RNA–Protein interactions for RNA: ENST00000557439.5

XRCC3-218, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 5

Gene XRCC3, Length 2,599 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-218ENST00000557439 KANSL3Q9P2N6 904 aa18.53■□□□□ 0.56
XRCC3-218ENST00000557439 NKX1-2Q9UD57 310 aaPredicted RBP18.53■□□□□ 0.56
XRCC3-218ENST00000557439 ZMYND8Q9ULU4 1186 aaPredicted RBP18.53■□□□□ 0.56
XRCC3-218ENST00000557439 KBTBD13C9JR72 458 aa18.52■□□□□ 0.56
XRCC3-218ENST00000557439 YARSP54577 528 aaKnown RBP18.52■□□□□ 0.56
XRCC3-218ENST00000557439 TAF1BQ53T94 588 aaPredicted RBP18.52■□□□□ 0.56
XRCC3-218ENST00000557439 TLDC1Q6P9B6 456 aa18.52■□□□□ 0.56
XRCC3-218ENST00000557439 ADGRD1Q6QNK2 874 aa18.52■□□□□ 0.56
XRCC3-218ENST00000557439 PRPF39Q86UA1 669 aaKnown RBP18.52■□□□□ 0.56
XRCC3-218ENST00000557439 ZNF276Q8N554 614 aa18.52■□□□□ 0.56
XRCC3-218ENST00000557439 LHX5Q9H2C1 402 aa18.52■□□□□ 0.56
XRCC3-218ENST00000557439 LOC285556D6RIA3 1793 aa18.52■□□□□ 0.56
XRCC3-218ENST00000557439 PTPRFP10586 1907 aa18.52■□□□□ 0.56
XRCC3-218ENST00000557439 A0A087WZ62 844 aa18.52■□□□□ 0.56
XRCC3-218ENST00000557439 EIF4E1BA6NMX2 242 aaKnown RBP18.52■□□□□ 0.56
XRCC3-218ENST00000557439 ADM5C9JUS6 153 aa18.52■□□□□ 0.56
XRCC3-218ENST00000557439 E5RJQ4 531 aa18.52■□□□□ 0.56
XRCC3-218ENST00000557439 MCF2LO15068 1137 aa18.52■□□□□ 0.56
XRCC3-218ENST00000557439 EPHB2P29323 1055 aa18.52■□□□□ 0.56
XRCC3-218ENST00000557439 GBP2P32456 591 aaPredicted RBP18.52■□□□□ 0.56
XRCC3-218ENST00000557439 GPD2P43304 727 aa18.52■□□□□ 0.56
XRCC3-218ENST00000557439 YWHAGP61981 247 aaKnown RBP eCLIP18.52■□□□□ 0.56
XRCC3-218ENST00000557439 SEPT7Q16181 437 aaKnown RBP18.52■□□□□ 0.56
XRCC3-218ENST00000557439 KBTBD12Q3ZCT8 623 aa18.52■□□□□ 0.56
XRCC3-218ENST00000557439 ZC3H12AQ5D1E8 599 aaKnown RBP18.52■□□□□ 0.56
XRCC3-218ENST00000557439 OR6B2Q6IFH4 312 aa18.52■□□□□ 0.56
XRCC3-218ENST00000557439 SCYL2Q6P3W7 929 aa18.52■□□□□ 0.56
XRCC3-218ENST00000557439 CYP4V2Q6ZWL3 525 aaPredicted RBP18.52■□□□□ 0.56
XRCC3-218ENST00000557439 MTDHQ86UE4 582 aaKnown RBP18.52■□□□□ 0.56
XRCC3-218ENST00000557439 CFAP36Q96G28 342 aa18.52■□□□□ 0.56
XRCC3-218ENST00000557439 TMEM176AQ96HP8 235 aa18.52■□□□□ 0.56
XRCC3-218ENST00000557439 LPIN3Q9BQK8 851 aa18.52■□□□□ 0.56
XRCC3-218ENST00000557439 FDXACB1Q9BRP7 624 aaPredicted RBP18.52■□□□□ 0.56
XRCC3-218ENST00000557439 GPRC5DQ9NZD1 345 aa18.52■□□□□ 0.56
XRCC3-218ENST00000557439 HEY1Q9Y5J3 304 aa18.52■□□□□ 0.56
XRCC3-218ENST00000557439 MED7O43513 233 aa18.51■□□□□ 0.55
XRCC3-218ENST00000557439 CILPO75339 1184 aa18.51■□□□□ 0.55
XRCC3-218ENST00000557439 CNMDO75829 334 aa18.51■□□□□ 0.55
XRCC3-218ENST00000557439 RNF8O76064 485 aa18.51■□□□□ 0.55
XRCC3-218ENST00000557439 VTNP04004 478 aa18.51■□□□□ 0.55
XRCC3-218ENST00000557439 FAAP100Q0VG06 881 aa18.51■□□□□ 0.55
XRCC3-218ENST00000557439 NLRP9Q7RTR0 991 aa18.51■□□□□ 0.55
XRCC3-218ENST00000557439 PDIK1LQ8N165 341 aa18.51■□□□□ 0.55
XRCC3-218ENST00000557439 CMASQ8NFW8 434 aaPredicted RBP18.51■□□□□ 0.55
XRCC3-218ENST00000557439 PPP1R13LQ8WUF5 828 aa18.51■□□□□ 0.55
XRCC3-218ENST00000557439 RXFP2Q8WXD0 754 aa18.51■□□□□ 0.55
XRCC3-218ENST00000557439 FAM167AQ96KS9 214 aa18.51■□□□□ 0.55
XRCC3-218ENST00000557439 EBF2Q9HAK2 575 aa18.51■□□□□ 0.55
XRCC3-218ENST00000557439 IFT122Q9HBG6 1241 aa18.51■□□□□ 0.55
XRCC3-218ENST00000557439 WDR3Q9UNX4 943 aaKnown RBP eCLIP18.51■□□□□ 0.55
XRCC3-218ENST00000557439 A0A0G2JND7 137 aa18.51■□□□□ 0.55
XRCC3-218ENST00000557439 TCRBV9S1A1TA0A576 114 aa18.51■□□□□ 0.55
XRCC3-218ENST00000557439 H7C0C1 242 aa18.51■□□□□ 0.55
XRCC3-218ENST00000557439 APOC4-APOC2K7ER74 178 aa18.51■□□□□ 0.55
XRCC3-218ENST00000557439 APOC2P02655 101 aa18.51■□□□□ 0.55
XRCC3-218ENST00000557439 GM2AP17900 193 aa18.51■□□□□ 0.55
XRCC3-218ENST00000557439 PHBP35232 272 aa18.51■□□□□ 0.55
XRCC3-218ENST00000557439 ATP5OP48047 213 aa18.51■□□□□ 0.55
XRCC3-218ENST00000557439 SURF1Q15526 300 aa18.51■□□□□ 0.55
XRCC3-218ENST00000557439 TAZQ16635 292 aa18.51■□□□□ 0.55
XRCC3-218ENST00000557439 NOL9Q5SY16 702 aaKnown RBP18.51■□□□□ 0.55
XRCC3-218ENST00000557439 FAM183BPQ6ZVS7 135 aa18.51■□□□□ 0.55
XRCC3-218ENST00000557439 PCGF5Q86SE9 256 aa18.51■□□□□ 0.55
XRCC3-218ENST00000557439 CCDC125Q86Z20 511 aa18.51■□□□□ 0.55
XRCC3-218ENST00000557439 CXorf38Q8TB03 319 aa18.51■□□□□ 0.55
XRCC3-218ENST00000557439 SLC7A6OSQ96CW6 309 aaPredicted RBP18.51■□□□□ 0.55
XRCC3-218ENST00000557439 SENP1Q9P0U3 644 aa18.51■□□□□ 0.55
XRCC3-218ENST00000557439 NR2E3Q9Y5X4 410 aa18.51■□□□□ 0.55
XRCC3-218ENST00000557439 TRIP11Q15643 1979 aa18.51■□□□□ 0.55
XRCC3-218ENST00000557439 TGFB3P10600 412 aa18.5■□□□□ 0.55
XRCC3-218ENST00000557439 BAG6P46379 1132 aa18.5■□□□□ 0.55
XRCC3-218ENST00000557439 BANPQ8N9N5 519 aa18.5■□□□□ 0.55
XRCC3-218ENST00000557439 DHRS4Q9BTZ2 278 aa18.5■□□□□ 0.55
XRCC3-218ENST00000557439 C15orf41Q9Y2V0 281 aa18.5■□□□□ 0.55
XRCC3-218ENST00000557439 E7ESA3 106 aa18.5■□□□□ 0.55
XRCC3-218ENST00000557439 F5H423 210 aaPredicted RBP18.5■□□□□ 0.55
XRCC3-218ENST00000557439 PDGFRAP16234 1089 aa18.5■□□□□ 0.55
XRCC3-218ENST00000557439 NDST1P52848 882 aa18.5■□□□□ 0.55
XRCC3-218ENST00000557439 CCDC15Q0P6D6 951 aa18.5■□□□□ 0.55
XRCC3-218ENST00000557439 PTK7Q13308 1070 aa18.5■□□□□ 0.55
XRCC3-218ENST00000557439 CA9Q16790 459 aa18.5■□□□□ 0.55
XRCC3-218ENST00000557439 RGS9BPQ6ZS82 235 aa18.5■□□□□ 0.55
XRCC3-218ENST00000557439 TTC13Q8NBP0 860 aa18.5■□□□□ 0.55
XRCC3-218ENST00000557439 SLC16A10Q8TF71 515 aa18.5■□□□□ 0.55
XRCC3-218ENST00000557439 TTC17Q96AE7 1141 aa18.5■□□□□ 0.55
XRCC3-218ENST00000557439 FAM111AQ96PZ2 611 aa18.5■□□□□ 0.55
XRCC3-218ENST00000557439 C2orf40Q9H1Z8 148 aa18.5■□□□□ 0.55
XRCC3-218ENST00000557439 TXLNGQ9NUQ3 528 aa18.5■□□□□ 0.55
XRCC3-218ENST00000557439 BRCA1P38398 1863 aaKnown RBP18.49■□□□□ 0.55
XRCC3-218ENST00000557439 TXNP10599 105 aaKnown RBP18.49■□□□□ 0.55
XRCC3-218ENST00000557439 ROR1Q01973 937 aa18.49■□□□□ 0.55
XRCC3-218ENST00000557439 SLC10A6Q3KNW5 377 aa18.49■□□□□ 0.55
XRCC3-218ENST00000557439 FNIP1Q8TF40 1166 aa18.49■□□□□ 0.55
XRCC3-218ENST00000557439 FAF2Q96CS3 445 aa18.49■□□□□ 0.55
XRCC3-218ENST00000557439 MCRS1Q96EZ8 462 aa18.49■□□□□ 0.55
XRCC3-218ENST00000557439 HPDLQ96IR7 371 aa18.49■□□□□ 0.55
XRCC3-218ENST00000557439 NGRNQ9NPE2 291 aaKnown RBP18.49■□□□□ 0.55
XRCC3-218ENST00000557439 CYLDQ9NQC7 956 aa18.49■□□□□ 0.55
XRCC3-218ENST00000557439 RAB6BQ9NRW1 208 aa18.49■□□□□ 0.55
XRCC3-218ENST00000557439 HCRTO43612 131 aa18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms