RNA–Protein interactions for RNA: ENST00000557498.1

ARHGEF40-208, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 2

Gene ARHGEF40, Length 794 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-208ENST00000557498 PSMA2P25787 234 aa15.21■□□□□ 0.03
ARHGEF40-208ENST00000557498 CTNNA1P35221 906 aaKnown RBP15.21■□□□□ 0.03
ARHGEF40-208ENST00000557498 GLUD2P49448 558 aa15.21■□□□□ 0.03
ARHGEF40-208ENST00000557498 TKTL1P51854 596 aa15.21■□□□□ 0.03
ARHGEF40-208ENST00000557498 RABGGTBP53611 331 aa15.21■□□□□ 0.03
ARHGEF40-208ENST00000557498 SMARCB1Q12824 385 aa15.21■□□□□ 0.03
ARHGEF40-208ENST00000557498 PSMD5Q16401 504 aa15.21■□□□□ 0.03
ARHGEF40-208ENST00000557498 RAB41Q5JT25 222 aa15.21■□□□□ 0.03
ARHGEF40-208ENST00000557498 RASIP1Q5U651 963 aa15.21■□□□□ 0.03
ARHGEF40-208ENST00000557498 KIAA1841Q6NSI8 718 aa15.21■□□□□ 0.03
ARHGEF40-208ENST00000557498 VSTM1Q6UX27 236 aa15.21■□□□□ 0.03
ARHGEF40-208ENST00000557498 RSPO2Q6UXX9 243 aaPredicted RBP15.21■□□□□ 0.03
ARHGEF40-208ENST00000557498 SLC26A9Q7LBE3 791 aa15.21■□□□□ 0.03
ARHGEF40-208ENST00000557498 GPRIN1Q7Z2K8 1008 aa15.21■□□□□ 0.03
ARHGEF40-208ENST00000557498 DDX53Q86TM3 631 aaKnown RBP15.21■□□□□ 0.03
ARHGEF40-208ENST00000557498 SCUBE3Q8IX30 993 aa15.21■□□□□ 0.03
ARHGEF40-208ENST00000557498 EMC1Q8N766 993 aa15.21■□□□□ 0.03
ARHGEF40-208ENST00000557498 UBL4BQ8N7F7 174 aa15.21■□□□□ 0.03
ARHGEF40-208ENST00000557498 CLEC4CQ8WTT0 213 aa15.21■□□□□ 0.03
ARHGEF40-208ENST00000557498 COG1Q8WTW3 980 aa15.21■□□□□ 0.03
ARHGEF40-208ENST00000557498 PBKQ96KB5 322 aa15.21■□□□□ 0.03
ARHGEF40-208ENST00000557498 RAD9AQ99638 391 aa15.21■□□□□ 0.03
ARHGEF40-208ENST00000557498 PCDHB12Q9Y5F1 795 aa15.21■□□□□ 0.03
ARHGEF40-208ENST00000557498 CCDC66A2RUB6 948 aa15.2■□□□□ 0.02
ARHGEF40-208ENST00000557498 MTMR11A4FU01 709 aa15.2■□□□□ 0.02
ARHGEF40-208ENST00000557498 C2CD4BA6NLJ0 364 aa15.2■□□□□ 0.02
ARHGEF40-208ENST00000557498 KCNK3O14649 394 aa15.2■□□□□ 0.02
ARHGEF40-208ENST00000557498 ZNF185O15231 689 aa15.2■□□□□ 0.02
ARHGEF40-208ENST00000557498 TLL1O43897 1013 aa15.2■□□□□ 0.02
ARHGEF40-208ENST00000557498 SLU7O95391 586 aaKnown RBP15.2■□□□□ 0.02
ARHGEF40-208ENST00000557498 CYP2F1P24903 491 aa15.2■□□□□ 0.02
ARHGEF40-208ENST00000557498 CXCR5P32302 372 aa15.2■□□□□ 0.02
ARHGEF40-208ENST00000557498 MAGEA11P43364 429 aa15.2■□□□□ 0.02
ARHGEF40-208ENST00000557498 ARPP19P56211 112 aa15.2■□□□□ 0.02
ARHGEF40-208ENST00000557498 MRPS5P82675 430 aaKnown RBP15.2■□□□□ 0.02
ARHGEF40-208ENST00000557498 DSG1Q02413 1049 aa15.2■□□□□ 0.02
ARHGEF40-208ENST00000557498 CKAP4Q07065 602 aaKnown RBP15.2■□□□□ 0.02
ARHGEF40-208ENST00000557498 GPR17Q13304 367 aa15.2■□□□□ 0.02
ARHGEF40-208ENST00000557498 EFHC1Q5JVL4 640 aa15.2■□□□□ 0.02
ARHGEF40-208ENST00000557498 SLC8B1Q6J4K2 584 aa15.2■□□□□ 0.02
ARHGEF40-208ENST00000557498 TRNP1Q6NT89 227 aa15.2■□□□□ 0.02
ARHGEF40-208ENST00000557498 FBXO22Q8NEZ5 403 aa15.2■□□□□ 0.02
ARHGEF40-208ENST00000557498 C2orf15Q8WU43 125 aaKnown RBP15.2■□□□□ 0.02
ARHGEF40-208ENST00000557498 RXFP2Q8WXD0 754 aa15.2■□□□□ 0.02
ARHGEF40-208ENST00000557498 KRT35Q92764 455 aa15.2■□□□□ 0.02
ARHGEF40-208ENST00000557498 KHSRPQ92945 711 aaKnown RBP eCLIP15.2■□□□□ 0.02
ARHGEF40-208ENST00000557498 CLP1Q92989 425 aaKnown RBP15.2■□□□□ 0.02
ARHGEF40-208ENST00000557498 PGLYRP2Q96PD5 576 aa15.2■□□□□ 0.02
ARHGEF40-208ENST00000557498 ULBP1Q9BZM6 244 aa15.2■□□□□ 0.02
ARHGEF40-208ENST00000557498 CNGB3Q9NQW8 809 aa15.2■□□□□ 0.02
ARHGEF40-208ENST00000557498 ASNSD1Q9NWL6 643 aa15.2■□□□□ 0.02
ARHGEF40-208ENST00000557498 STK39Q9UEW8 545 aa15.2■□□□□ 0.02
ARHGEF40-208ENST00000557498 USTQ9Y2C2 406 aa15.2■□□□□ 0.02
ARHGEF40-208ENST00000557498 F8VP50 259 aa15.19■□□□□ 0.02
ARHGEF40-208ENST00000557498 TRIM66O15016 1216 aa15.19■□□□□ 0.02
ARHGEF40-208ENST00000557498 SART1O43290 800 aaKnown RBP15.19■□□□□ 0.02
ARHGEF40-208ENST00000557498 PSTPIP1O43586 416 aa15.19■□□□□ 0.02
ARHGEF40-208ENST00000557498 HSF2BPO75031 334 aa15.19■□□□□ 0.02
ARHGEF40-208ENST00000557498 DAB1O75553 588 aa15.19■□□□□ 0.02
ARHGEF40-208ENST00000557498 GRAP2O75791 330 aa15.19■□□□□ 0.02
ARHGEF40-208ENST00000557498 URODP06132 367 aa15.19■□□□□ 0.02
ARHGEF40-208ENST00000557498 FLT3P36888 993 aa15.19■□□□□ 0.02
ARHGEF40-208ENST00000557498 GRIK1P39086 918 aa15.19■□□□□ 0.02
ARHGEF40-208ENST00000557498 MARCKSL1P49006 195 aa15.19■□□□□ 0.02
ARHGEF40-208ENST00000557498 NDUFV1P49821 464 aa15.19■□□□□ 0.02
ARHGEF40-208ENST00000557498 ZNF143P52747 638 aaPredicted RBP15.19■□□□□ 0.02
ARHGEF40-208ENST00000557498 DAOAP59103 153 aa15.19■□□□□ 0.02
ARHGEF40-208ENST00000557498 RNASE9P60153 205 aaKnown RBP15.19■□□□□ 0.02
ARHGEF40-208ENST00000557498 TAF5Q15542 800 aa15.19■□□□□ 0.02
ARHGEF40-208ENST00000557498 ARCQ7LC44 396 aa15.19■□□□□ 0.02
ARHGEF40-208ENST00000557498 CREG2Q8IUH2 290 aa15.19■□□□□ 0.02
ARHGEF40-208ENST00000557498 SCML4Q8N228 414 aa15.19■□□□□ 0.02
ARHGEF40-208ENST00000557498 CEP112Q8N8E3 955 aa15.19■□□□□ 0.02
ARHGEF40-208ENST00000557498 SPPL2BQ8TCT7 592 aa15.19■□□□□ 0.02
ARHGEF40-208ENST00000557498 ALG3Q92685 438 aa15.19■□□□□ 0.02
ARHGEF40-208ENST00000557498 CAPZA3Q96KX2 299 aa15.19■□□□□ 0.02
ARHGEF40-208ENST00000557498 C8orf48Q96LL4 319 aa15.19■□□□□ 0.02
ARHGEF40-208ENST00000557498 CNPY3Q9BT09 278 aa15.19■□□□□ 0.02
ARHGEF40-208ENST00000557498 CARD6Q9BX69 1037 aa15.19■□□□□ 0.02
ARHGEF40-208ENST00000557498 PCDHA3Q9Y5H8 950 aa15.19■□□□□ 0.02
ARHGEF40-208ENST00000557498 NR2E3Q9Y5X4 410 aa15.19■□□□□ 0.02
ARHGEF40-208ENST00000557498 CDY1Q9Y6F8 540 aa15.19■□□□□ 0.02
ARHGEF40-208ENST00000557498 LCHNA4D1U4 455 aa15.18■□□□□ 0.02
ARHGEF40-208ENST00000557498 C2CD2LO14523 706 aa15.18■□□□□ 0.02
ARHGEF40-208ENST00000557498 ADAM12O43184 909 aa15.18■□□□□ 0.02
ARHGEF40-208ENST00000557498 FGF18O76093 207 aa15.18■□□□□ 0.02
ARHGEF40-208ENST00000557498 VNN2O95498 520 aa15.18■□□□□ 0.02
ARHGEF40-208ENST00000557498 GLI1P08151 1106 aa15.18■□□□□ 0.02
ARHGEF40-208ENST00000557498 PDGFRAP16234 1089 aa15.18■□□□□ 0.02
ARHGEF40-208ENST00000557498 PEX5P50542 639 aa15.18■□□□□ 0.02
ARHGEF40-208ENST00000557498 TAS2R40P59535 323 aa15.18■□□□□ 0.02
ARHGEF40-208ENST00000557498 ROR1Q01973 937 aa15.18■□□□□ 0.02
ARHGEF40-208ENST00000557498 KRT17Q04695 432 aa15.18■□□□□ 0.02
ARHGEF40-208ENST00000557498 ACAP1Q15027 740 aa15.18■□□□□ 0.02
ARHGEF40-208ENST00000557498 DCAF12L1Q5VU92 463 aa15.18■□□□□ 0.02
ARHGEF40-208ENST00000557498 DAB2IPQ5VWQ8 1189 aa15.18■□□□□ 0.02
ARHGEF40-208ENST00000557498 CC2D1AQ6P1N0 951 aaPredicted RBP15.18■□□□□ 0.02
ARHGEF40-208ENST00000557498 RNF19BQ6ZMZ0 732 aa15.18■□□□□ 0.02
ARHGEF40-208ENST00000557498 SCN4BQ8IWT1 228 aa15.18■□□□□ 0.02
ARHGEF40-208ENST00000557498 RHOT1Q8IXI2 618 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms