RNA–Protein interactions for RNA: ENST00000555172.5

KTN1-220, Transcript of kinectin 1, humanhuman

TSL 2

Gene KTN1, Length 1,985 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KTN1-220ENST00000555172 CLPTM1LQ96KA5 538 aa4.17□□□□□ -1.74
KTN1-220ENST00000555172 CABS1Q96KC9 395 aa4.17□□□□□ -1.74
KTN1-220ENST00000555172 GBP4Q96PP9 640 aa4.17□□□□□ -1.74
KTN1-220ENST00000555172 PPP1R9BQ96SB3 815 aa4.17□□□□□ -1.74
KTN1-220ENST00000555172 REEP2Q9BRK0 252 aa4.17□□□□□ -1.74
KTN1-220ENST00000555172 NTPCRQ9BSD7 190 aaKnown RBP4.17□□□□□ -1.74
KTN1-220ENST00000555172 TRIM5Q9C035 493 aa4.17□□□□□ -1.74
KTN1-220ENST00000555172 SLC6A17Q9H1V8 727 aa4.17□□□□□ -1.74
KTN1-220ENST00000555172 SYNCQ9H7C4 482 aa4.17□□□□□ -1.74
KTN1-220ENST00000555172 IL21RQ9HBE5 538 aa4.17□□□□□ -1.74
KTN1-220ENST00000555172 NECTIN3Q9NQS3 549 aa4.17□□□□□ -1.74
KTN1-220ENST00000555172 MCM9Q9NXL9 1143 aa4.17□□□□□ -1.74
KTN1-220ENST00000555172 POGKQ9P215 609 aa4.17□□□□□ -1.74
KTN1-220ENST00000555172 SCOCQ9UIL1 159 aa4.17□□□□□ -1.74
KTN1-220ENST00000555172 DAPP1Q9UN19 280 aa4.17□□□□□ -1.74
KTN1-220ENST00000555172 TBC1D30Q9Y2I9 924 aa4.17□□□□□ -1.74
KTN1-220ENST00000555172 SIT1Q9Y3P8 196 aa4.17□□□□□ -1.74
KTN1-220ENST00000555172 USP15Q9Y4E8 981 aaPredicted RBP4.17□□□□□ -1.74
KTN1-220ENST00000555172 ST20-MTHFSA0A0A6YYL1 179 aa4.16□□□□□ -1.74
KTN1-220ENST00000555172 TCRBV5S2A0A599 114 aa4.16□□□□□ -1.74
KTN1-220ENST00000555172 SLC16A6O15403 523 aa4.16□□□□□ -1.74
KTN1-220ENST00000555172 DNPH1O43598 174 aa4.16□□□□□ -1.74
KTN1-220ENST00000555172 PEX10O60683 326 aa4.16□□□□□ -1.74
KTN1-220ENST00000555172 PFKMP08237 780 aa4.16□□□□□ -1.74
KTN1-220ENST00000555172 MMEP08473 750 aa4.16□□□□□ -1.74
KTN1-220ENST00000555172 SNRNP70P08621 437 aaKnown RBP4.16□□□□□ -1.74
KTN1-220ENST00000555172 DBHP09172 617 aa4.16□□□□□ -1.74
KTN1-220ENST00000555172 LAMP2P13473 410 aa4.16□□□□□ -1.74
KTN1-220ENST00000555172 GAP43P17677 238 aa4.16□□□□□ -1.74
KTN1-220ENST00000555172 ALDH3A2P51648 485 aa4.16□□□□□ -1.74
KTN1-220ENST00000555172 AP2B1P63010 937 aa4.16□□□□□ -1.74
KTN1-220ENST00000555172 SLC14A1Q13336 389 aa4.16□□□□□ -1.74
KTN1-220ENST00000555172 SNAPC2Q13487 334 aa4.16□□□□□ -1.74
KTN1-220ENST00000555172 MAMLD1Q13495 774 aa4.16□□□□□ -1.74
KTN1-220ENST00000555172 NR1I3Q14994 352 aa4.16□□□□□ -1.74
KTN1-220ENST00000555172 NAA25Q14CX7 972 aa4.16□□□□□ -1.74
KTN1-220ENST00000555172 NOMO1Q15155 1222 aa4.16□□□□□ -1.74
KTN1-220ENST00000555172 ZXDCQ2QGD7 858 aaPredicted RBP4.16□□□□□ -1.74
KTN1-220ENST00000555172 BTBD16Q32M84 506 aa4.16□□□□□ -1.74
KTN1-220ENST00000555172 MAJINQ3KP22 176 aa4.16□□□□□ -1.74
KTN1-220ENST00000555172 TTC38Q5R3I4 469 aa4.16□□□□□ -1.74
KTN1-220ENST00000555172 PRAMEF14Q5SWL7 426 aa4.16□□□□□ -1.74
KTN1-220ENST00000555172 TMTC4Q5T4D3 741 aa4.16□□□□□ -1.74
KTN1-220ENST00000555172 FAM69AQ5T7M9 428 aa4.16□□□□□ -1.74
KTN1-220ENST00000555172 IRGCQ6NXR0 463 aa4.16□□□□□ -1.74
KTN1-220ENST00000555172 CAVIN1Q6NZI2 390 aaKnown RBP4.16□□□□□ -1.74
KTN1-220ENST00000555172 CRTC1Q6UUV9 634 aa4.16□□□□□ -1.74
KTN1-220ENST00000555172 IKBIPQ70UQ0 350 aa4.16□□□□□ -1.74
KTN1-220ENST00000555172 GATAD2AQ86YP4 633 aa4.16□□□□□ -1.74
KTN1-220ENST00000555172 C3orf20Q8ND61 904 aa4.16□□□□□ -1.74
KTN1-220ENST00000555172 ASB15Q8WXK1 588 aa4.16□□□□□ -1.74
KTN1-220ENST00000555172 TBC1D5Q92609 795 aa4.16□□□□□ -1.74
KTN1-220ENST00000555172 PTP4A1Q93096 173 aa4.16□□□□□ -1.74
KTN1-220ENST00000555172 EID2BQ96D98 161 aa4.16□□□□□ -1.74
KTN1-220ENST00000555172 MAML3Q96JK9 1138 aa4.16□□□□□ -1.74
KTN1-220ENST00000555172 AK8Q96MA6 479 aa4.16□□□□□ -1.74
KTN1-220ENST00000555172 TUBGCP5Q96RT8 1024 aa4.16□□□□□ -1.74
KTN1-220ENST00000555172 ABHD1Q96SE0 405 aa4.16□□□□□ -1.74
KTN1-220ENST00000555172 TRIM54Q9BYV2 358 aa4.16□□□□□ -1.74
KTN1-220ENST00000555172 ZCWPW1Q9H0M4 648 aa4.16□□□□□ -1.74
KTN1-220ENST00000555172 WNT8AQ9H1J5 351 aa4.16□□□□□ -1.74
KTN1-220ENST00000555172 RMI1Q9H9A7 625 aa4.16□□□□□ -1.74
KTN1-220ENST00000555172 NIPSNAP3AQ9UFN0 247 aaPredicted RBP4.16□□□□□ -1.74
KTN1-220ENST00000555172 SRRDQ9UH36 339 aa4.16□□□□□ -1.74
KTN1-220ENST00000555172 DNAJC16Q9Y2G8 782 aa4.16□□□□□ -1.74
KTN1-220ENST00000555172 YBX2Q9Y2T7 364 aaKnown RBP4.16□□□□□ -1.74
KTN1-220ENST00000555172 MTO1Q9Y2Z2 717 aaKnown RBP4.16□□□□□ -1.74
KTN1-220ENST00000555172 ASB1Q9Y576 335 aa4.16□□□□□ -1.74
KTN1-220ENST00000555172 CDY2AQ9Y6F7 541 aa4.16□□□□□ -1.74
KTN1-220ENST00000555172 A0A0U1RQK1 487 aa4.16□□□□□ -1.74
KTN1-220ENST00000555172 ZC3H12DA2A288 527 aaKnown RBP4.16□□□□□ -1.74
KTN1-220ENST00000555172 ZNF320A2RRD8 509 aa4.16□□□□□ -1.74
KTN1-220ENST00000555172 TRIM43BA6NCK2 446 aa4.16□□□□□ -1.74
KTN1-220ENST00000555172 KRT87PA6NCN2 255 aa4.16□□□□□ -1.74
KTN1-220ENST00000555172 CLCA1A8K7I4 914 aa4.16□□□□□ -1.74
KTN1-220ENST00000555172 TMEM110-MUSTN1A8MSY1 372 aa4.16□□□□□ -1.74
KTN1-220ENST00000555172 H0YAE9 185 aa4.16□□□□□ -1.74
KTN1-220ENST00000555172 DDX39AO00148 427 aaKnown RBP4.16□□□□□ -1.74
KTN1-220ENST00000555172 KERAO60938 352 aa4.16□□□□□ -1.74
KTN1-220ENST00000555172 PLATP00750 562 aa4.16□□□□□ -1.74
KTN1-220ENST00000555172 CLEC3BP05452 202 aa4.16□□□□□ -1.74
KTN1-220ENST00000555172 KLRK1P26718 216 aa4.16□□□□□ -1.74
KTN1-220ENST00000555172 TM4SF1P30408 202 aa4.16□□□□□ -1.74
KTN1-220ENST00000555172 ARL3P36405 182 aa4.16□□□□□ -1.74
KTN1-220ENST00000555172 THPOP40225 353 aa4.16□□□□□ -1.74
KTN1-220ENST00000555172 GARSP41250 739 aaKnown RBP4.16□□□□□ -1.74
KTN1-220ENST00000555172 WASP42768 502 aa4.16□□□□□ -1.74
KTN1-220ENST00000555172 AARSP49588 968 aaKnown RBP eCLIP4.16□□□□□ -1.742e-6■□□□□ 10.9
KTN1-220ENST00000555172 CARSP49589 748 aaKnown RBP4.16□□□□□ -1.74
KTN1-220ENST00000555172 RAD23AP54725 363 aa4.16□□□□□ -1.74
KTN1-220ENST00000555172 EPHB3P54753 998 aa4.16□□□□□ -1.74
KTN1-220ENST00000555172 AKAP17AQ02040 695 aaKnown RBP4.16□□□□□ -1.74
KTN1-220ENST00000555172 EXOSC9Q06265 439 aaKnown RBP4.16□□□□□ -1.74
KTN1-220ENST00000555172 TFCP2Q12800 502 aa4.16□□□□□ -1.74
KTN1-220ENST00000555172 AIMP1Q12904 312 aaKnown RBP4.16□□□□□ -1.74
KTN1-220ENST00000555172 BFSP1Q12934 665 aa4.16□□□□□ -1.74
KTN1-220ENST00000555172 TARDBPQ13148 414 aaKnown RBP eCLIP4.16□□□□□ -1.74
KTN1-220ENST00000555172 SLC13A2Q13183 592 aa4.16□□□□□ -1.74
KTN1-220ENST00000555172 MPP3Q13368 585 aa4.16□□□□□ -1.74
KTN1-220ENST00000555172 PUM1Q14671 1186 aaKnown RBP eCLIP4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms