RNA–Protein interactions for RNA: ENST00000555565.5

TDP1-212, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 524 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-212ENST00000555565 ANAPC1Q9H1A4 1944 aa11.56□□□□□ -0.56
TDP1-212ENST00000555565 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.56□□□□□ -0.56
TDP1-212ENST00000555565 CLIC2O15247 247 aa11.56□□□□□ -0.56
TDP1-212ENST00000555565 ATP2C2O75185 946 aa11.56□□□□□ -0.56
TDP1-212ENST00000555565 TADA3O75528 432 aa11.56□□□□□ -0.56
TDP1-212ENST00000555565 CST3P01034 146 aaPredicted RBP11.56□□□□□ -0.56
TDP1-212ENST00000555565 TNNC2P02585 160 aa11.56□□□□□ -0.56
TDP1-212ENST00000555565 CHRM1P11229 460 aaPredicted RBP11.56□□□□□ -0.56
TDP1-212ENST00000555565 HNRNPLP14866 589 aaKnown RBP eCLIP11.56□□□□□ -0.56
TDP1-212ENST00000555565 LMO2P25791 158 aa11.56□□□□□ -0.56
TDP1-212ENST00000555565 PCSK1P29120 753 aa11.56□□□□□ -0.56
TDP1-212ENST00000555565 ME1P48163 572 aa11.56□□□□□ -0.56
TDP1-212ENST00000555565 RPL10AP62906 217 aaKnown RBP11.56□□□□□ -0.56
TDP1-212ENST00000555565 SIM1P81133 766 aaPredicted RBP11.56□□□□□ -0.56
TDP1-212ENST00000555565 SNRNP35Q16560 246 aaKnown RBP11.56□□□□□ -0.56
TDP1-212ENST00000555565 CFAP221Q4G0U5 840 aa11.56□□□□□ -0.56
TDP1-212ENST00000555565 USP39Q53GS9 565 aaKnown RBP11.56□□□□□ -0.56
TDP1-212ENST00000555565 TRIM61Q5EBN2 209 aa11.56□□□□□ -0.56
TDP1-212ENST00000555565 RESP18Q5W5W9 173 aa11.56□□□□□ -0.56
TDP1-212ENST00000555565 TXNDC8Q6A555 127 aa11.56□□□□□ -0.56
TDP1-212ENST00000555565 ATL3Q6DD88 541 aa11.56□□□□□ -0.56
TDP1-212ENST00000555565 FAM171BQ6P995 826 aa11.56□□□□□ -0.56
TDP1-212ENST00000555565 TRAPPC11Q7Z392 1133 aa11.56□□□□□ -0.56
TDP1-212ENST00000555565 CYP2U1Q7Z449 544 aa11.56□□□□□ -0.56
TDP1-212ENST00000555565 RAB44Q7Z6P3 723 aaPredicted RBP11.56□□□□□ -0.56
TDP1-212ENST00000555565 C11orf74Q86VG3 221 aa11.56□□□□□ -0.56
TDP1-212ENST00000555565 NELFCDQ8IXH7 590 aa11.56□□□□□ -0.56
TDP1-212ENST00000555565 CHCHD4Q8N4Q1 142 aa11.56□□□□□ -0.56
TDP1-212ENST00000555565 FRMD1Q8N878 549 aa11.56□□□□□ -0.56
TDP1-212ENST00000555565 MAB21L3Q8N8X9 362 aa11.56□□□□□ -0.56
TDP1-212ENST00000555565 RDH13Q8NBN7 331 aa11.56□□□□□ -0.56
TDP1-212ENST00000555565 USP33Q8TEY7 942 aa11.56□□□□□ -0.56
TDP1-212ENST00000555565 PIGKQ92643 395 aa11.56□□□□□ -0.56
TDP1-212ENST00000555565 TRMT2BQ96GJ1 504 aaKnown RBP11.56□□□□□ -0.56
TDP1-212ENST00000555565 CNOT6LQ96LI5 555 aaKnown RBP11.56□□□□□ -0.56
TDP1-212ENST00000555565 MYRFLQ96LU7 910 aa11.56□□□□□ -0.56
TDP1-212ENST00000555565 FNBP1Q96RU3 617 aa11.56□□□□□ -0.56
TDP1-212ENST00000555565 GZF1Q9H116 711 aaPredicted RBP11.56□□□□□ -0.56
TDP1-212ENST00000555565 ECT2Q9H8V3 914 aa11.56□□□□□ -0.56
TDP1-212ENST00000555565 TDP1Q9NUW8 608 aa11.56□□□□□ -0.56
TDP1-212ENST00000555565 ZMYM5Q9UJ78 669 aa11.56□□□□□ -0.56
TDP1-212ENST00000555565 R3HCC1Q9Y3T6 440 aaKnown RBP11.56□□□□□ -0.56
TDP1-212ENST00000555565 PTPRDP23468 1912 aa11.56□□□□□ -0.56
TDP1-212ENST00000555565 UBE4BO95155 1302 aa11.56□□□□□ -0.56
TDP1-212ENST00000555565 KIAA1549LQ6ZVL6 1849 aa11.56□□□□□ -0.56
TDP1-212ENST00000555565 PVALEFA0A1B0GWK0 134 aa11.55□□□□□ -0.56
TDP1-212ENST00000555565 K7EQS6 105 aa11.55□□□□□ -0.56
TDP1-212ENST00000555565 NOL4O94818 638 aa11.55□□□□□ -0.56
TDP1-212ENST00000555565 DLATP10515 647 aaKnown RBP11.55□□□□□ -0.56
TDP1-212ENST00000555565 ENGP17813 658 aa11.55□□□□□ -0.56
TDP1-212ENST00000555565 DDX6P26196 483 aaKnown RBP eCLIP11.55□□□□□ -0.56
TDP1-212ENST00000555565 AVPR1AP37288 418 aa11.55□□□□□ -0.56
TDP1-212ENST00000555565 PTGER3P43115 390 aa11.55□□□□□ -0.56
TDP1-212ENST00000555565 AFMP43652 599 aa11.55□□□□□ -0.56
TDP1-212ENST00000555565 CYP2J2P51589 502 aa11.55□□□□□ -0.56
TDP1-212ENST00000555565 PSMC1P62191 440 aaKnown RBP11.55□□□□□ -0.56
TDP1-212ENST00000555565 AMPD2Q01433 879 aa11.55□□□□□ -0.56
TDP1-212ENST00000555565 DNM1Q05193 864 aaKnown RBP11.55□□□□□ -0.56
TDP1-212ENST00000555565 SCAPQ12770 1279 aa11.55□□□□□ -0.56
TDP1-212ENST00000555565 LMAN2Q12907 356 aa11.55□□□□□ -0.56
TDP1-212ENST00000555565 CUL4BQ13620 913 aa11.55□□□□□ -0.56
TDP1-212ENST00000555565 ZNF268Q14587 947 aaPredicted RBP11.55□□□□□ -0.56
TDP1-212ENST00000555565 PSMD6Q15008 389 aa11.55□□□□□ -0.56
TDP1-212ENST00000555565 PDGFRLQ15198 375 aa11.55□□□□□ -0.56
TDP1-212ENST00000555565 COL28A1Q2UY09 1125 aa11.55□□□□□ -0.56
TDP1-212ENST00000555565 PEAR1Q5VY43 1037 aaPredicted RBP11.55□□□□□ -0.56
TDP1-212ENST00000555565 SLC23A3Q6PIS1 610 aa11.55□□□□□ -0.56
TDP1-212ENST00000555565 MON1AQ86VX9 555 aa11.55□□□□□ -0.56
TDP1-212ENST00000555565 SPATA2LQ8IUW3 424 aaPredicted RBP11.55□□□□□ -0.56
TDP1-212ENST00000555565 SCN4BQ8IWT1 228 aa11.55□□□□□ -0.56
TDP1-212ENST00000555565 GRAMD1CQ8IYS0 662 aa11.55□□□□□ -0.56
TDP1-212ENST00000555565 XXYLT1Q8NBI6 393 aa11.55□□□□□ -0.56
TDP1-212ENST00000555565 SPRYD3Q8NCJ5 442 aa11.55□□□□□ -0.56
TDP1-212ENST00000555565 MDGA1Q8NFP4 955 aa11.55□□□□□ -0.56
TDP1-212ENST00000555565 TSTD1Q8NFU3 115 aa11.55□□□□□ -0.56
TDP1-212ENST00000555565 ZNF516Q92618 1163 aa11.55□□□□□ -0.56
TDP1-212ENST00000555565 MRPS31Q92665 395 aaKnown RBP11.55□□□□□ -0.56
TDP1-212ENST00000555565 CD101Q93033 1021 aa11.55□□□□□ -0.56
TDP1-212ENST00000555565 FUBP3Q96I24 572 aaKnown RBP eCLIP11.55□□□□□ -0.56
TDP1-212ENST00000555565 SYT15Q9BQS2 421 aa11.55□□□□□ -0.56
TDP1-212ENST00000555565 SLC32A1Q9H598 525 aa11.55□□□□□ -0.56
TDP1-212ENST00000555565 SLC39A2Q9NP94 309 aa11.55□□□□□ -0.56
TDP1-212ENST00000555565 CRTAC1Q9NQ79 661 aa11.55□□□□□ -0.56
TDP1-212ENST00000555565 FAM13BQ9NYF5 915 aa11.55□□□□□ -0.56
TDP1-212ENST00000555565 MBD1Q9UIS9 605 aaPredicted RBP11.55□□□□□ -0.56
TDP1-212ENST00000555565 RCOR1Q9UKL0 485 aa11.55□□□□□ -0.56
TDP1-212ENST00000555565 THADAQ6YHU6 1953 aa11.55□□□□□ -0.56
TDP1-212ENST00000555565 MYO16Q9Y6X6 1858 aa11.55□□□□□ -0.56
TDP1-212ENST00000555565 H0Y626 953 aa11.54□□□□□ -0.56
TDP1-212ENST00000555565 TNFRSF10BO14763 440 aa11.54□□□□□ -0.56
TDP1-212ENST00000555565 TRIM16O95361 564 aa11.54□□□□□ -0.56
TDP1-212ENST00000555565 PDGFRBP09619 1106 aa11.54□□□□□ -0.56
TDP1-212ENST00000555565 TNNI1P19237 187 aa11.54□□□□□ -0.56
TDP1-212ENST00000555565 WARSP23381 471 aaKnown RBP11.54□□□□□ -0.56
TDP1-212ENST00000555565 MAGEA11P43364 429 aa11.54□□□□□ -0.56
TDP1-212ENST00000555565 MAPK8P45983 427 aa11.54□□□□□ -0.56
TDP1-212ENST00000555565 DHPSP49366 369 aaPredicted RBP11.54□□□□□ -0.56
TDP1-212ENST00000555565 SNRPFP62306 86 aaKnown RBP11.54□□□□□ -0.56
TDP1-212ENST00000555565 CYP24A1Q07973 514 aa11.54□□□□□ -0.56
TDP1-212ENST00000555565 KNOP1Q1ED39 458 aaKnown RBP11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms