RNA–Protein interactions for RNA: ENST00000556380.3

SRP54-210, Transcript of signal recognition particle 54, humanhuman

TSL 3

Gene SRP54, Length 600 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-210ENST00000556380 APTXQ7Z2E3 356 aaKnown RBP10.24□□□□□ -0.77
SRP54-210ENST00000556380 CREBRFQ8IUR6 639 aa10.24□□□□□ -0.77
SRP54-210ENST00000556380 FAM200AQ8TCP9 573 aa10.24□□□□□ -0.77
SRP54-210ENST00000556380 RSAD2Q8WXG1 361 aa10.24□□□□□ -0.77
SRP54-210ENST00000556380 FGF14Q92915 247 aa10.24□□□□□ -0.77
SRP54-210ENST00000556380 NXPE3Q969Y0 559 aa10.24□□□□□ -0.77
SRP54-210ENST00000556380 JAKMIP2Q96AA8 810 aa10.24□□□□□ -0.77
SRP54-210ENST00000556380 CYFIP2Q96F07 1278 aa10.24□□□□□ -0.77
SRP54-210ENST00000556380 TMEM176AQ96HP8 235 aa10.24□□□□□ -0.77
SRP54-210ENST00000556380 KCNK16Q96T55 309 aa10.24□□□□□ -0.77
SRP54-210ENST00000556380 SMOQ99835 787 aa10.24□□□□□ -0.77
SRP54-210ENST00000556380 SLC6A16Q9GZN6 736 aa10.24□□□□□ -0.77
SRP54-210ENST00000556380 EPHX3Q9H6B9 360 aa10.24□□□□□ -0.77
SRP54-210ENST00000556380 TRPV4Q9HBA0 871 aa10.24□□□□□ -0.77
SRP54-210ENST00000556380 SIX2Q9NPC8 291 aa10.24□□□□□ -0.77
SRP54-210ENST00000556380 FAM49BQ9NUQ9 324 aa10.24□□□□□ -0.77
SRP54-210ENST00000556380 GCNT4Q9P109 453 aa10.24□□□□□ -0.77
SRP54-210ENST00000556380 IGSF9Q9P2J2 1179 aa10.24□□□□□ -0.77
SRP54-210ENST00000556380 ZDBF2Q9HCK1 2354 aa10.24□□□□□ -0.77
SRP54-210ENST00000556380 FAM92AA1XBS5 289 aa10.23□□□□□ -0.77
SRP54-210ENST00000556380 HHLA1C9JL84 531 aa10.23□□□□□ -0.77
SRP54-210ENST00000556380 TADA3O75528 432 aa10.23□□□□□ -0.77
SRP54-210ENST00000556380 FGF19O95750 216 aa10.23□□□□□ -0.77
SRP54-210ENST00000556380 ZXDAP98168 799 aa10.23□□□□□ -0.77
SRP54-210ENST00000556380 APBA1Q02410 837 aa10.23□□□□□ -0.77
SRP54-210ENST00000556380 IQCB1Q15051 598 aa10.23□□□□□ -0.77
SRP54-210ENST00000556380 KRT31Q15323 416 aa10.23□□□□□ -0.77
SRP54-210ENST00000556380 EXOC3L4Q17RC7 722 aa10.23□□□□□ -0.77
SRP54-210ENST00000556380 SKOR2Q2VWA4 1001 aaPredicted RBP10.23□□□□□ -0.77
SRP54-210ENST00000556380 ZNF394Q53GI3 561 aa10.23□□□□□ -0.77
SRP54-210ENST00000556380 STXBP5Q5T5C0 1151 aa10.23□□□□□ -0.77
SRP54-210ENST00000556380 PPP1R26Q5T8A7 1209 aaPredicted RBP10.23□□□□□ -0.77
SRP54-210ENST00000556380 ARHGAP17Q68EM7 881 aa10.23□□□□□ -0.77
SRP54-210ENST00000556380 TANGO2Q6ICL3 276 aa10.23□□□□□ -0.77
SRP54-210ENST00000556380 DENND5BQ6ZUT9 1274 aa10.23□□□□□ -0.77
SRP54-210ENST00000556380 DHX40Q8IX18 779 aaKnown RBP10.23□□□□□ -0.77
SRP54-210ENST00000556380 PPM1KQ8N3J5 372 aa10.23□□□□□ -0.77
SRP54-210ENST00000556380 SLC44A3Q8N4M1 653 aa10.23□□□□□ -0.77
SRP54-210ENST00000556380 ST13P5Q8NFI4 369 aaPredicted RBP10.23□□□□□ -0.77
SRP54-210ENST00000556380 EDAQ92838 391 aa10.23□□□□□ -0.77
SRP54-210ENST00000556380 SMARCD1Q96GM5 515 aa10.23□□□□□ -0.77
SRP54-210ENST00000556380 HEXIM2Q96MH2 286 aaKnown RBP10.23□□□□□ -0.77
SRP54-210ENST00000556380 ASB16Q96NS5 453 aa10.23□□□□□ -0.77
SRP54-210ENST00000556380 SPSB2Q99619 263 aa10.23□□□□□ -0.77
SRP54-210ENST00000556380 ZSWIM1Q9BR11 485 aa10.23□□□□□ -0.77
SRP54-210ENST00000556380 DUSP16Q9BY84 665 aa10.23□□□□□ -0.77
SRP54-210ENST00000556380 ATXN3LQ9H3M9 355 aa10.23□□□□□ -0.77
SRP54-210ENST00000556380 SMOC2Q9H3U7 446 aa10.23□□□□□ -0.77
SRP54-210ENST00000556380 UBE2TQ9NPD8 197 aaPredicted RBP10.23□□□□□ -0.77
SRP54-210ENST00000556380 LIMA1Q9UHB6 759 aaKnown RBP10.23□□□□□ -0.77
SRP54-210ENST00000556380 NUMBLQ9Y6R0 609 aa10.23□□□□□ -0.77
SRP54-210ENST00000556380 TECTAO75443 2155 aa10.23□□□□□ -0.77
SRP54-210ENST00000556380 PTPRDP23468 1912 aa10.23□□□□□ -0.77
SRP54-210ENST00000556380 SYCE3A1L190 88 aa10.22□□□□□ -0.77
SRP54-210ENST00000556380 SOBPA7XYQ1 873 aa10.22□□□□□ -0.77
SRP54-210ENST00000556380 AP1G2O75843 785 aa10.22□□□□□ -0.77
SRP54-210ENST00000556380 PAEPP09466 180 aa10.22□□□□□ -0.77
SRP54-210ENST00000556380 ALADP13716 330 aa10.22□□□□□ -0.77
SRP54-210ENST00000556380 PRKCSHP14314 528 aaPredicted RBP10.22□□□□□ -0.77
SRP54-210ENST00000556380 CDC25CP30307 473 aa10.22□□□□□ -0.77
SRP54-210ENST00000556380 YWHAEP62258 255 aaKnown RBP10.22□□□□□ -0.77
SRP54-210ENST00000556380 TDGQ13569 410 aa10.22□□□□□ -0.77
SRP54-210ENST00000556380 NFKBIBQ15653 356 aa10.22□□□□□ -0.77
SRP54-210ENST00000556380 TAF12Q16514 161 aa10.22□□□□□ -0.77
SRP54-210ENST00000556380 ZSCAN23Q3MJ62 389 aa10.22□□□□□ -0.77
SRP54-210ENST00000556380 GJB7Q6PEY0 223 aa10.22□□□□□ -0.77
SRP54-210ENST00000556380 TMEM270Q6UE05 265 aa10.22□□□□□ -0.77
SRP54-210ENST00000556380 LIAT1Q6ZQX7 453 aa10.22□□□□□ -0.77
SRP54-210ENST00000556380 TRIM67Q6ZTA4 783 aa10.22□□□□□ -0.77
SRP54-210ENST00000556380 CLEC20AQ6ZU45 233 aa10.22□□□□□ -0.77
SRP54-210ENST00000556380 MON1AQ86VX9 555 aa10.22□□□□□ -0.77
SRP54-210ENST00000556380 NUP93Q8N1F7 819 aa10.22□□□□□ -0.77
SRP54-210ENST00000556380 SCAMP5Q8TAC9 235 aa10.22□□□□□ -0.77
SRP54-210ENST00000556380 TFAP2BQ92481 460 aa10.22□□□□□ -0.77
SRP54-210ENST00000556380 SMARCD2Q92925 531 aa10.22□□□□□ -0.77
SRP54-210ENST00000556380 RSPRY1Q96DX4 576 aa10.22□□□□□ -0.77
SRP54-210ENST00000556380 LRRC3BQ96PB8 259 aa10.22□□□□□ -0.77
SRP54-210ENST00000556380 MED10Q9BTT4 135 aa10.22□□□□□ -0.77
SRP54-210ENST00000556380 SLC46A2Q9BY10 475 aa10.22□□□□□ -0.77
SRP54-210ENST00000556380 PLA2G2FQ9BZM2 168 aa10.22□□□□□ -0.77
SRP54-210ENST00000556380 UBXN6Q9BZV1 441 aa10.22□□□□□ -0.77
SRP54-210ENST00000556380 GPR88Q9GZN0 384 aa10.22□□□□□ -0.77
SRP54-210ENST00000556380 NAT10Q9H0A0 1025 aaKnown RBP10.22□□□□□ -0.77
SRP54-210ENST00000556380 TASP1Q9H6P5 420 aa10.22□□□□□ -0.77
SRP54-210ENST00000556380 DMAP1Q9NPF5 467 aaPredicted RBP10.22□□□□□ -0.77
SRP54-210ENST00000556380 C11orf16Q9NQ32 467 aa10.22□□□□□ -0.77
SRP54-210ENST00000556380 KRT82Q9NSB4 513 aa10.22□□□□□ -0.77
SRP54-210ENST00000556380 TAB2Q9NYJ8 693 aa10.22□□□□□ -0.77
SRP54-210ENST00000556380 UXTQ9UBK9 157 aaPredicted RBP10.22□□□□□ -0.77
SRP54-210ENST00000556380 APEX2Q9UBZ4 518 aa10.22□□□□□ -0.77
SRP54-210ENST00000556380 AJAP1Q9UKB5 411 aaPredicted RBP10.22□□□□□ -0.77
SRP54-210ENST00000556380 KIAA1257Q9ULG3 409 aa10.22□□□□□ -0.77
SRP54-210ENST00000556380 MAGED2Q9UNF1 606 aaPredicted RBP10.22□□□□□ -0.77
SRP54-210ENST00000556380 SORCS3Q9UPU3 1222 aa10.22□□□□□ -0.77
SRP54-210ENST00000556380 ATP8B3O60423 1300 aa10.22□□□□□ -0.77
SRP54-210ENST00000556380 F5P12259 2224 aa10.21□□□□□ -0.77
SRP54-210ENST00000556380 ZNF840PA6NDX5 716 aa10.21□□□□□ -0.77
SRP54-210ENST00000556380 BECN2A8MW95 431 aa10.21□□□□□ -0.77
SRP54-210ENST00000556380 O00370 1275 aa10.21□□□□□ -0.77
SRP54-210ENST00000556380 ECI2O75521 394 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms