RNA–Protein interactions for RNA: ENST00000558059.5

SNRPA1-206, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 678 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-206ENST00000558059 TNFRSF10BO14763 440 aa9.33□□□□□ -0.92
SNRPA1-206ENST00000558059 NCAM2O15394 837 aa9.33□□□□□ -0.92
SNRPA1-206ENST00000558059 CLSTN1O94985 981 aa9.33□□□□□ -0.92
SNRPA1-206ENST00000558059 SP9P0CG40 484 aa9.33□□□□□ -0.92
SNRPA1-206ENST00000558059 EPB41P11171 864 aaKnown RBP9.33□□□□□ -0.92
SNRPA1-206ENST00000558059 CHRNB1P11230 501 aa9.33□□□□□ -0.92
SNRPA1-206ENST00000558059 BMP6P22004 513 aa9.33□□□□□ -0.92
SNRPA1-206ENST00000558059 ANXA13P27216 316 aa9.33□□□□□ -0.92
SNRPA1-206ENST00000558059 CTHP32929 405 aa9.33□□□□□ -0.92
SNRPA1-206ENST00000558059 KPNA1P52294 538 aaPredicted RBP9.33□□□□□ -0.92
SNRPA1-206ENST00000558059 NDST1P52848 882 aa9.33□□□□□ -0.92
SNRPA1-206ENST00000558059 FKBP3Q00688 224 aaKnown RBP9.33□□□□□ -0.92
SNRPA1-206ENST00000558059 PLCB2Q00722 1185 aa9.33□□□□□ -0.92
SNRPA1-206ENST00000558059 INCA1Q0VD86 236 aa9.33□□□□□ -0.92
SNRPA1-206ENST00000558059 ORC1Q13415 861 aa9.33□□□□□ -0.92
SNRPA1-206ENST00000558059 WDR44Q5JSH3 913 aa9.33□□□□□ -0.92
SNRPA1-206ENST00000558059 KRT39Q6A163 491 aa9.33□□□□□ -0.92
SNRPA1-206ENST00000558059 ISM2Q6H9L7 571 aa9.33□□□□□ -0.92
SNRPA1-206ENST00000558059 FRMD5Q7Z6J6 570 aa9.33□□□□□ -0.92
SNRPA1-206ENST00000558059 FAM35AQ86V20 835 aa9.33□□□□□ -0.92
SNRPA1-206ENST00000558059 UNC93AQ86WB7 457 aa9.33□□□□□ -0.92
SNRPA1-206ENST00000558059 ARL14EPQ8N8R7 260 aaPredicted RBP9.33□□□□□ -0.92
SNRPA1-206ENST00000558059 TTC8Q8TAM2 541 aa9.33□□□□□ -0.92
SNRPA1-206ENST00000558059 WHAMMQ8TF30 809 aa9.33□□□□□ -0.92
SNRPA1-206ENST00000558059 PTCD2Q8WV60 388 aaKnown RBP9.33□□□□□ -0.92
SNRPA1-206ENST00000558059 MSANTD3Q96H12 275 aa9.33□□□□□ -0.92
SNRPA1-206ENST00000558059 TNIP3Q96KP6 325 aa9.33□□□□□ -0.92
SNRPA1-206ENST00000558059 TWNKQ96RR1 684 aa9.33□□□□□ -0.92
SNRPA1-206ENST00000558059 KCNK16Q96T55 309 aa9.33□□□□□ -0.92
SNRPA1-206ENST00000558059 GTPBP4Q9BZE4 634 aaKnown RBP9.33□□□□□ -0.92
SNRPA1-206ENST00000558059 MMRN2Q9H8L6 949 aa9.33□□□□□ -0.92
SNRPA1-206ENST00000558059 KIF9Q9HAQ2 790 aa9.33□□□□□ -0.92
SNRPA1-206ENST00000558059 LMAN1LQ9HAT1 526 aa9.33□□□□□ -0.92
SNRPA1-206ENST00000558059 CYP3A43Q9HB55 503 aa9.33□□□□□ -0.92
SNRPA1-206ENST00000558059 TRPC7Q9HCX4 862 aa9.33□□□□□ -0.92
SNRPA1-206ENST00000558059 HPS4Q9NQG7 708 aa9.33□□□□□ -0.92
SNRPA1-206ENST00000558059 THG1LQ9NWX6 298 aaKnown RBP9.33□□□□□ -0.92
SNRPA1-206ENST00000558059 IL37Q9NZH6 218 aa9.33□□□□□ -0.92
SNRPA1-206ENST00000558059 TRPM5Q9NZQ8 1165 aa9.33□□□□□ -0.92
SNRPA1-206ENST00000558059 HOOK1Q9UJC3 728 aaKnown RBP9.33□□□□□ -0.92
SNRPA1-206ENST00000558059 SDK1Q7Z5N4 2213 aa9.33□□□□□ -0.92
SNRPA1-206ENST00000558059 OTOL1A6NHN0 477 aaPredicted RBP9.32□□□□□ -0.92
SNRPA1-206ENST00000558059 PPP1R3GB7ZBB8 358 aa9.32□□□□□ -0.92
SNRPA1-206ENST00000558059 SLC16A3O15427 465 aaKnown RBP9.32□□□□□ -0.92
SNRPA1-206ENST00000558059 KINO60870 393 aaKnown RBP9.32□□□□□ -0.92
SNRPA1-206ENST00000558059 BEST1O76090 585 aa9.32□□□□□ -0.92
SNRPA1-206ENST00000558059 USP17L7P0C7H9 530 aa9.32□□□□□ -0.92
SNRPA1-206ENST00000558059 CCDC130P13994 396 aa9.32□□□□□ -0.92
SNRPA1-206ENST00000558059 TCF3P15923 654 aa9.32□□□□□ -0.92
SNRPA1-206ENST00000558059 PFKLP17858 780 aa9.32□□□□□ -0.92
SNRPA1-206ENST00000558059 HDCP19113 662 aa9.32□□□□□ -0.92
SNRPA1-206ENST00000558059 MXI1P50539 228 aa9.32□□□□□ -0.92
SNRPA1-206ENST00000558059 ZXDBP98169 803 aa9.32□□□□□ -0.92
SNRPA1-206ENST00000558059 LRRC63Q05C16 580 aa9.32□□□□□ -0.92
SNRPA1-206ENST00000558059 TAF10Q12962 218 aa9.32□□□□□ -0.92
SNRPA1-206ENST00000558059 USP4Q13107 963 aa9.32□□□□□ -0.92
SNRPA1-206ENST00000558059 RUNX3Q13761 415 aa9.32□□□□□ -0.92
SNRPA1-206ENST00000558059 GAS6Q14393 721 aa9.32□□□□□ -0.92
SNRPA1-206ENST00000558059 ZNF77Q15935 545 aa9.32□□□□□ -0.92
SNRPA1-206ENST00000558059 ITPRIPL2Q3MIP1 535 aa9.32□□□□□ -0.92
SNRPA1-206ENST00000558059 DMRTA1Q5VZB9 504 aa9.32□□□□□ -0.92
SNRPA1-206ENST00000558059 TRIM68Q6AZZ1 485 aa9.32□□□□□ -0.92
SNRPA1-206ENST00000558059 C1orf228Q6PIY5 440 aa9.32□□□□□ -0.92
SNRPA1-206ENST00000558059 ASCL5Q7RTU5 278 aa9.32□□□□□ -0.92
SNRPA1-206ENST00000558059 RALGPS2Q86X27 583 aaPredicted RBP9.32□□□□□ -0.92
SNRPA1-206ENST00000558059 NUP93Q8N1F7 819 aa9.32□□□□□ -0.92
SNRPA1-206ENST00000558059 C12orf29Q8N999 325 aa9.32□□□□□ -0.92
SNRPA1-206ENST00000558059 ZMIZ2Q8NF64 920 aa9.32□□□□□ -0.92
SNRPA1-206ENST00000558059 CHFRQ96EP1 664 aa9.32□□□□□ -0.92
SNRPA1-206ENST00000558059 SMARCD1Q96GM5 515 aa9.32□□□□□ -0.92
SNRPA1-206ENST00000558059 DHTKD1Q96HY7 919 aaPredicted RBP9.32□□□□□ -0.92
SNRPA1-206ENST00000558059 TSG101Q99816 390 aa9.32□□□□□ -0.92
SNRPA1-206ENST00000558059 SMOQ99835 787 aa9.32□□□□□ -0.92
SNRPA1-206ENST00000558059 DUSP9Q99956 384 aaKnown RBP9.32□□□□□ -0.92
SNRPA1-206ENST00000558059 MED10Q9BTT4 135 aa9.32□□□□□ -0.92
SNRPA1-206ENST00000558059 IMPG2Q9BZV3 1241 aa9.32□□□□□ -0.92
SNRPA1-206ENST00000558059 NIF3L1Q9GZT8 377 aa9.32□□□□□ -0.92
SNRPA1-206ENST00000558059 RNF38Q9H0F5 515 aa9.32□□□□□ -0.92
SNRPA1-206ENST00000558059 CHRDQ9H2X0 955 aa9.32□□□□□ -0.92
SNRPA1-206ENST00000558059 EBF3Q9H4W6 596 aa9.32□□□□□ -0.92
SNRPA1-206ENST00000558059 SPATA6Q9NWH7 488 aaPredicted RBP9.32□□□□□ -0.92
SNRPA1-206ENST00000558059 EHD2Q9NZN4 543 aa9.32□□□□□ -0.92
SNRPA1-206ENST00000558059 ARHGAP26Q9UNA1 814 aa9.32□□□□□ -0.92
SNRPA1-206ENST00000558059 ATP8B3O60423 1300 aa9.31□□□□□ -0.92
SNRPA1-206ENST00000558059 FAM92AA1XBS5 289 aa9.31□□□□□ -0.92
SNRPA1-206ENST00000558059 PSMA7O14818 248 aa9.31□□□□□ -0.92
SNRPA1-206ENST00000558059 LAMTOR5O43504 91 aa9.31□□□□□ -0.92
SNRPA1-206ENST00000558059 STX10O60499 249 aa9.31□□□□□ -0.92
SNRPA1-206ENST00000558059 GFRA3O60609 400 aa9.31□□□□□ -0.92
SNRPA1-206ENST00000558059 CILPO75339 1184 aa9.31□□□□□ -0.92
SNRPA1-206ENST00000558059 AP1G2O75843 785 aa9.31□□□□□ -0.92
SNRPA1-206ENST00000558059 RTN3O95197 1032 aaPredicted RBP9.31□□□□□ -0.92
SNRPA1-206ENST00000558059 OLFM2O95897 454 aa9.31□□□□□ -0.92
SNRPA1-206ENST00000558059 OAS1P00973 400 aaKnown RBP9.31□□□□□ -0.92
SNRPA1-206ENST00000558059 CKMP06732 381 aa9.31□□□□□ -0.92
SNRPA1-206ENST00000558059 ARSAP15289 507 aa9.31□□□□□ -0.92
SNRPA1-206ENST00000558059 YWHAQP27348 245 aa9.31□□□□□ -0.92
SNRPA1-206ENST00000558059 PPP3CCP48454 512 aa9.31□□□□□ -0.92
SNRPA1-206ENST00000558059 SLC7A9P82251 487 aa9.31□□□□□ -0.92
SNRPA1-206ENST00000558059 MTAPQ13126 283 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms