RNA–Protein interactions for RNA: ENST00000554879.5

PCNX1-209, Transcript of pecanex 1, humanhuman

TSL 1 (best)

Gene PCNX1, Length 4,431 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-209ENST00000554879 COG7P83436 770 aa17.32■□□□□ 0.36
PCNX1-209ENST00000554879 TAP1Q03518 808 aa17.32■□□□□ 0.36
PCNX1-209ENST00000554879 MAMLD1Q13495 774 aa17.32■□□□□ 0.36
PCNX1-209ENST00000554879 SLMAPQ14BN4 828 aa17.32■□□□□ 0.36
PCNX1-209ENST00000554879 RNF39Q9H2S5 420 aa17.32■□□□□ 0.36
PCNX1-209ENST00000554879 GPATCH2LQ9NWQ4 482 aa17.32■□□□□ 0.36
PCNX1-209ENST00000554879 STYXL1Q9Y6J8 313 aa17.32■□□□□ 0.36
PCNX1-209ENST00000554879 NCANO14594 1321 aa17.32■□□□□ 0.36
PCNX1-209ENST00000554879 F2P00734 622 aa17.31■□□□□ 0.36
PCNX1-209ENST00000554879 MAN1A1P33908 653 aa17.31■□□□□ 0.36
PCNX1-209ENST00000554879 CASC4Q6P4E1 433 aa17.31■□□□□ 0.36
PCNX1-209ENST00000554879 FAM81AQ8TBF8 368 aa17.31■□□□□ 0.36
PCNX1-209ENST00000554879 HMX1Q9NP08 348 aaPredicted RBP17.31■□□□□ 0.36
PCNX1-209ENST00000554879 IPPQ9Y573 584 aa17.31■□□□□ 0.36
PCNX1-209ENST00000554879 ZBTB42B2RXF5 422 aa17.31■□□□□ 0.36
PCNX1-209ENST00000554879 RGS16O15492 202 aaPredicted RBP17.31■□□□□ 0.36
PCNX1-209ENST00000554879 ATP6V1G1O75348 118 aa17.31■□□□□ 0.36
PCNX1-209ENST00000554879 ARL4AP40617 200 aa17.31■□□□□ 0.36
PCNX1-209ENST00000554879 ERFP50548 548 aa17.31■□□□□ 0.36
PCNX1-209ENST00000554879 BCAR1P56945 870 aa17.31■□□□□ 0.36
PCNX1-209ENST00000554879 HTRA3P83110 453 aa17.31■□□□□ 0.36
PCNX1-209ENST00000554879 C17orf99Q6UX52 265 aa17.31■□□□□ 0.36
PCNX1-209ENST00000554879 LRRC57Q8N9N7 239 aa17.31■□□□□ 0.36
PCNX1-209ENST00000554879 CCHCR1Q8TD31 782 aa17.31■□□□□ 0.36
PCNX1-209ENST00000554879 HOMER3Q9NSC5 361 aa17.31■□□□□ 0.36
PCNX1-209ENST00000554879 C2CD2Q9Y426 696 aa17.31■□□□□ 0.36
PCNX1-209ENST00000554879 IGKV6-21A0A0C4DH24 114 aa17.31■□□□□ 0.36
PCNX1-209ENST00000554879 E5RJQ4 531 aa17.31■□□□□ 0.36
PCNX1-209ENST00000554879 LSM8O95777 96 aaKnown RBP17.31■□□□□ 0.36
PCNX1-209ENST00000554879 CYP1A2P05177 515 aa17.31■□□□□ 0.36
PCNX1-209ENST00000554879 LMNB2Q03252 620 aa17.31■□□□□ 0.36
PCNX1-209ENST00000554879 KIAA1841Q6NSI8 718 aa17.31■□□□□ 0.36
PCNX1-209ENST00000554879 SDCCAG8Q86SQ7 713 aaPredicted RBP17.31■□□□□ 0.36
PCNX1-209ENST00000554879 PGBD4Q96DM1 585 aa17.31■□□□□ 0.36
PCNX1-209ENST00000554879 SEPT4O43236 478 aa17.31■□□□□ 0.36
PCNX1-209ENST00000554879 CST8O60676 142 aa17.31■□□□□ 0.36
PCNX1-209ENST00000554879 RFC1P35251 1148 aaPredicted RBP17.31■□□□□ 0.36
PCNX1-209ENST00000554879 PNPLA4P41247 253 aa17.31■□□□□ 0.36
PCNX1-209ENST00000554879 TRADDQ15628 312 aa17.31■□□□□ 0.36
PCNX1-209ENST00000554879 DCAF6Q58WW2 860 aa17.31■□□□□ 0.36
PCNX1-209ENST00000554879 WDR93Q6P2C0 686 aa17.31■□□□□ 0.36
PCNX1-209ENST00000554879 THEM5Q8N1Q8 247 aa17.31■□□□□ 0.36
PCNX1-209ENST00000554879 CCDC33Q8N5R6 958 aa17.31■□□□□ 0.36
PCNX1-209ENST00000554879 RUNDC3BQ96NL0 473 aa17.31■□□□□ 0.36
PCNX1-209ENST00000554879 SMIM28A0A1B0GU29 152 aa17.3■□□□□ 0.36
PCNX1-209ENST00000554879 MYADML2A6NDP7 307 aa17.3■□□□□ 0.36
PCNX1-209ENST00000554879 TSPY1Q01534 308 aa17.3■□□□□ 0.36
PCNX1-209ENST00000554879 STILQ15468 1287 aa17.3■□□□□ 0.36
PCNX1-209ENST00000554879 SLC2A14Q8TDB8 520 aa17.3■□□□□ 0.36
PCNX1-209ENST00000554879 TRIB2Q92519 343 aa17.3■□□□□ 0.36
PCNX1-209ENST00000554879 MRPL45Q9BRJ2 306 aaKnown RBP17.3■□□□□ 0.36
PCNX1-209ENST00000554879 HMGXB4Q9UGU5 601 aa17.3■□□□□ 0.36
PCNX1-209ENST00000554879 BTNL10A8MVZ5 291 aa17.3■□□□□ 0.36
PCNX1-209ENST00000554879 PQBP1O60828 265 aaKnown RBP17.3■□□□□ 0.36
PCNX1-209ENST00000554879 AXLP30530 894 aa17.3■□□□□ 0.36
PCNX1-209ENST00000554879 GPS1Q13098 491 aa17.3■□□□□ 0.36
PCNX1-209ENST00000554879 PPP2R5DQ14738 602 aa17.3■□□□□ 0.36
PCNX1-209ENST00000554879 URGCPQ8TCY9 931 aa17.3■□□□□ 0.36
PCNX1-209ENST00000554879 RXFP2Q8WXD0 754 aa17.3■□□□□ 0.36
PCNX1-209ENST00000554879 HES6Q96HZ4 224 aa17.3■□□□□ 0.36
PCNX1-209ENST00000554879 ZNF518BQ9C0D4 1074 aa17.3■□□□□ 0.36
PCNX1-209ENST00000554879 GPD1P21695 349 aa17.3■□□□□ 0.36
PCNX1-209ENST00000554879 RCOR2Q8IZ40 523 aa17.3■□□□□ 0.36
PCNX1-209ENST00000554879 ERP44Q9BS26 406 aa17.3■□□□□ 0.36
PCNX1-209ENST00000554879 MMADHCQ9H3L0 296 aaPredicted RBP17.3■□□□□ 0.36
PCNX1-209ENST00000554879 TBK1Q9UHD2 729 aa17.3■□□□□ 0.36
PCNX1-209ENST00000554879 CCND3P30281 292 aaPredicted RBP17.29■□□□□ 0.36
PCNX1-209ENST00000554879 MAGOHP61326 146 aaKnown RBP17.29■□□□□ 0.36
PCNX1-209ENST00000554879 CENPCQ03188 943 aa17.29■□□□□ 0.36
PCNX1-209ENST00000554879 CACNB2Q08289 660 aaPredicted RBP17.29■□□□□ 0.36
PCNX1-209ENST00000554879 DHX34Q14147 1143 aaKnown RBP17.29■□□□□ 0.36
PCNX1-209ENST00000554879 MAP7Q14244 749 aa17.29■□□□□ 0.36
PCNX1-209ENST00000554879 MDH1BQ5I0G3 518 aa17.29■□□□□ 0.36
PCNX1-209ENST00000554879 PRCCQ92733 491 aaPredicted RBP17.29■□□□□ 0.36
PCNX1-209ENST00000554879 STAU2Q9NUL3 570 aaKnown RBP eCLIP17.29■□□□□ 0.36
PCNX1-209ENST00000554879 PPEF2O14830 753 aa17.29■□□□□ 0.36
PCNX1-209ENST00000554879 ZNF865P0CJ78 1059 aaPredicted RBP17.29■□□□□ 0.36
PCNX1-209ENST00000554879 COILP38432 576 aaPredicted RBP17.29■□□□□ 0.36
PCNX1-209ENST00000554879 SERPINB4P48594 390 aa17.29■□□□□ 0.36
PCNX1-209ENST00000554879 SETDB1Q15047 1291 aa17.29■□□□□ 0.36
PCNX1-209ENST00000554879 P3H4Q92791 437 aa17.29■□□□□ 0.36
PCNX1-209ENST00000554879 ELOVL4Q9GZR5 314 aa17.29■□□□□ 0.36
PCNX1-209ENST00000554879 TRMT13Q9NUP7 481 aaKnown RBP17.29■□□□□ 0.36
PCNX1-209ENST00000554879 FAM187AA6NFU0 413 aa17.29■□□□□ 0.36
PCNX1-209ENST00000554879 POC1B-GALNT4F8VUJ3 575 aa17.29■□□□□ 0.36
PCNX1-209ENST00000554879 RARAP10276 462 aa17.29■□□□□ 0.36
PCNX1-209ENST00000554879 ACO1P21399 889 aaKnown RBP17.29■□□□□ 0.36
PCNX1-209ENST00000554879 DYNC1I2Q13409 638 aaKnown RBP17.29■□□□□ 0.36
PCNX1-209ENST00000554879 ITGA7Q13683 1181 aa17.29■□□□□ 0.36
PCNX1-209ENST00000554879 WSCD1Q658N2 575 aa17.29■□□□□ 0.36
PCNX1-209ENST00000554879 ATP6V1G3Q96LB4 118 aa17.29■□□□□ 0.36
PCNX1-209ENST00000554879 AVENQ9NQS1 362 aaPredicted RBP17.29■□□□□ 0.36
PCNX1-209ENST00000554879 DDX43Q9NXZ2 648 aaKnown RBP17.29■□□□□ 0.36
PCNX1-209ENST00000554879 MAGED2Q9UNF1 606 aaPredicted RBP17.29■□□□□ 0.36
PCNX1-209ENST00000554879 PCDHA3Q9Y5H8 950 aa17.29■□□□□ 0.36
PCNX1-209ENST00000554879 PYGBP11216 843 aa17.29■□□□□ 0.36
PCNX1-209ENST00000554879 ATL2Q8NHH9 583 aa17.29■□□□□ 0.36
PCNX1-209ENST00000554879 STMN2Q93045 179 aa17.29■□□□□ 0.36
PCNX1-209ENST00000554879 TSPYL2Q9H2G4 693 aaPredicted RBP17.29■□□□□ 0.36
PCNX1-209ENST00000554879 DDX56Q9NY93 547 aaKnown RBP17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms