RNA–Protein interactions for RNA: ENST00000555235.1

MARK3-209, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 2

Gene MARK3, Length 2,282 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-209ENST00000555235 RMDN3Q96TC7 470 aa16.71■□□□□ 0.27
MARK3-209ENST00000555235 GMLQ99445 158 aa16.71■□□□□ 0.27
MARK3-209ENST00000555235 APOBEC3GQ9HC16 384 aaKnown RBP16.71■□□□□ 0.27
MARK3-209ENST00000555235 XPNPEP1Q9NQW7 623 aa16.71■□□□□ 0.27
MARK3-209ENST00000555235 ARHGAP28Q9P2N2 729 aa16.71■□□□□ 0.27
MARK3-209ENST00000555235 PPARGC1AQ9UBK2 798 aaKnown RBP16.71■□□□□ 0.27
MARK3-209ENST00000555235 GABBR1Q9UBS5 961 aa16.71■□□□□ 0.27
MARK3-209ENST00000555235 SRCAPQ6ZRS2 3230 aa16.7■□□□□ 0.26
MARK3-209ENST00000555235 INHBAP08476 426 aa16.7■□□□□ 0.26
MARK3-209ENST00000555235 PIM1P11309 404 aaPredicted RBP16.7■□□□□ 0.26
MARK3-209ENST00000555235 CHRNA5P30532 468 aa16.7■□□□□ 0.26
MARK3-209ENST00000555235 CDKN2BP42772 138 aa16.7■□□□□ 0.26
MARK3-209ENST00000555235 CUL2Q13617 745 aa16.7■□□□□ 0.26
MARK3-209ENST00000555235 FKBP1CQ5VVH2 108 aa16.7■□□□□ 0.26
MARK3-209ENST00000555235 ANKRD22Q5VYY1 191 aa16.7■□□□□ 0.26
MARK3-209ENST00000555235 ATG16L1Q676U5 607 aa16.7■□□□□ 0.26
MARK3-209ENST00000555235 LCA5Q86VQ0 697 aa16.7■□□□□ 0.26
MARK3-209ENST00000555235 TREML1Q86YW5 311 aa16.7■□□□□ 0.26
MARK3-209ENST00000555235 OR6Y1Q8NGX8 325 aa16.7■□□□□ 0.26
MARK3-209ENST00000555235 SERAC1Q96JX3 654 aa16.7■□□□□ 0.26
MARK3-209ENST00000555235 WDR83Q9BRX9 315 aaKnown RBP16.7■□□□□ 0.26
MARK3-209ENST00000555235 GINM1Q9NU53 330 aa16.7■□□□□ 0.26
MARK3-209ENST00000555235 PGAP2Q9UHJ9 254 aa16.7■□□□□ 0.26
MARK3-209ENST00000555235 PCDHB4Q9Y5E5 795 aa16.7■□□□□ 0.26
MARK3-209ENST00000555235 PTPRJQ12913 1337 aa16.7■□□□□ 0.26
MARK3-209ENST00000555235 TESPA1A2RU30 521 aaPredicted RBP16.7■□□□□ 0.26
MARK3-209ENST00000555235 TMEM191CA6NGB0 347 aa16.7■□□□□ 0.26
MARK3-209ENST00000555235 RNASEH1O60930 286 aaKnown RBP16.7■□□□□ 0.26
MARK3-209ENST00000555235 PIAS1O75925 651 aa16.7■□□□□ 0.26
MARK3-209ENST00000555235 TMEM191BP0C7N4 346 aa16.7■□□□□ 0.26
MARK3-209ENST00000555235 TNNI1P19237 187 aa16.7■□□□□ 0.26
MARK3-209ENST00000555235 SSTR3P32745 418 aaPredicted RBP16.7■□□□□ 0.26
MARK3-209ENST00000555235 XIAPP98170 497 aa16.7■□□□□ 0.26
MARK3-209ENST00000555235 MED21Q13503 144 aa16.7■□□□□ 0.26
MARK3-209ENST00000555235 MAP7Q14244 749 aa16.7■□□□□ 0.26
MARK3-209ENST00000555235 BBS9Q3SYG4 887 aa16.7■□□□□ 0.26
MARK3-209ENST00000555235 SH2D5Q6ZV89 423 aa16.7■□□□□ 0.26
MARK3-209ENST00000555235 SLC44A1Q8WWI5 657 aa16.7■□□□□ 0.26
MARK3-209ENST00000555235 NDUFA13Q9P0J0 144 aa16.7■□□□□ 0.26
MARK3-209ENST00000555235 CNTN6Q9UQ52 1028 aa16.7■□□□□ 0.26
MARK3-209ENST00000555235 PPME1Q9Y570 386 aa16.7■□□□□ 0.26
MARK3-209ENST00000555235 SMIM31A0A1B0GVY4 71 aa16.69■□□□□ 0.26
MARK3-209ENST00000555235 BUD23O43709 281 aaKnown RBP16.69■□□□□ 0.26
MARK3-209ENST00000555235 TCF4P15884 667 aa16.69■□□□□ 0.26
MARK3-209ENST00000555235 RPL7AP62424 266 aaKnown RBP16.69■□□□□ 0.26
MARK3-209ENST00000555235 ZNF200P98182 395 aaPredicted RBP16.69■□□□□ 0.26
MARK3-209ENST00000555235 MAP3K10Q02779 954 aa16.69■□□□□ 0.26
MARK3-209ENST00000555235 GAD2Q05329 585 aa16.69■□□□□ 0.26
MARK3-209ENST00000555235 ASPHQ12797 758 aa16.69■□□□□ 0.26
MARK3-209ENST00000555235 TMEM270Q6UE05 265 aa16.69■□□□□ 0.26
MARK3-209ENST00000555235 PDSS2Q86YH6 399 aa16.69■□□□□ 0.26
MARK3-209ENST00000555235 TTC13Q8NBP0 860 aa16.69■□□□□ 0.26
MARK3-209ENST00000555235 MCPH1Q8NEM0 835 aa16.69■□□□□ 0.26
MARK3-209ENST00000555235 PIP4K2CQ8TBX8 421 aa16.69■□□□□ 0.26
MARK3-209ENST00000555235 PPM1HQ9ULR3 514 aa16.69■□□□□ 0.26
MARK3-209ENST00000555235 ZNRF3Q9ULT6 936 aa16.69■□□□□ 0.26
MARK3-209ENST00000555235 EFR3BQ9Y2G0 817 aa16.69■□□□□ 0.26
MARK3-209ENST00000555235 COPEO14579 308 aa16.68■□□□□ 0.26
MARK3-209ENST00000555235 SPAG6O75602 509 aa16.68■□□□□ 0.26
MARK3-209ENST00000555235 DGAT1O75907 488 aa16.68■□□□□ 0.26
MARK3-209ENST00000555235 PYGBP11216 843 aa16.68■□□□□ 0.26
MARK3-209ENST00000555235 STIP1P31948 543 aaKnown RBP16.68■□□□□ 0.26
MARK3-209ENST00000555235 NLRP11P59045 1033 aaKnown RBP16.68■□□□□ 0.26
MARK3-209ENST00000555235 KDSRQ06136 332 aa16.68■□□□□ 0.26
MARK3-209ENST00000555235 DHDDSQ86SQ9 333 aa16.68■□□□□ 0.26
MARK3-209ENST00000555235 PRPF39Q86UA1 669 aaKnown RBP16.68■□□□□ 0.26
MARK3-209ENST00000555235 RASSF3Q86WH2 238 aa16.68■□□□□ 0.26
MARK3-209ENST00000555235 FBXO27Q8NI29 283 aa16.68■□□□□ 0.26
MARK3-209ENST00000555235 FAM172AQ8WUF8 416 aa16.68■□□□□ 0.26
MARK3-209ENST00000555235 NAT14Q8WUY8 206 aa16.68■□□□□ 0.26
MARK3-209ENST00000555235 EBF3Q9H4W6 596 aa16.68■□□□□ 0.26
MARK3-209ENST00000555235 STYXL1Q9Y6J8 313 aa16.68■□□□□ 0.26
MARK3-209ENST00000555235 E5RJQ4 531 aa16.68■□□□□ 0.26
MARK3-209ENST00000555235 OPHN1O60890 802 aa16.68■□□□□ 0.26
MARK3-209ENST00000555235 LIG4P49917 911 aa16.68■□□□□ 0.26
MARK3-209ENST00000555235 RPL26P61254 145 aaKnown RBP16.68■□□□□ 0.26
MARK3-209ENST00000555235 GRM2Q14416 872 aa16.68■□□□□ 0.26
MARK3-209ENST00000555235 PIGHQ14442 188 aaPredicted RBP16.68■□□□□ 0.26
MARK3-209ENST00000555235 ARHGEF16Q5VV41 709 aa16.68■□□□□ 0.26
MARK3-209ENST00000555235 FAM83AQ86UY5 434 aa16.68■□□□□ 0.26
MARK3-209ENST00000555235 RSAD2Q8WXG1 361 aa16.68■□□□□ 0.26
MARK3-209ENST00000555235 ATP6V0A1Q93050 837 aa16.68■□□□□ 0.26
MARK3-209ENST00000555235 CLPTM1LQ96KA5 538 aa16.68■□□□□ 0.26
MARK3-209ENST00000555235 SRPK1Q96SB4 655 aaKnown RBP16.68■□□□□ 0.26
MARK3-209ENST00000555235 CHCHD3Q9NX63 227 aaKnown RBP16.68■□□□□ 0.26
MARK3-209ENST00000555235 SORCS3Q9UPU3 1222 aa16.68■□□□□ 0.26
MARK3-209ENST00000555235 H0YCG3 227 aa16.67■□□□□ 0.26
MARK3-209ENST00000555235 FAM155BO75949 473 aa16.67■□□□□ 0.26
MARK3-209ENST00000555235 CALB1P05937 261 aa16.67■□□□□ 0.26
MARK3-209ENST00000555235 MMP8P22894 467 aa16.67■□□□□ 0.26
MARK3-209ENST00000555235 FAAP100Q0VG06 881 aa16.67■□□□□ 0.26
MARK3-209ENST00000555235 HIC1Q14526 733 aa16.67■□□□□ 0.26
MARK3-209ENST00000555235 RAPH1Q70E73 1250 aa16.67■□□□□ 0.26
MARK3-209ENST00000555235 ARID3BQ8IVW6 561 aaPredicted RBP16.67■□□□□ 0.26
MARK3-209ENST00000555235 FLAD1Q8NFF5 587 aa16.67■□□□□ 0.26
MARK3-209ENST00000555235 LPAR1Q92633 364 aa16.67■□□□□ 0.26
MARK3-209ENST00000555235 CCDC106Q9BWC9 280 aa16.67■□□□□ 0.26
MARK3-209ENST00000555235 POLR3FQ9H1D9 316 aaPredicted RBP16.67■□□□□ 0.26
MARK3-209ENST00000555235 EPB41L1Q9H4G0 881 aa16.67■□□□□ 0.26
MARK3-209ENST00000555235 S100A14Q9HCY8 104 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms