RNA–Protein interactions for RNA: ENST00000557866.1

SPG11-204, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 2

Gene SPG11, Length 468 nt, Biotype non stop decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-204ENST00000557866 CCDC181Q5TID7 509 aa7.8□□□□□ -1.16
SPG11-204ENST00000557866 LIN9Q5TKA1 542 aa7.8□□□□□ -1.16
SPG11-204ENST00000557866 AADACL2Q6P093 401 aa7.8□□□□□ -1.16
SPG11-204ENST00000557866 RTN4RL1Q86UN2 441 aaPredicted RBP7.8□□□□□ -1.16
SPG11-204ENST00000557866 ALYREFQ86V81 257 aaKnown RBP7.8□□□□□ -1.16
SPG11-204ENST00000557866 OSTM1Q86WC4 334 aa7.8□□□□□ -1.16
SPG11-204ENST00000557866 C12orf29Q8N999 325 aa7.8□□□□□ -1.16
SPG11-204ENST00000557866 USP38Q8NB14 1042 aa7.8□□□□□ -1.16
SPG11-204ENST00000557866 UBA3Q8TBC4 463 aa7.8□□□□□ -1.16
SPG11-204ENST00000557866 FEZF2Q8TBJ5 459 aa7.8□□□□□ -1.16
SPG11-204ENST00000557866 ACTRT1Q8TDG2 376 aa7.8□□□□□ -1.16
SPG11-204ENST00000557866 HDAC7Q8WUI4 952 aa7.8□□□□□ -1.16
SPG11-204ENST00000557866 KBTBD7Q8WVZ9 684 aa7.8□□□□□ -1.16
SPG11-204ENST00000557866 HEXIM2Q96MH2 286 aaKnown RBP7.8□□□□□ -1.16
SPG11-204ENST00000557866 GLT1D1Q96MS3 346 aa7.8□□□□□ -1.16
SPG11-204ENST00000557866 TRAIPQ9BWF2 469 aa7.8□□□□□ -1.16
SPG11-204ENST00000557866 WNT8AQ9H1J5 351 aa7.8□□□□□ -1.16
SPG11-204ENST00000557866 DPEP3Q9H4B8 488 aa7.8□□□□□ -1.16
SPG11-204ENST00000557866 FAM124BQ9H5Z6 455 aaPredicted RBP7.8□□□□□ -1.16
SPG11-204ENST00000557866 ZNF446Q9NWS9 450 aa7.8□□□□□ -1.16
SPG11-204ENST00000557866 GDAP2Q9NXN4 497 aa7.8□□□□□ -1.16
SPG11-204ENST00000557866 TTC7AQ9ULT0 858 aaPredicted RBP7.8□□□□□ -1.16
SPG11-204ENST00000557866 GIT1Q9Y2X7 761 aa7.8□□□□□ -1.16
SPG11-204ENST00000557866 NR2E1Q9Y466 385 aa7.8□□□□□ -1.16
SPG11-204ENST00000557866 ANK1P16157 1881 aa7.8□□□□□ -1.16
SPG11-204ENST00000557866 BRCA2P51587 3418 aa7.79□□□□□ -1.16
SPG11-204ENST00000557866 A0A0U1RQF3 1178 aa7.79□□□□□ -1.16
SPG11-204ENST00000557866 A0A0U1RQG5 324 aaPredicted RBP7.79□□□□□ -1.16
SPG11-204ENST00000557866 TMEM191CA6NGB0 347 aa7.79□□□□□ -1.16
SPG11-204ENST00000557866 ARL5CA6NH57 179 aa7.79□□□□□ -1.16
SPG11-204ENST00000557866 KPNA7A9QM74 516 aa7.79□□□□□ -1.16
SPG11-204ENST00000557866 EFSO43281 561 aa7.79□□□□□ -1.16
SPG11-204ENST00000557866 XPOTO43592 962 aaKnown RBP7.79□□□□□ -1.16
SPG11-204ENST00000557866 CAND2O75155 1236 aa7.79□□□□□ -1.16
SPG11-204ENST00000557866 PROSCO94903 275 aa7.79□□□□□ -1.16
SPG11-204ENST00000557866 ERBB2P04626 1255 aa7.79□□□□□ -1.16
SPG11-204ENST00000557866 CALB1P05937 261 aa7.79□□□□□ -1.16
SPG11-204ENST00000557866 PYGMP11217 842 aa7.79□□□□□ -1.16
SPG11-204ENST00000557866 LMO2P25791 158 aa7.79□□□□□ -1.16
SPG11-204ENST00000557866 CTNNA1P35221 906 aaKnown RBP7.79□□□□□ -1.16
SPG11-204ENST00000557866 GPD2P43304 727 aa7.79□□□□□ -1.16
SPG11-204ENST00000557866 TAF6P49848 677 aa7.79□□□□□ -1.16
SPG11-204ENST00000557866 SCNN1GP51170 649 aa7.79□□□□□ -1.16
SPG11-204ENST00000557866 TAS2R40P59535 323 aa7.79□□□□□ -1.16
SPG11-204ENST00000557866 LILRA4P59901 499 aa7.79□□□□□ -1.16
SPG11-204ENST00000557866 RPL7AP62424 266 aaKnown RBP7.79□□□□□ -1.16
SPG11-204ENST00000557866 ZNF252P-AS1Q0IIN9 211 aa7.79□□□□□ -1.16
SPG11-204ENST00000557866 GPNMBQ14956 572 aa7.79□□□□□ -1.16
SPG11-204ENST00000557866 SGO2Q562F6 1265 aa7.79□□□□□ -1.16
SPG11-204ENST00000557866 C1orf53Q5VUE5 145 aa7.79□□□□□ -1.16
SPG11-204ENST00000557866 DAB2IPQ5VWQ8 1189 aa7.79□□□□□ -1.16
SPG11-204ENST00000557866 PPP1R2P3Q6NXS1 205 aa7.79□□□□□ -1.16
SPG11-204ENST00000557866 LCLAT1Q6UWP7 414 aa7.79□□□□□ -1.16
SPG11-204ENST00000557866 LRRC69Q6ZNQ3 347 aa7.79□□□□□ -1.16
SPG11-204ENST00000557866 ACOT1Q86TX2 421 aa7.79□□□□□ -1.16
SPG11-204ENST00000557866 TTC30AQ86WT1 665 aa7.79□□□□□ -1.16
SPG11-204ENST00000557866 ERICH1Q86X53 443 aa7.79□□□□□ -1.16
SPG11-204ENST00000557866 XYLT1Q86Y38 959 aa7.79□□□□□ -1.16
SPG11-204ENST00000557866 ZDHHC14Q8IZN3 488 aa7.79□□□□□ -1.16
SPG11-204ENST00000557866 PDCL2Q8N4E4 241 aa7.79□□□□□ -1.16
SPG11-204ENST00000557866 TTC39CQ8N584 583 aa7.79□□□□□ -1.16
SPG11-204ENST00000557866 LINC01599Q8WXQ3 324 aa7.79□□□□□ -1.16
SPG11-204ENST00000557866 ZNF560Q96MR9 790 aa7.79□□□□□ -1.16
SPG11-204ENST00000557866 CPXM1Q96SM3 734 aa7.79□□□□□ -1.16
SPG11-204ENST00000557866 ADAM2Q99965 735 aa7.79□□□□□ -1.16
SPG11-204ENST00000557866 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.79□□□□□ -1.161e-6■■■■□ 19.3
SPG11-204ENST00000557866 LRRC1Q9BTT6 524 aa7.79□□□□□ -1.16
SPG11-204ENST00000557866 SELENOOQ9BVL4 669 aa7.79□□□□□ -1.16
SPG11-204ENST00000557866 NT5C1AQ9BXI3 368 aa7.79□□□□□ -1.16
SPG11-204ENST00000557866 TSPAN10Q9H1Z9 355 aaPredicted RBP7.79□□□□□ -1.16
SPG11-204ENST00000557866 CARD9Q9H257 536 aa7.79□□□□□ -1.16
SPG11-204ENST00000557866 PAK6Q9NQU5 681 aaPredicted RBP7.79□□□□□ -1.16
SPG11-204ENST00000557866 STARD7Q9NQZ5 370 aa7.79□□□□□ -1.16
SPG11-204ENST00000557866 PARVAQ9NVD7 372 aa7.79□□□□□ -1.16
SPG11-204ENST00000557866 HCN2Q9UL51 889 aa7.79□□□□□ -1.16
SPG11-204ENST00000557866 L1RE1Q9UN81 338 aa7.79□□□□□ -1.16
SPG11-204ENST00000557866 PTPN22Q9Y2R2 807 aa7.79□□□□□ -1.16
SPG11-204ENST00000557866 PCDHA3Q9Y5H8 950 aa7.79□□□□□ -1.16
SPG11-204ENST00000557866 SQORQ9Y6N5 450 aa7.79□□□□□ -1.16
SPG11-204ENST00000557866 KAT6AQ92794 2004 aa7.79□□□□□ -1.16
SPG11-204ENST00000557866 CEP350Q5VT06 3117 aa7.78□□□□□ -1.16
SPG11-204ENST00000557866 TARSL2A2RTX5 802 aaKnown RBP7.78□□□□□ -1.16
SPG11-204ENST00000557866 MIF4GDA9UHW6 222 aaKnown RBP7.78□□□□□ -1.16
SPG11-204ENST00000557866 M0QYV0 167 aa7.78□□□□□ -1.16
SPG11-204ENST00000557866 MYO1FO00160 1098 aa7.78□□□□□ -1.16
SPG11-204ENST00000557866 PGRMC1O00264 195 aaKnown RBP7.78□□□□□ -1.16
SPG11-204ENST00000557866 TULP2O00295 520 aa7.78□□□□□ -1.16
SPG11-204ENST00000557866 SPOPO43791 374 aa7.78□□□□□ -1.16
SPG11-204ENST00000557866 SEC31AO94979 1220 aaKnown RBP7.78□□□□□ -1.16
SPG11-204ENST00000557866 ZRANB2O95218 330 aaKnown RBP eCLIP7.78□□□□□ -1.16
SPG11-204ENST00000557866 THP07101 528 aa7.78□□□□□ -1.16
SPG11-204ENST00000557866 PDGFRBP09619 1106 aa7.78□□□□□ -1.16
SPG11-204ENST00000557866 TCF4P15884 667 aa7.78□□□□□ -1.16
SPG11-204ENST00000557866 WARSP23381 471 aaKnown RBP7.78□□□□□ -1.16
SPG11-204ENST00000557866 MAN1A1P33908 653 aa7.78□□□□□ -1.16
SPG11-204ENST00000557866 GNL1P36915 607 aaPredicted RBP7.78□□□□□ -1.16
SPG11-204ENST00000557866 PNPLA4P41247 253 aa7.78□□□□□ -1.16
SPG11-204ENST00000557866 GABRB2P47870 512 aa7.78□□□□□ -1.16
SPG11-204ENST00000557866 CLCNKBP51801 687 aa7.78□□□□□ -1.16
SPG11-204ENST00000557866 GSCP56915 257 aaPredicted RBP7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms