RNA–Protein interactions for RNA: ENST00000556082.5

ATXN3-235, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 660 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-235ENST00000556082 AMACRQ9UHK6 382 aa8.76□□□□□ -1.01
ATXN3-235ENST00000556082 FEZ2Q9UHY8 353 aaPredicted RBP8.76□□□□□ -1.01
ATXN3-235ENST00000556082 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.76□□□□□ -1.01
ATXN3-235ENST00000556082 UTP11Q9Y3A2 253 aaKnown RBP8.76□□□□□ -1.01
ATXN3-235ENST00000556082 NR2E1Q9Y466 385 aa8.76□□□□□ -1.01
ATXN3-235ENST00000556082 EVPLQ92817 2033 aa8.76□□□□□ -1.01
ATXN3-235ENST00000556082 SMIM28A0A1B0GU29 152 aa8.75□□□□□ -1.01
ATXN3-235ENST00000556082 MYADML2A6NDP7 307 aa8.75□□□□□ -1.01
ATXN3-235ENST00000556082 ADAMTS4O75173 837 aa8.75□□□□□ -1.01
ATXN3-235ENST00000556082 RECQL4O94761 1208 aa8.75□□□□□ -1.01
ATXN3-235ENST00000556082 C6orf222P0C671 652 aaPredicted RBP8.75□□□□□ -1.01
ATXN3-235ENST00000556082 SETSIPP0DME0 302 aa8.75□□□□□ -1.01
ATXN3-235ENST00000556082 RARAP10276 462 aa8.75□□□□□ -1.01
ATXN3-235ENST00000556082 CD19P15391 556 aa8.75□□□□□ -1.01
ATXN3-235ENST00000556082 FGFR4P22455 802 aa8.75□□□□□ -1.01
ATXN3-235ENST00000556082 PTPN7P35236 360 aa8.75□□□□□ -1.01
ATXN3-235ENST00000556082 HSPA9P38646 679 aaKnown RBP8.75□□□□□ -1.01
ATXN3-235ENST00000556082 CETN2P41208 172 aa8.75□□□□□ -1.01
ATXN3-235ENST00000556082 GPD2P43304 727 aa8.75□□□□□ -1.01
ATXN3-235ENST00000556082 ATP1A2P50993 1020 aa8.75□□□□□ -1.01
ATXN3-235ENST00000556082 NDST1P52848 882 aa8.75□□□□□ -1.01
ATXN3-235ENST00000556082 MRPS25P82663 173 aaKnown RBP8.75□□□□□ -1.01
ATXN3-235ENST00000556082 MRPS6P82932 125 aaKnown RBP8.75□□□□□ -1.01
ATXN3-235ENST00000556082 DR1Q01658 176 aa8.75□□□□□ -1.01
ATXN3-235ENST00000556082 ZNF394Q53GI3 561 aa8.75□□□□□ -1.01
ATXN3-235ENST00000556082 SGO2Q562F6 1265 aa8.75□□□□□ -1.01
ATXN3-235ENST00000556082 C9orf57Q5W0N0 161 aa8.75□□□□□ -1.01
ATXN3-235ENST00000556082 ARHGAP17Q68EM7 881 aa8.75□□□□□ -1.01
ATXN3-235ENST00000556082 DUPD1Q68J44 220 aa8.75□□□□□ -1.01
ATXN3-235ENST00000556082 CCSAPQ6IQ19 270 aaPredicted RBP8.75□□□□□ -1.01
ATXN3-235ENST00000556082 SYDE1Q6ZW31 735 aaPredicted RBP8.75□□□□□ -1.01
ATXN3-235ENST00000556082 SND1Q7KZF4 910 aaKnown RBP eCLIP8.75□□□□□ -1.01
ATXN3-235ENST00000556082 DPH6Q7L8W6 267 aa8.75□□□□□ -1.01
ATXN3-235ENST00000556082 ZDHHC14Q8IZN3 488 aa8.75□□□□□ -1.01
ATXN3-235ENST00000556082 IQCKQ8N0W5 287 aa8.75□□□□□ -1.01
ATXN3-235ENST00000556082 CRYBG2Q8N1P7 616 aa8.75□□□□□ -1.01
ATXN3-235ENST00000556082 FAM71BQ8TC56 605 aa8.75□□□□□ -1.01
ATXN3-235ENST00000556082 STK32AQ8WU08 396 aa8.75□□□□□ -1.01
ATXN3-235ENST00000556082 MAGOHBQ96A72 148 aaKnown RBP8.75□□□□□ -1.01
ATXN3-235ENST00000556082 MCRS1Q96EZ8 462 aa8.75□□□□□ -1.01
ATXN3-235ENST00000556082 HEXIM2Q96MH2 286 aaKnown RBP8.75□□□□□ -1.01
ATXN3-235ENST00000556082 TWNKQ96RR1 684 aa8.75□□□□□ -1.01
ATXN3-235ENST00000556082 TRAIPQ9BWF2 469 aa8.75□□□□□ -1.01
ATXN3-235ENST00000556082 TRIM7Q9C029 511 aa8.75□□□□□ -1.01
ATXN3-235ENST00000556082 TRIM6Q9C030 488 aaPredicted RBP8.75□□□□□ -1.01
ATXN3-235ENST00000556082 ZNF358Q9NW07 568 aa8.75□□□□□ -1.01
ATXN3-235ENST00000556082 MARK1Q9P0L2 795 aa8.75□□□□□ -1.01
ATXN3-235ENST00000556082 RASAL2Q9UJF2 1139 aa8.75□□□□□ -1.01
ATXN3-235ENST00000556082 NFU1Q9UMS0 254 aa8.75□□□□□ -1.01
ATXN3-235ENST00000556082 GABRQQ9UN88 632 aa8.75□□□□□ -1.01
ATXN3-235ENST00000556082 PIN4Q9Y237 131 aaKnown RBP8.75□□□□□ -1.01
ATXN3-235ENST00000556082 GINS2Q9Y248 185 aa8.75□□□□□ -1.01
ATXN3-235ENST00000556082 EFR3BQ9Y2G0 817 aa8.75□□□□□ -1.01
ATXN3-235ENST00000556082 TRPV2Q9Y5S1 764 aa8.75□□□□□ -1.01
ATXN3-235ENST00000556082 ANK1P16157 1881 aa8.74□□□□□ -1.01
ATXN3-235ENST00000556082 KRBA1A5PL33 1030 aa8.74□□□□□ -1.01
ATXN3-235ENST00000556082 M0QZ92 97 aa8.74□□□□□ -1.01
ATXN3-235ENST00000556082 KHNYNO15037 678 aaKnown RBP8.74□□□□□ -1.01
ATXN3-235ENST00000556082 TTI1O43156 1089 aa8.74□□□□□ -1.01
ATXN3-235ENST00000556082 ADAM23O75077 832 aa8.74□□□□□ -1.01
ATXN3-235ENST00000556082 CABYRO75952 493 aa8.74□□□□□ -1.01
ATXN3-235ENST00000556082 MICAL2O94851 1124 aa8.74□□□□□ -1.01
ATXN3-235ENST00000556082 KRT3P12035 628 aa8.74□□□□□ -1.01
ATXN3-235ENST00000556082 HOXD10P28358 340 aa8.74□□□□□ -1.01
ATXN3-235ENST00000556082 ECHS1P30084 290 aa8.74□□□□□ -1.01
ATXN3-235ENST00000556082 LRPAP1P30533 357 aa8.74□□□□□ -1.01
ATXN3-235ENST00000556082 COILP38432 576 aaPredicted RBP8.74□□□□□ -1.01
ATXN3-235ENST00000556082 TNNT3P45378 269 aaPredicted RBP8.74□□□□□ -1.01
ATXN3-235ENST00000556082 RAP1GAPP47736 663 aa8.74□□□□□ -1.01
ATXN3-235ENST00000556082 SNX16P57768 344 aa8.74□□□□□ -1.01
ATXN3-235ENST00000556082 RPL7AP62424 266 aaKnown RBP8.74□□□□□ -1.01
ATXN3-235ENST00000556082 SP3Q02447 781 aa8.74□□□□□ -1.01
ATXN3-235ENST00000556082 CACNB2Q08289 660 aaPredicted RBP8.74□□□□□ -1.01
ATXN3-235ENST00000556082 KLF1Q13351 362 aaPredicted RBP8.74□□□□□ -1.01
ATXN3-235ENST00000556082 PTPN20Q4JDL3 420 aa8.74□□□□□ -1.01
ATXN3-235ENST00000556082 HSP90B2PQ58FF3 399 aa8.74□□□□□ -1.01
ATXN3-235ENST00000556082 MAP3K21Q5TCX8 1036 aa8.74□□□□□ -1.01
ATXN3-235ENST00000556082 LLGL2Q6P1M3 1020 aa8.74□□□□□ -1.01
ATXN3-235ENST00000556082 DCUN1D2Q6PH85 259 aa8.74□□□□□ -1.01
ATXN3-235ENST00000556082 CXCL17Q6UXB2 119 aa8.74□□□□□ -1.01
ATXN3-235ENST00000556082 SCARA5Q6ZMJ2 495 aa8.74□□□□□ -1.01
ATXN3-235ENST00000556082 POLNQ7Z5Q5 900 aa8.74□□□□□ -1.01
ATXN3-235ENST00000556082 FAM228AQ86W67 206 aa8.74□□□□□ -1.01
ATXN3-235ENST00000556082 CPNE8Q86YQ8 564 aa8.74□□□□□ -1.01
ATXN3-235ENST00000556082 JAMLQ86YT9 394 aa8.74□□□□□ -1.01
ATXN3-235ENST00000556082 HACE1Q8IYU2 909 aa8.74□□□□□ -1.01
ATXN3-235ENST00000556082 PCSK9Q8NBP7 692 aaKnown RBP8.74□□□□□ -1.01
ATXN3-235ENST00000556082 SMG8Q8ND04 991 aaKnown RBP8.74□□□□□ -1.01
ATXN3-235ENST00000556082 IFT81Q8WYA0 676 aa8.74□□□□□ -1.01
ATXN3-235ENST00000556082 LRRC45Q96CN5 670 aa8.74□□□□□ -1.01
ATXN3-235ENST00000556082 RBM41Q96IZ5 413 aaKnown RBP8.74□□□□□ -1.01
ATXN3-235ENST00000556082 SENP6Q9GZR1 1112 aaPredicted RBP8.74□□□□□ -1.01
ATXN3-235ENST00000556082 NXF3Q9H4D5 531 aaKnown RBP8.74□□□□□ -1.01
ATXN3-235ENST00000556082 ERVK-5Q9HDB9 667 aa8.74□□□□□ -1.01
ATXN3-235ENST00000556082 DDX56Q9NY93 547 aaKnown RBP8.74□□□□□ -1.01
ATXN3-235ENST00000556082 PARP2Q9UGN5 583 aa8.74□□□□□ -1.01
ATXN3-235ENST00000556082 CYTH4Q9UIA0 394 aa8.74□□□□□ -1.01
ATXN3-235ENST00000556082 IPPQ9Y573 584 aa8.74□□□□□ -1.01
ATXN3-235ENST00000556082 SQORQ9Y6N5 450 aa8.74□□□□□ -1.01
ATXN3-235ENST00000556082 DOCK3Q8IZD9 2030 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms