RNA–Protein interactions for RNA: ENST00000557749.5

LINC00648-204, long intergenic non-protein coding RNA 648, humanhuman

TSL 5 BASIC

Gene LINC00648, Length 443 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00648-204ENST00000557749 C4BPAP04003 597 aaKnown RBP12.15□□□□□ -0.46
LINC00648-204ENST00000557749 USP17L7P0C7H9 530 aa12.15□□□□□ -0.46
LINC00648-204ENST00000557749 HMGA1P17096 107 aaKnown RBP12.15□□□□□ -0.46
LINC00648-204ENST00000557749 GJA1P17302 382 aa12.15□□□□□ -0.46
LINC00648-204ENST00000557749 CYP2F1P24903 491 aa12.15□□□□□ -0.46
LINC00648-204ENST00000557749 NBL1P41271 181 aa12.15□□□□□ -0.46
LINC00648-204ENST00000557749 PIK3CAP42336 1068 aa12.15□□□□□ -0.46
LINC00648-204ENST00000557749 KPNA1P52294 538 aaPredicted RBP12.15□□□□□ -0.46
LINC00648-204ENST00000557749 MYL6P60660 151 aa12.15□□□□□ -0.46
LINC00648-204ENST00000557749 NOP14P78316 857 aaKnown RBP12.15□□□□□ -0.46
LINC00648-204ENST00000557749 LRRC63Q05C16 580 aa12.15□□□□□ -0.46
LINC00648-204ENST00000557749 VAC14Q08AM6 782 aa12.15□□□□□ -0.46
LINC00648-204ENST00000557749 ADAM9Q13443 819 aa12.15□□□□□ -0.46
LINC00648-204ENST00000557749 GRM2Q14416 872 aa12.15□□□□□ -0.46
LINC00648-204ENST00000557749 ZNF528Q3MIS6 628 aa12.15□□□□□ -0.46
LINC00648-204ENST00000557749 ZNF658Q5TYW1 1059 aaPredicted RBP12.15□□□□□ -0.46
LINC00648-204ENST00000557749 TDRD10Q5VZ19 366 aaKnown RBP12.15□□□□□ -0.46
LINC00648-204ENST00000557749 DENND5BQ6ZUT9 1274 aa12.15□□□□□ -0.46
LINC00648-204ENST00000557749 MON1AQ86VX9 555 aa12.15□□□□□ -0.46
LINC00648-204ENST00000557749 UNC93AQ86WB7 457 aa12.15□□□□□ -0.46
LINC00648-204ENST00000557749 OSTM1Q86WC4 334 aa12.15□□□□□ -0.46
LINC00648-204ENST00000557749 RALGPS2Q86X27 583 aaPredicted RBP12.15□□□□□ -0.46
LINC00648-204ENST00000557749 C1orf210Q8IVY1 113 aa12.15□□□□□ -0.46
LINC00648-204ENST00000557749 FAM186BQ8IYM0 893 aa12.15□□□□□ -0.46
LINC00648-204ENST00000557749 B3GALNT2Q8NCR0 500 aa12.15□□□□□ -0.46
LINC00648-204ENST00000557749 PDZD8Q8NEN9 1154 aa12.15□□□□□ -0.46
LINC00648-204ENST00000557749 HPS1Q92902 700 aa12.15□□□□□ -0.46
LINC00648-204ENST00000557749 PCED1BQ96HM7 432 aa12.15□□□□□ -0.46
LINC00648-204ENST00000557749 C8orf48Q96LL4 319 aa12.15□□□□□ -0.46
LINC00648-204ENST00000557749 ZSWIM3Q96MP5 696 aa12.15□□□□□ -0.46
LINC00648-204ENST00000557749 SLITRK1Q96PX8 696 aa12.15□□□□□ -0.46
LINC00648-204ENST00000557749 XYLT2Q9H1B5 865 aa12.15□□□□□ -0.46
LINC00648-204ENST00000557749 GOLPH3LQ9H4A5 285 aa12.15□□□□□ -0.46
LINC00648-204ENST00000557749 TDP1Q9NUW8 608 aa12.15□□□□□ -0.46
LINC00648-204ENST00000557749 TMLHEQ9NVH6 421 aa12.15□□□□□ -0.46
LINC00648-204ENST00000557749 COMMD8Q9NX08 183 aa12.15□□□□□ -0.46
LINC00648-204ENST00000557749 FBXO4Q9UKT5 387 aa12.15□□□□□ -0.46
LINC00648-204ENST00000557749 MAGED2Q9UNF1 606 aaPredicted RBP12.15□□□□□ -0.46
LINC00648-204ENST00000557749 MAP4K5Q9Y4K4 846 aa12.15□□□□□ -0.46
LINC00648-204ENST00000557749 PIAS3Q9Y6X2 628 aa12.15□□□□□ -0.46
LINC00648-204ENST00000557749 MIA3Q5JRA6 1907 aa12.15□□□□□ -0.46
LINC00648-204ENST00000557749 PSMA7O14818 248 aa12.14□□□□□ -0.47
LINC00648-204ENST00000557749 SLC16A3O15427 465 aaKnown RBP12.14□□□□□ -0.47
LINC00648-204ENST00000557749 LAMTOR5O43504 91 aa12.14□□□□□ -0.47
LINC00648-204ENST00000557749 CST3P01034 146 aaPredicted RBP12.14□□□□□ -0.47
LINC00648-204ENST00000557749 F11P03951 625 aa12.14□□□□□ -0.47
LINC00648-204ENST00000557749 PTPN1P18031 435 aaKnown RBP12.14□□□□□ -0.47
LINC00648-204ENST00000557749 VIPR2P41587 438 aa12.14□□□□□ -0.47
LINC00648-204ENST00000557749 PSMC1P62191 440 aaKnown RBP12.14□□□□□ -0.47
LINC00648-204ENST00000557749 LAPTM4AQ15012 233 aa12.14□□□□□ -0.47
LINC00648-204ENST00000557749 PDGFRLQ15198 375 aa12.14□□□□□ -0.47
LINC00648-204ENST00000557749 DDR2Q16832 855 aa12.14□□□□□ -0.47
LINC00648-204ENST00000557749 DGKKQ5KSL6 1271 aa12.14□□□□□ -0.47
LINC00648-204ENST00000557749 CCDC26Q8TAB7 109 aa12.14□□□□□ -0.47
LINC00648-204ENST00000557749 OVCA2Q8WZ82 227 aa12.14□□□□□ -0.47
LINC00648-204ENST00000557749 FAM3CQ92520 227 aa12.14□□□□□ -0.47
LINC00648-204ENST00000557749 NKD2Q969F2 451 aaPredicted RBP12.14□□□□□ -0.47
LINC00648-204ENST00000557749 CLDN23Q96B33 292 aa12.14□□□□□ -0.47
LINC00648-204ENST00000557749 FAM126AQ9BYI3 521 aaPredicted RBP12.14□□□□□ -0.47
LINC00648-204ENST00000557749 PLA2G2FQ9BZM2 168 aa12.14□□□□□ -0.47
LINC00648-204ENST00000557749 CYP3A43Q9HB55 503 aa12.14□□□□□ -0.47
LINC00648-204ENST00000557749 HEBP1Q9NRV9 189 aa12.14□□□□□ -0.47
LINC00648-204ENST00000557749 TRPM5Q9NZQ8 1165 aa12.14□□□□□ -0.47
LINC00648-204ENST00000557749 PI15O43692 258 aa12.13□□□□□ -0.47
LINC00648-204ENST00000557749 ADH1CP00326 375 aa12.13□□□□□ -0.47
LINC00648-204ENST00000557749 ASS1P00966 412 aaKnown RBP12.13□□□□□ -0.47
LINC00648-204ENST00000557749 CKMP06732 381 aa12.13□□□□□ -0.47
LINC00648-204ENST00000557749 DCNP07585 359 aaKnown RBP12.13□□□□□ -0.47
LINC00648-204ENST00000557749 PDGFRBP09619 1106 aa12.13□□□□□ -0.47
LINC00648-204ENST00000557749 BDNFP23560 247 aa12.13□□□□□ -0.47
LINC00648-204ENST00000557749 LMO2P25791 158 aa12.13□□□□□ -0.47
LINC00648-204ENST00000557749 NRLP54845 237 aa12.13□□□□□ -0.47
LINC00648-204ENST00000557749 CYP4F8P98187 520 aa12.13□□□□□ -0.47
LINC00648-204ENST00000557749 FKBP3Q00688 224 aaKnown RBP12.13□□□□□ -0.47
LINC00648-204ENST00000557749 ITPRIPL2Q3MIP1 535 aa12.13□□□□□ -0.47
LINC00648-204ENST00000557749 MDH1BQ5I0G3 518 aa12.13□□□□□ -0.47
LINC00648-204ENST00000557749 KRT39Q6A163 491 aa12.13□□□□□ -0.47
LINC00648-204ENST00000557749 FOXR2Q6PJQ5 311 aa12.13□□□□□ -0.47
LINC00648-204ENST00000557749 SV2AQ7L0J3 742 aa12.13□□□□□ -0.47
LINC00648-204ENST00000557749 ALYREFQ86V81 257 aaKnown RBP12.13□□□□□ -0.47
LINC00648-204ENST00000557749 DDX42Q86XP3 938 aaKnown RBP eCLIP12.13□□□□□ -0.47
LINC00648-204ENST00000557749 SYNPOQ8N3V7 929 aa12.13□□□□□ -0.47
LINC00648-204ENST00000557749 MAB21L3Q8N8X9 362 aa12.13□□□□□ -0.47
LINC00648-204ENST00000557749 STKLD1Q8NE28 680 aa12.13□□□□□ -0.47
LINC00648-204ENST00000557749 SMARCD1Q96GM5 515 aa12.13□□□□□ -0.47
LINC00648-204ENST00000557749 MRPL45Q9BRJ2 306 aaKnown RBP12.13□□□□□ -0.47
LINC00648-204ENST00000557749 TTLL2Q9BWV7 592 aa12.13□□□□□ -0.47
LINC00648-204ENST00000557749 KLF16Q9BXK1 252 aaPredicted RBP12.13□□□□□ -0.47
LINC00648-204ENST00000557749 FOXQ1Q9C009 403 aa12.13□□□□□ -0.47
LINC00648-204ENST00000557749 TMEM8AQ9HCN3 771 aa12.13□□□□□ -0.47
LINC00648-204ENST00000557749 DMAP1Q9NPF5 467 aaPredicted RBP12.13□□□□□ -0.47
LINC00648-204ENST00000557749 CRTAC1Q9NQ79 661 aa12.13□□□□□ -0.47
LINC00648-204ENST00000557749 SPATA6Q9NWH7 488 aaPredicted RBP12.13□□□□□ -0.47
LINC00648-204ENST00000557749 DLGAP2Q9P1A6 1054 aa12.13□□□□□ -0.47
LINC00648-204ENST00000557749 NCANO14594 1321 aa12.12□□□□□ -0.47
LINC00648-204ENST00000557749 BICDL2A1A5D9 508 aa12.12□□□□□ -0.47
LINC00648-204ENST00000557749 FAM187AA6NFU0 413 aa12.12□□□□□ -0.47
LINC00648-204ENST00000557749 ARNTLO00327 626 aa12.12□□□□□ -0.47
LINC00648-204ENST00000557749 AKAP3O75969 853 aa12.12□□□□□ -0.47
LINC00648-204ENST00000557749 AVPP01185 164 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms