RNA–Protein interactions for RNA: ENST00000556461.1

VTI1B-206, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-206ENST00000556461 ARHGAP29Q52LW3 1261 aa8.6□□□□□ -1.03
VTI1B-206ENST00000556461 CLEC20AQ6ZU45 233 aa8.6□□□□□ -1.03
VTI1B-206ENST00000556461 FRMD5Q7Z6J6 570 aa8.6□□□□□ -1.03
VTI1B-206ENST00000556461 SLC4A11Q8NBS3 891 aa8.6□□□□□ -1.03
VTI1B-206ENST00000556461 TTC16Q8NEE8 873 aa8.6□□□□□ -1.03
VTI1B-206ENST00000556461 CSGALNACT1Q8TDX6 532 aa8.6□□□□□ -1.03
VTI1B-206ENST00000556461 FAM3CQ92520 227 aa8.6□□□□□ -1.03
VTI1B-206ENST00000556461 KAT5Q92993 513 aa8.6□□□□□ -1.03
VTI1B-206ENST00000556461 JAKMIP2Q96AA8 810 aa8.6□□□□□ -1.03
VTI1B-206ENST00000556461 CLDN23Q96B33 292 aa8.6□□□□□ -1.03
VTI1B-206ENST00000556461 SMARCD1Q96GM5 515 aa8.6□□□□□ -1.03
VTI1B-206ENST00000556461 CEP295NLQ96MC4 621 aa8.6□□□□□ -1.03
VTI1B-206ENST00000556461 CEP63Q96MT8 703 aa8.6□□□□□ -1.03
VTI1B-206ENST00000556461 NT5C1AQ9BXI3 368 aa8.6□□□□□ -1.03
VTI1B-206ENST00000556461 GTPBP4Q9BZE4 634 aaKnown RBP8.6□□□□□ -1.03
VTI1B-206ENST00000556461 OSBPL6Q9BZF3 934 aa8.6□□□□□ -1.03
VTI1B-206ENST00000556461 IMPG2Q9BZV3 1241 aa8.6□□□□□ -1.03
VTI1B-206ENST00000556461 EBF3Q9H4W6 596 aa8.6□□□□□ -1.03
VTI1B-206ENST00000556461 CSNK1G1Q9HCP0 422 aa8.6□□□□□ -1.03
VTI1B-206ENST00000556461 DMAP1Q9NPF5 467 aaPredicted RBP8.6□□□□□ -1.03
VTI1B-206ENST00000556461 CISHQ9NSE2 258 aa8.6□□□□□ -1.03
VTI1B-206ENST00000556461 RBM12Q9NTZ6 932 aaKnown RBP8.6□□□□□ -1.03
VTI1B-206ENST00000556461 IL37Q9NZH6 218 aa8.6□□□□□ -1.03
VTI1B-206ENST00000556461 TRPM5Q9NZQ8 1165 aa8.6□□□□□ -1.03
VTI1B-206ENST00000556461 GMIPQ9P107 970 aa8.6□□□□□ -1.03
VTI1B-206ENST00000556461 CHORDC1Q9UHD1 332 aaPredicted RBP8.6□□□□□ -1.03
VTI1B-206ENST00000556461 WNT6Q9Y6F9 365 aa8.6□□□□□ -1.03
VTI1B-206ENST00000556461 CFAP54Q96N23 3096 aa8.6□□□□□ -1.03
VTI1B-206ENST00000556461 DENND4CQ5VZ89 1909 aa8.6□□□□□ -1.03
VTI1B-206ENST00000556461 GVINP1Q7Z2Y8 2422 aa8.59□□□□□ -1.03
VTI1B-206ENST00000556461 ANAPC1Q9H1A4 1944 aa8.59□□□□□ -1.03
VTI1B-206ENST00000556461 SOBPA7XYQ1 873 aa8.59□□□□□ -1.03
VTI1B-206ENST00000556461 SPECC1L-ADORA2AF8WAN1 911 aa8.59□□□□□ -1.03
VTI1B-206ENST00000556461 LEFTY2O00292 366 aa8.59□□□□□ -1.03
VTI1B-206ENST00000556461 MAN2B1O00754 1011 aa8.59□□□□□ -1.03
VTI1B-206ENST00000556461 STX10O60499 249 aa8.59□□□□□ -1.03
VTI1B-206ENST00000556461 OLFM2O95897 454 aa8.59□□□□□ -1.03
VTI1B-206ENST00000556461 OAS1P00973 400 aaKnown RBP8.59□□□□□ -1.03
VTI1B-206ENST00000556461 CALCAP01258 141 aa8.59□□□□□ -1.03
VTI1B-206ENST00000556461 USP17L7P0C7H9 530 aa8.59□□□□□ -1.03
VTI1B-206ENST00000556461 SP9P0CG40 484 aa8.59□□□□□ -1.03
VTI1B-206ENST00000556461 CHRNB1P11230 501 aa8.59□□□□□ -1.03
VTI1B-206ENST00000556461 HOXC13P31276 330 aa8.59□□□□□ -1.03
VTI1B-206ENST00000556461 CTHP32929 405 aa8.59□□□□□ -1.03
VTI1B-206ENST00000556461 FMO5P49326 533 aa8.59□□□□□ -1.03
VTI1B-206ENST00000556461 MRE11P49959 708 aa8.59□□□□□ -1.03
VTI1B-206ENST00000556461 KPNA1P52294 538 aaPredicted RBP8.59□□□□□ -1.03
VTI1B-206ENST00000556461 RAD23BP54727 409 aa8.59□□□□□ -1.03
VTI1B-206ENST00000556461 MTAPQ13126 283 aa8.59□□□□□ -1.03
VTI1B-206ENST00000556461 PON2Q15165 354 aa8.59□□□□□ -1.03
VTI1B-206ENST00000556461 CCDC40Q4G0X9 1142 aa8.59□□□□□ -1.03
VTI1B-206ENST00000556461 PPP1R26Q5T8A7 1209 aaPredicted RBP8.59□□□□□ -1.03
VTI1B-206ENST00000556461 TSSK4Q6SA08 328 aa8.59□□□□□ -1.03
VTI1B-206ENST00000556461 C1orf210Q8IVY1 113 aa8.59□□□□□ -1.03
VTI1B-206ENST00000556461 UBR7Q8N806 425 aa8.59□□□□□ -1.03
VTI1B-206ENST00000556461 LMO3Q8TAP4 145 aa8.59□□□□□ -1.03
VTI1B-206ENST00000556461 SH3RF2Q8TEC5 729 aa8.59□□□□□ -1.03
VTI1B-206ENST00000556461 FBXO32Q969P5 355 aa8.59□□□□□ -1.03
VTI1B-206ENST00000556461 WBP2Q969T9 261 aa8.59□□□□□ -1.03
VTI1B-206ENST00000556461 CYFIP2Q96F07 1278 aa8.59□□□□□ -1.03
VTI1B-206ENST00000556461 HNRNPABQ99729 332 aaKnown RBP8.59□□□□□ -1.03
VTI1B-206ENST00000556461 SRRTQ9BXP5 876 aaKnown RBP8.59□□□□□ -1.03
VTI1B-206ENST00000556461 LINC00597Q9H2U6 94 aa8.59□□□□□ -1.03
VTI1B-206ENST00000556461 CLSTN2Q9H4D0 955 aa8.59□□□□□ -1.03
VTI1B-206ENST00000556461 KIF9Q9HAQ2 790 aa8.59□□□□□ -1.03
VTI1B-206ENST00000556461 LMAN1LQ9HAT1 526 aa8.59□□□□□ -1.03
VTI1B-206ENST00000556461 FBRSL1Q9HCM7 1045 aaKnown RBP8.59□□□□□ -1.03
VTI1B-206ENST00000556461 LMBRD1Q9NUN5 540 aa8.59□□□□□ -1.03
VTI1B-206ENST00000556461 SPATA6Q9NWH7 488 aaPredicted RBP8.59□□□□□ -1.03
VTI1B-206ENST00000556461 C2orf42Q9NWW7 574 aa8.59□□□□□ -1.03
VTI1B-206ENST00000556461 SMPD4Q9NXE4 827 aa8.59□□□□□ -1.03
VTI1B-206ENST00000556461 ZMYM5Q9UJ78 669 aa8.59□□□□□ -1.03
VTI1B-206ENST00000556461 ARHGAP26Q9UNA1 814 aa8.59□□□□□ -1.03
VTI1B-206ENST00000556461 KIF26AQ9ULI4 1882 aaPredicted RBP8.59□□□□□ -1.03
VTI1B-206ENST00000556461 EP300Q09472 2414 aaPredicted RBP8.59□□□□□ -1.03
VTI1B-206ENST00000556461 ZNF292O60281 2723 aa8.59□□□□□ -1.03
VTI1B-206ENST00000556461 ATP8B3O60423 1300 aa8.58□□□□□ -1.04
VTI1B-206ENST00000556461 PTPRZ1P23471 2315 aaPredicted RBP8.58□□□□□ -1.04
VTI1B-206ENST00000556461 FAM92AA1XBS5 289 aa8.58□□□□□ -1.04
VTI1B-206ENST00000556461 TULP2O00295 520 aa8.58□□□□□ -1.04
VTI1B-206ENST00000556461 COCHO43405 550 aa8.58□□□□□ -1.04
VTI1B-206ENST00000556461 RTN3O95197 1032 aaPredicted RBP8.58□□□□□ -1.04
VTI1B-206ENST00000556461 ZDHHC11BP0C7U3 371 aa8.58□□□□□ -1.04
VTI1B-206ENST00000556461 FAM200BP0CF97 657 aa8.58□□□□□ -1.04
VTI1B-206ENST00000556461 PPP1R2P41236 205 aa8.58□□□□□ -1.04
VTI1B-206ENST00000556461 NBL1P41271 181 aa8.58□□□□□ -1.04
VTI1B-206ENST00000556461 RPS9P46781 194 aaKnown RBP8.58□□□□□ -1.04
VTI1B-206ENST00000556461 MLLT6P55198 1093 aaPredicted RBP8.58□□□□□ -1.04
VTI1B-206ENST00000556461 SLC7A9P82251 487 aa8.58□□□□□ -1.04
VTI1B-206ENST00000556461 PLCB2Q00722 1185 aa8.58□□□□□ -1.04
VTI1B-206ENST00000556461 CUL2Q13617 745 aa8.58□□□□□ -1.04
VTI1B-206ENST00000556461 RUNX3Q13761 415 aa8.58□□□□□ -1.04
VTI1B-206ENST00000556461 EML3Q32P44 896 aa8.58□□□□□ -1.04
VTI1B-206ENST00000556461 ITPRIPL2Q3MIP1 535 aa8.58□□□□□ -1.04
VTI1B-206ENST00000556461 FOXR2Q6PJQ5 311 aa8.58□□□□□ -1.04
VTI1B-206ENST00000556461 CLEC17AQ6ZS10 378 aa8.58□□□□□ -1.04
VTI1B-206ENST00000556461 Q6ZS52 159 aa8.58□□□□□ -1.04
VTI1B-206ENST00000556461 IRF2BP1Q8IU81 584 aa8.58□□□□□ -1.04
VTI1B-206ENST00000556461 TRIM59Q8IWR1 403 aa8.58□□□□□ -1.04
VTI1B-206ENST00000556461 TRIML1Q8N9V2 468 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms