RNA–Protein interactions for RNA: ENST00000555301.1

CHD8-208, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 2

Gene CHD8, Length 918 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-208ENST00000555301 LRRC4Q9HBW1 653 aa15.07■□□□□ 0
CHD8-208ENST00000555301 CYLDQ9NQC7 956 aa15.07■□□□□ 0
CHD8-208ENST00000555301 AVENQ9NQS1 362 aaPredicted RBP15.07■□□□□ 0
CHD8-208ENST00000555301 DNMT3BQ9UBC3 853 aaKnown RBP15.07■□□□□ 0
CHD8-208ENST00000555301 MAGED2Q9UNF1 606 aaPredicted RBP15.07■□□□□ 0
CHD8-208ENST00000555301 ATG2AQ2TAZ0 1938 aa15.07■□□□□ 0
CHD8-208ENST00000555301 TULP2O00295 520 aa15.06■□□□□ 0
CHD8-208ENST00000555301 ZNF197O14709 1029 aa15.06■□□□□ 0
CHD8-208ENST00000555301 RHOP08100 348 aa15.06■□□□□ 0
CHD8-208ENST00000555301 CHRNB2P17787 502 aa15.06■□□□□ 0
CHD8-208ENST00000555301 TNFAIP3P21580 790 aa15.06■□□□□ 0
CHD8-208ENST00000555301 KIF11P52732 1056 aa15.06■□□□□ 0
CHD8-208ENST00000555301 EPHA5P54756 1037 aa15.06■□□□□ 0
CHD8-208ENST00000555301 SMAD4Q13485 552 aaKnown RBP15.06■□□□□ 0
CHD8-208ENST00000555301 MTMR3Q13615 1198 aa15.06■□□□□ 0
CHD8-208ENST00000555301 CLUL1Q15846 466 aa15.06■□□□□ 0
CHD8-208ENST00000555301 PUS10Q3MIT2 529 aaKnown RBP15.06■□□□□ 0
CHD8-208ENST00000555301 LEXMQ3ZCV2 418 aa15.06■□□□□ 0
CHD8-208ENST00000555301 HGSNATQ68CP4 663 aa15.06■□□□□ 0
CHD8-208ENST00000555301 PMF1Q6P1K2 205 aa15.06■□□□□ 0
CHD8-208ENST00000555301 TMC8Q8IU68 726 aa15.06■□□□□ 0
CHD8-208ENST00000555301 SIX6OS1Q8N1H7 587 aa15.06■□□□□ 0
CHD8-208ENST00000555301 MSANTD4Q8NCY6 345 aa15.06■□□□□ 0
CHD8-208ENST00000555301 C1orf131Q8NDD1 294 aaKnown RBP15.06■□□□□ 0
CHD8-208ENST00000555301 SLITRK1Q96PX8 696 aa15.06■□□□□ 0
CHD8-208ENST00000555301 GCNAQ96QF7 691 aa15.06■□□□□ 0
CHD8-208ENST00000555301 WDR6Q9NNW5 1121 aaKnown RBP15.06■□□□□ 0
CHD8-208ENST00000555301 ST7Q9NRC1 585 aa15.06■□□□□ 0
CHD8-208ENST00000555301 SEPT11Q9NVA2 429 aaKnown RBP15.06■□□□□ 0
CHD8-208ENST00000555301 HCFC1R1Q9NWW0 138 aa15.06■□□□□ 0
CHD8-208ENST00000555301 IL37Q9NZH6 218 aa15.06■□□□□ 0
CHD8-208ENST00000555301 USP3Q9Y6I4 520 aa15.06■□□□□ 0
CHD8-208ENST00000555301 MYO7AQ13402 2215 aa15.05■□□□□ 0
CHD8-208ENST00000555301 FAM92AA1XBS5 289 aa15.05■□□□□ -0
CHD8-208ENST00000555301 CYP1A1P04798 512 aaPredicted RBP15.05■□□□□ -0
CHD8-208ENST00000555301 SKILP12757 684 aa15.05■□□□□ -0
CHD8-208ENST00000555301 CDC25CP30307 473 aa15.05■□□□□ -0
CHD8-208ENST00000555301 PPP3CCP48454 512 aa15.05■□□□□ -0
CHD8-208ENST00000555301 RPL34P49207 117 aaKnown RBP15.05■□□□□ -0
CHD8-208ENST00000555301 RGS7P49802 495 aa15.05■□□□□ -0
CHD8-208ENST00000555301 TKTL1P51854 596 aa15.05■□□□□ -0
CHD8-208ENST00000555301 NOMO3P69849 1222 aa15.05■□□□□ -0
CHD8-208ENST00000555301 IFRD2Q12894 506 aaPredicted RBP15.05■□□□□ -0
CHD8-208ENST00000555301 PDCLQ13371 301 aa15.05■□□□□ -0
CHD8-208ENST00000555301 PPP1R2P3Q6NXS1 205 aa15.05■□□□□ -0
CHD8-208ENST00000555301 GPRIN1Q7Z2K8 1008 aa15.05■□□□□ -0
CHD8-208ENST00000555301 ZNF571Q7Z3V5 609 aaPredicted RBP15.05■□□□□ -0
CHD8-208ENST00000555301 TMEM110Q86TL2 294 aa15.05■□□□□ -0
CHD8-208ENST00000555301 WDTC1Q8N5D0 677 aa15.05■□□□□ -0
CHD8-208ENST00000555301 TC2NQ8N9U0 490 aa15.05■□□□□ -0
CHD8-208ENST00000555301 SPC24Q8NBT2 197 aa15.05■□□□□ -0
CHD8-208ENST00000555301 STKLD1Q8NE28 680 aa15.05■□□□□ -0
CHD8-208ENST00000555301 PDZD8Q8NEN9 1154 aa15.05■□□□□ -0
CHD8-208ENST00000555301 SCAMP5Q8TAC9 235 aa15.05■□□□□ -0
CHD8-208ENST00000555301 IPO4Q8TEX9 1081 aaKnown RBP15.05■□□□□ -0
CHD8-208ENST00000555301 OVCA2Q8WZ82 227 aa15.05■□□□□ -0
CHD8-208ENST00000555301 SUSD6Q92537 303 aa15.05■□□□□ -0
CHD8-208ENST00000555301 SYT11Q9BT88 431 aa15.05■□□□□ -0
CHD8-208ENST00000555301 SLC4A5Q9BY07 1137 aa15.05■□□□□ -0
CHD8-208ENST00000555301 LRRC3Q9BY71 257 aa15.05■□□□□ -0
CHD8-208ENST00000555301 MIS12Q9H081 205 aa15.05■□□□□ -0
CHD8-208ENST00000555301 CNGB3Q9NQW8 809 aa15.05■□□□□ -0
CHD8-208ENST00000555301 FAM50BQ9Y247 325 aa15.05■□□□□ -0
CHD8-208ENST00000555301 USP15Q9Y4E8 981 aaPredicted RBP15.05■□□□□ -0
CHD8-208ENST00000555301 PLXNA3P51805 1871 aa15.05■□□□□ -0
CHD8-208ENST00000555301 MYO9BQ13459 2157 aa15.05■□□□□ -0
CHD8-208ENST00000555301 CLUHO75153 1309 aa15.04■□□□□ -0
CHD8-208ENST00000555301 MBTPS2O43462 519 aa15.04■□□□□ -0
CHD8-208ENST00000555301 FBXO21O94952 628 aa15.04■□□□□ -0
CHD8-208ENST00000555301 MYL4P12829 197 aa15.04■□□□□ -0
CHD8-208ENST00000555301 GABRR2P28476 465 aa15.04■□□□□ -0
CHD8-208ENST00000555301 USP46P62068 366 aa15.04■□□□□ -0
CHD8-208ENST00000555301 CDK17Q00537 523 aa15.04■□□□□ -0
CHD8-208ENST00000555301 GOLGA8FQ08AF8 430 aa15.04■□□□□ -0
CHD8-208ENST00000555301 GOLGA8DPQ0D2H9 430 aa15.04■□□□□ -0
CHD8-208ENST00000555301 ADIGQ0VDE8 80 aa15.04■□□□□ -0
CHD8-208ENST00000555301 TAF10Q12962 218 aa15.04■□□□□ -0
CHD8-208ENST00000555301 CBX2Q14781 532 aaPredicted RBP15.04■□□□□ -0
CHD8-208ENST00000555301 AAK1Q2M2I8 961 aa15.04■□□□□ -0
CHD8-208ENST00000555301 NAA35Q5VZE5 725 aa15.04■□□□□ -0
CHD8-208ENST00000555301 WDR59Q6PJI9 974 aa15.04■□□□□ -0
CHD8-208ENST00000555301 CCDC186Q7Z3E2 898 aa15.04■□□□□ -0
CHD8-208ENST00000555301 HS6ST3Q8IZP7 471 aa15.04■□□□□ -0
CHD8-208ENST00000555301 SCML4Q8N228 414 aa15.04■□□□□ -0
CHD8-208ENST00000555301 FBXO32Q969P5 355 aa15.04■□□□□ -0
CHD8-208ENST00000555301 PPP1R13BQ96KQ4 1090 aa15.04■□□□□ -0
CHD8-208ENST00000555301 PANX2Q96RD6 677 aa15.04■□□□□ -0
CHD8-208ENST00000555301 PCDHB18PQ96TA0 734 aa15.04■□□□□ -0
CHD8-208ENST00000555301 SYNCQ9H7C4 482 aa15.04■□□□□ -0
CHD8-208ENST00000555301 IL21Q9HBE4 155 aa15.04■□□□□ -0
CHD8-208ENST00000555301 ZNF334Q9HCZ1 680 aaPredicted RBP15.04■□□□□ -0
CHD8-208ENST00000555301 TRPM5Q9NZQ8 1165 aa15.04■□□□□ -0
CHD8-208ENST00000555301 THEGQ9P2T0 379 aa15.04■□□□□ -0
CHD8-208ENST00000555301 CYTH4Q9UIA0 394 aa15.04■□□□□ -0
CHD8-208ENST00000555301 SCML2Q9UQR0 700 aa15.04■□□□□ -0
CHD8-208ENST00000555301 MRPS23Q9Y3D9 190 aaKnown RBP15.04■□□□□ -0
CHD8-208ENST00000555301 NCANO14594 1321 aa15.03■□□□□ -0
CHD8-208ENST00000555301 SSU72P8A0A1W2PR75 194 aa15.03■□□□□ -0
CHD8-208ENST00000555301 SART1O43290 800 aaKnown RBP15.03■□□□□ -0
CHD8-208ENST00000555301 ZBED1O96006 694 aa15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms