RNA–Protein interactions for RNA: ENST00000556534.1

SCFD1-221, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 864 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-221ENST00000556534 IL31Q6EBC2 164 aa5.54□□□□□ -1.52
SCFD1-221ENST00000556534 C11orf96Q7Z7L8 435 aa5.54□□□□□ -1.52
SCFD1-221ENST00000556534 CCDC146Q8IYE0 955 aa5.54□□□□□ -1.52
SCFD1-221ENST00000556534 IPCEF1Q8WWN9 437 aaPredicted RBP5.54□□□□□ -1.52
SCFD1-221ENST00000556534 BBC3Q96PG8 261 aaPredicted RBP5.54□□□□□ -1.52
SCFD1-221ENST00000556534 C17orf80Q9BSJ5 609 aa5.54□□□□□ -1.52
SCFD1-221ENST00000556534 COLEC11Q9BWP8 271 aa5.54□□□□□ -1.52
SCFD1-221ENST00000556534 AS3MTQ9HBK9 375 aa5.54□□□□□ -1.52
SCFD1-221ENST00000556534 C11orf21Q9P2W6 132 aa5.54□□□□□ -1.52
SCFD1-221ENST00000556534 ADAM21Q9UKJ8 722 aa5.54□□□□□ -1.52
SCFD1-221ENST00000556534 PHTF1Q9UMS5 762 aa5.54□□□□□ -1.52
SCFD1-221ENST00000556534 AQP7P3A6NL99 342 aa5.53□□□□□ -1.52
SCFD1-221ENST00000556534 CLCA1A8K7I4 914 aa5.53□□□□□ -1.52
SCFD1-221ENST00000556534 RASA4BC9J798 803 aa5.53□□□□□ -1.52
SCFD1-221ENST00000556534 RASA4O43374 803 aa5.53□□□□□ -1.52
SCFD1-221ENST00000556534 TJP3O95049 919 aa5.53□□□□□ -1.52
SCFD1-221ENST00000556534 INMTO95050 263 aa5.53□□□□□ -1.52
SCFD1-221ENST00000556534 HGFP14210 728 aa5.53□□□□□ -1.52
SCFD1-221ENST00000556534 TPH1P17752 444 aa5.53□□□□□ -1.52
SCFD1-221ENST00000556534 FGFR2P21802 821 aa5.53□□□□□ -1.52
SCFD1-221ENST00000556534 CTGFP29279 349 aa5.53□□□□□ -1.52
SCFD1-221ENST00000556534 STT3AP46977 705 aa5.53□□□□□ -1.52
SCFD1-221ENST00000556534 CCT8P50990 548 aa5.53□□□□□ -1.52
SCFD1-221ENST00000556534 ALDH5A1P51649 535 aaPredicted RBP5.53□□□□□ -1.52
SCFD1-221ENST00000556534 NEK3P51956 506 aa5.53□□□□□ -1.52
SCFD1-221ENST00000556534 TPTEP56180 551 aa5.53□□□□□ -1.52
SCFD1-221ENST00000556534 CYP1B1Q16678 543 aa5.53□□□□□ -1.52
SCFD1-221ENST00000556534 ANKRD16Q6P6B7 361 aa5.53□□□□□ -1.52
SCFD1-221ENST00000556534 RASAL3Q86YV0 1011 aa5.53□□□□□ -1.52
SCFD1-221ENST00000556534 CCDC33Q8N5R6 958 aa5.53□□□□□ -1.52
SCFD1-221ENST00000556534 BOLLQ8N9W6 283 aaKnown RBP5.53□□□□□ -1.52
SCFD1-221ENST00000556534 ATP11CQ8NB49 1132 aa5.53□□□□□ -1.52
SCFD1-221ENST00000556534 SARAFQ96BY9 339 aa5.53□□□□□ -1.52
SCFD1-221ENST00000556534 ZG16BQ96DA0 208 aa5.53□□□□□ -1.52
SCFD1-221ENST00000556534 FAM83DQ9H4H8 585 aa5.53□□□□□ -1.52
SCFD1-221ENST00000556534 RIOX1Q9H6W3 641 aa5.53□□□□□ -1.52
SCFD1-221ENST00000556534 ARPP21Q9UBL0 812 aaPredicted RBP5.53□□□□□ -1.52
SCFD1-221ENST00000556534 AGPSO00116 658 aa5.52□□□□□ -1.53
SCFD1-221ENST00000556534 THAP12O43422 761 aa5.52□□□□□ -1.53
SCFD1-221ENST00000556534 NDUFB7P17568 137 aa5.52□□□□□ -1.53
SCFD1-221ENST00000556534 UQCRC1P31930 480 aa5.52□□□□□ -1.53
SCFD1-221ENST00000556534 ALDH9A1P49189 494 aa5.52□□□□□ -1.53
SCFD1-221ENST00000556534 PICALMQ13492 652 aa5.52□□□□□ -1.53
SCFD1-221ENST00000556534 PMS2P11Q13670 270 aa5.52□□□□□ -1.53
SCFD1-221ENST00000556534 KCNAB1Q14722 419 aa5.52□□□□□ -1.53
SCFD1-221ENST00000556534 STRIP1Q5VSL9 837 aa5.52□□□□□ -1.53
SCFD1-221ENST00000556534 DPY19L3Q6ZPD9 716 aa5.52□□□□□ -1.53
SCFD1-221ENST00000556534 Q6ZWC4 215 aa5.52□□□□□ -1.53
SCFD1-221ENST00000556534 RNF44Q7L0R7 432 aa5.52□□□□□ -1.53
SCFD1-221ENST00000556534 WDR53Q7Z5U6 358 aaPredicted RBP5.52□□□□□ -1.53
SCFD1-221ENST00000556534 CAND1Q86VP6 1230 aaKnown RBP5.52□□□□□ -1.53
SCFD1-221ENST00000556534 ARHGEF25Q86VW2 580 aa5.52□□□□□ -1.53
SCFD1-221ENST00000556534 ADGRG3Q86Y34 549 aa5.52□□□□□ -1.53
SCFD1-221ENST00000556534 SDR16C5Q8N3Y7 309 aa5.52□□□□□ -1.53
SCFD1-221ENST00000556534 LRRC71Q8N4P6 559 aa5.52□□□□□ -1.53
SCFD1-221ENST00000556534 VGLL2Q8N8G2 317 aa5.52□□□□□ -1.53
SCFD1-221ENST00000556534 RP9Q8TA86 221 aaKnown RBP5.52□□□□□ -1.53
SCFD1-221ENST00000556534 PARD3BQ8TEW8 1205 aa5.52□□□□□ -1.53
SCFD1-221ENST00000556534 XAGE5Q8WWM1 108 aa5.52□□□□□ -1.53
SCFD1-221ENST00000556534 HAPLN3Q96S86 360 aa5.52□□□□□ -1.53
SCFD1-221ENST00000556534 VN1R3Q9BXE9 311 aa5.52□□□□□ -1.53
SCFD1-221ENST00000556534 FSD1LQ9BXM9 530 aa5.52□□□□□ -1.53
SCFD1-221ENST00000556534 CPNE5Q9HCH3 593 aa5.52□□□□□ -1.53
SCFD1-221ENST00000556534 STARD7Q9NQZ5 370 aa5.52□□□□□ -1.53
SCFD1-221ENST00000556534 CHST12Q9NRB3 414 aa5.52□□□□□ -1.53
SCFD1-221ENST00000556534 DUSP22Q9NRW4 184 aa5.52□□□□□ -1.53
SCFD1-221ENST00000556534 MYO1AQ9UBC5 1043 aa5.52□□□□□ -1.53
SCFD1-221ENST00000556534 VPS51Q9UID3 782 aa5.52□□□□□ -1.53
SCFD1-221ENST00000556534 ZNF213O14771 459 aa5.51□□□□□ -1.53
SCFD1-221ENST00000556534 APOL1O14791 398 aa5.51□□□□□ -1.53
SCFD1-221ENST00000556534 NCK2O43639 380 aa5.51□□□□□ -1.53
SCFD1-221ENST00000556534 RGS10O43665 173 aa5.51□□□□□ -1.53
SCFD1-221ENST00000556534 ENGP17813 658 aa5.51□□□□□ -1.53
SCFD1-221ENST00000556534 TNFSF4P23510 183 aa5.51□□□□□ -1.53
SCFD1-221ENST00000556534 EPHA3P29320 983 aa5.51□□□□□ -1.53
SCFD1-221ENST00000556534 CYP2C18P33260 490 aa5.51□□□□□ -1.53
SCFD1-221ENST00000556534 AARS2Q5JTZ9 985 aaKnown RBP5.51□□□□□ -1.53
SCFD1-221ENST00000556534 AKNAD1Q5T1N1 836 aa5.51□□□□□ -1.53
SCFD1-221ENST00000556534 RRAGBQ5VZM2 374 aa5.51□□□□□ -1.53
SCFD1-221ENST00000556534 FBXO42Q6P3S6 717 aa5.51□□□□□ -1.53
SCFD1-221ENST00000556534 AMIGO2Q86SJ2 522 aa5.51□□□□□ -1.53
SCFD1-221ENST00000556534 OR2C3Q8N628 320 aa5.51□□□□□ -1.53
SCFD1-221ENST00000556534 SMCR8Q8TEV9 937 aaPredicted RBP5.51□□□□□ -1.53
SCFD1-221ENST00000556534 TBC1D5Q92609 795 aa5.51□□□□□ -1.53
SCFD1-221ENST00000556534 RSPRY1Q96DX4 576 aa5.51□□□□□ -1.53
SCFD1-221ENST00000556534 RIPOR3Q96MK2 946 aa5.51□□□□□ -1.53
SCFD1-221ENST00000556534 PRR25Q96S07 402 aa5.51□□□□□ -1.53
SCFD1-221ENST00000556534 SELENOOQ9BVL4 669 aa5.51□□□□□ -1.53
SCFD1-221ENST00000556534 GJB4Q9NTQ9 266 aa5.51□□□□□ -1.53
SCFD1-221ENST00000556534 TBC1D23Q9NUY8 699 aa5.51□□□□□ -1.53
SCFD1-221ENST00000556534 RIMKLBQ9ULI2 386 aa5.51□□□□□ -1.53
SCFD1-221ENST00000556534 PADI4Q9UM07 663 aa5.51□□□□□ -1.53
SCFD1-221ENST00000556534 DRG1Q9Y295 367 aaKnown RBP5.51□□□□□ -1.53
SCFD1-221ENST00000556534 FER1L4A9Z1Z3 1794 aa5.51□□□□□ -1.53
SCFD1-221ENST00000556534 LRRC3CA6NJW4 275 aa5.5□□□□□ -1.53
SCFD1-221ENST00000556534 SUV39H1O43463 412 aa5.5□□□□□ -1.53
SCFD1-221ENST00000556534 IGLV2-14P01704 120 aa5.5□□□□□ -1.53
SCFD1-221ENST00000556534 GPD1P21695 349 aa5.5□□□□□ -1.53
SCFD1-221ENST00000556534 PRKAR1BP31321 381 aa5.5□□□□□ -1.53
SCFD1-221ENST00000556534 PGDP52209 483 aa5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms