 STKLD1Q8NE28 680 aa13.05□□□□□ -0.32
TPM1-209ENST00000558072 PDZD8Q8NEN9 1154 aa13.05□□□□□ -0.32
TPM1-209ENST00000558072 TRIM58Q8NG06 486 aa13.05□□□□□ -0.32
TPM1-209ENST00000558072 OVCA2Q8WZ82 227 aa13.05□□□□□ -0.32
TPM1-209ENST00000558072 CPXM1Q96SM3 734 aa13.05□□□□□ -0.32
TPM1-209ENST00000558072 CDK5RAP1Q96SZ6 601 aaKnown RBP13.05□□□□□ -0.32
TPM1-209ENST00000558072 SEPT5Q99719 369 aaPredicted RBP13.05□□□□□ -0.32
TPM1-209ENST00000558072 SMOQ99835 787 aa13.05□□□□□ -0.32
TPM1-209ENST00000558072 THAP2Q9H0W7 228 aa13.05□□□□□ -0.32
TPM1-209ENST00000558072 CYP4F11Q9HBI6 524 aa13.05□□□□□ -0.32
TPM1-209ENST00000558072 TAS2R14Q9NYV8 317 aa13.05□□□□□ -0.32
TPM1-209ENST00000558072 REXO2Q9Y3B8 237 aaKnown RBP13.05□□□□□ -0.32
TPM1-209ENST00000558072 NCANO14594 1321 aa13.05□□□□□ -0.32
TPM1-209ENST00000558072 E5RJQ4 531 aa13.04□□□□□ -0.32
TPM1-209ENST00000558072 F8VP50 259 aa13.04□□□□□ -0.32
TPM1-209ENST00000558072 MYO1FO00160 1098 aa13.04□□□□□ -0.32
TPM1-209ENST00000558072 HSF2BPO75031 334 aa13.04□□□□□ -0.32
TPM1-209ENST00000558072 FGF19O95750 216 aa13.04□□□□□ -0.32
TPM1-209ENST00000558072 ZBED1O96006 694 aa13.04□□□□□ -0.32
TPM1-209ENST00000558072 ERBB2P04626 1255 aa13.04□□□□□ -0.32
TPM1-209ENST00000558072 CFHP08603 1231 aa13.04□□□□□ -0.32
TPM1-209ENST00000558072 CYP2F1P24903 491 aa13.04□□□□□ -0.32
TPM1-209ENST00000558072 SLC1A1P43005 524 aa13.04□□□□□ -0.32
TPM1-209ENST00000558072 SLC6A3Q01959 620 aa13.04□□□□□ -0.32
TPM1-209ENST00000558072 DUSP4Q13115 394 aa13.04□□□□□ -0.32
TPM1-209ENST00000558072 ADGRE1Q14246 886 aa13.04□□□□□ -0.32
TPM1-209ENST00000558072 DENND5BQ6ZUT9 1274 aa13.04□□□□□ -0.32
TPM1-209ENST00000558072 SLC26A9Q7LBE3 791 aa13.04□□□□□ -0.32
TPM1-209ENST00000558072 TADA2BQ86TJ2 420 aa13.04□□□□□ -0.32
TPM1-209ENST00000558072 PALB2Q86YC2 1186 aa13.04□□□□□ -0.32
TPM1-209ENST00000558072 ATAD1Q8NBU5 361 aa13.04□□□□□ -0.32
TPM1-209ENST00000558072 OLIG1Q8TAK6 271 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 112.7 ms