RNA–Protein interactions for RNA: ENST00000554409.1

LINC00640-201, long intergenic non-protein coding RNA 640, humanhuman

TSL 3 BASIC

Gene LINC00640, Length 498 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00640-201ENST00000554409 SLC35C1Q96A29 364 aa8□□□□□ -1.13
LINC00640-201ENST00000554409 CLDN23Q96B33 292 aa8□□□□□ -1.13
LINC00640-201ENST00000554409 ELMO3Q96BJ8 720 aa8□□□□□ -1.13
LINC00640-201ENST00000554409 SMARCD1Q96GM5 515 aa8□□□□□ -1.13
LINC00640-201ENST00000554409 CEP63Q96MT8 703 aa8□□□□□ -1.13
LINC00640-201ENST00000554409 LRRC3BQ96PB8 259 aa8□□□□□ -1.13
LINC00640-201ENST00000554409 FOXQ1Q9C009 403 aa8□□□□□ -1.13
LINC00640-201ENST00000554409 ZNF518BQ9C0D4 1074 aa8□□□□□ -1.13
LINC00640-201ENST00000554409 METTL14Q9HCE5 456 aaKnown RBP8□□□□□ -1.13
LINC00640-201ENST00000554409 LTB4R2Q9NPC1 389 aa8□□□□□ -1.13
LINC00640-201ENST00000554409 TDP1Q9NUW8 608 aa8□□□□□ -1.13
LINC00640-201ENST00000554409 GCNT4Q9P109 453 aa8□□□□□ -1.13
LINC00640-201ENST00000554409 COQ4Q9Y3A0 265 aa8□□□□□ -1.13
LINC00640-201ENST00000554409 MYH10P35580 1976 aa7.99□□□□□ -1.13
LINC00640-201ENST00000554409 BICDL2A1A5D9 508 aa7.99□□□□□ -1.13
LINC00640-201ENST00000554409 H0Y858 1186 aa7.99□□□□□ -1.13
LINC00640-201ENST00000554409 CLDN5O00501 218 aa7.99□□□□□ -1.13
LINC00640-201ENST00000554409 PMM2O15305 246 aa7.99□□□□□ -1.13
LINC00640-201ENST00000554409 NCAM2O15394 837 aa7.99□□□□□ -1.13
LINC00640-201ENST00000554409 CILPO75339 1184 aa7.99□□□□□ -1.13
LINC00640-201ENST00000554409 RTN3O95197 1032 aaPredicted RBP7.99□□□□□ -1.13
LINC00640-201ENST00000554409 DCNP07585 359 aaKnown RBP7.99□□□□□ -1.13
LINC00640-201ENST00000554409 USP17L7P0C7H9 530 aa7.99□□□□□ -1.13
LINC00640-201ENST00000554409 TRIM21P19474 475 aaKnown RBP7.99□□□□□ -1.13
LINC00640-201ENST00000554409 TARSP26639 723 aaKnown RBP7.99□□□□□ -1.13
LINC00640-201ENST00000554409 USP46P62068 366 aa7.99□□□□□ -1.13
LINC00640-201ENST00000554409 USP4Q13107 963 aa7.99□□□□□ -1.13
LINC00640-201ENST00000554409 TTI2Q6NXR4 508 aa7.99□□□□□ -1.13
LINC00640-201ENST00000554409 FRMD5Q7Z6J6 570 aa7.99□□□□□ -1.13
LINC00640-201ENST00000554409 ACOT1Q86TX2 421 aa7.99□□□□□ -1.13
LINC00640-201ENST00000554409 FANCMQ8IYD8 2048 aa7.99□□□□□ -1.13
LINC00640-201ENST00000554409 FUKQ8N0W3 1084 aa7.99□□□□□ -1.13
LINC00640-201ENST00000554409 TTC39CQ8N584 583 aa7.99□□□□□ -1.13
LINC00640-201ENST00000554409 KIAA1958Q8N8K9 716 aa7.99□□□□□ -1.13
LINC00640-201ENST00000554409 CSGALNACT1Q8TDX6 532 aa7.99□□□□□ -1.13
LINC00640-201ENST00000554409 WHAMMQ8TF30 809 aa7.99□□□□□ -1.13
LINC00640-201ENST00000554409 SEMA4DQ92854 862 aa7.99□□□□□ -1.13
LINC00640-201ENST00000554409 USP13Q92995 863 aaPredicted RBP7.99□□□□□ -1.13
LINC00640-201ENST00000554409 EEF2KMTQ96G04 330 aa7.99□□□□□ -1.13
LINC00640-201ENST00000554409 DUSP9Q99956 384 aaKnown RBP7.99□□□□□ -1.13
LINC00640-201ENST00000554409 FAM83CQ9BQN1 747 aa7.99□□□□□ -1.13
LINC00640-201ENST00000554409 NT5C1AQ9BXI3 368 aa7.99□□□□□ -1.13
LINC00640-201ENST00000554409 DNAI2Q9GZS0 605 aa7.99□□□□□ -1.13
LINC00640-201ENST00000554409 SMG9Q9H0W8 520 aaKnown RBP7.99□□□□□ -1.13
LINC00640-201ENST00000554409 C8orf33Q9H7E9 229 aaPredicted RBP7.99□□□□□ -1.13
LINC00640-201ENST00000554409 MMRN2Q9H8L6 949 aa7.99□□□□□ -1.13
LINC00640-201ENST00000554409 CSNK1G1Q9HCP0 422 aa7.99□□□□□ -1.13
LINC00640-201ENST00000554409 DMAP1Q9NPF5 467 aaPredicted RBP7.99□□□□□ -1.13
LINC00640-201ENST00000554409 NPDC1Q9NQX5 325 aaPredicted RBP7.99□□□□□ -1.13
LINC00640-201ENST00000554409 KRT82Q9NSB4 513 aa7.99□□□□□ -1.13
LINC00640-201ENST00000554409 THG1LQ9NWX6 298 aaKnown RBP7.99□□□□□ -1.13
LINC00640-201ENST00000554409 COMMD8Q9NX08 183 aa7.99□□□□□ -1.13
LINC00640-201ENST00000554409 RAB20Q9NX57 234 aa7.99□□□□□ -1.13
LINC00640-201ENST00000554409 IL37Q9NZH6 218 aa7.99□□□□□ -1.13
LINC00640-201ENST00000554409 TRPM5Q9NZQ8 1165 aa7.99□□□□□ -1.13
LINC00640-201ENST00000554409 HMGXB4Q9UGU5 601 aa7.99□□□□□ -1.13
LINC00640-201ENST00000554409 ARMCX3Q9UH62 379 aaPredicted RBP7.99□□□□□ -1.13
LINC00640-201ENST00000554409 CCL26Q9Y258 94 aa7.99□□□□□ -1.13
LINC00640-201ENST00000554409 MTF2Q9Y483 593 aaPredicted RBP7.99□□□□□ -1.13
LINC00640-201ENST00000554409 PIAS3Q9Y6X2 628 aa7.99□□□□□ -1.13
LINC00640-201ENST00000554409 TRAV19A0A0A6YYK7 116 aa7.98□□□□□ -1.13
LINC00640-201ENST00000554409 FAM92AA1XBS5 289 aa7.98□□□□□ -1.13
LINC00640-201ENST00000554409 ZNF840PA6NDX5 716 aa7.98□□□□□ -1.13
LINC00640-201ENST00000554409 FAM170BA6NMN3 283 aa7.98□□□□□ -1.13
LINC00640-201ENST00000554409 PROB1E7EW31 1015 aa7.98□□□□□ -1.13
LINC00640-201ENST00000554409 TNFRSF10BO14763 440 aa7.98□□□□□ -1.13
LINC00640-201ENST00000554409 LRRN2O75325 713 aa7.98□□□□□ -1.13
LINC00640-201ENST00000554409 GNA14O95837 355 aa7.98□□□□□ -1.13
LINC00640-201ENST00000554409 OLFM2O95897 454 aa7.98□□□□□ -1.13
LINC00640-201ENST00000554409 OAS1P00973 400 aaKnown RBP7.98□□□□□ -1.13
LINC00640-201ENST00000554409 CCDC130P13994 396 aa7.98□□□□□ -1.13
LINC00640-201ENST00000554409 CD72P21854 359 aa7.98□□□□□ -1.13
LINC00640-201ENST00000554409 YWHAQP27348 245 aa7.98□□□□□ -1.13
LINC00640-201ENST00000554409 NBL1P41271 181 aa7.98□□□□□ -1.13
LINC00640-201ENST00000554409 SLC5A3P53794 718 aa7.98□□□□□ -1.13
LINC00640-201ENST00000554409 MARSP56192 900 aaKnown RBP7.98□□□□□ -1.13
LINC00640-201ENST00000554409 FZD5Q13467 585 aa7.98□□□□□ -1.13
LINC00640-201ENST00000554409 UBXN2BQ14CS0 331 aa7.98□□□□□ -1.13
LINC00640-201ENST00000554409 ANGPT1Q15389 498 aa7.98□□□□□ -1.13
LINC00640-201ENST00000554409 ZNF77Q15935 545 aa7.98□□□□□ -1.13
LINC00640-201ENST00000554409 CBWD6Q4V339 395 aa7.98□□□□□ -1.13
LINC00640-201ENST00000554409 DCAF17Q5H9S7 520 aaPredicted RBP7.98□□□□□ -1.13
LINC00640-201ENST00000554409 CBWD3Q5JTY5 395 aa7.98□□□□□ -1.13
LINC00640-201ENST00000554409 CBWD5Q5RIA9 395 aa7.98□□□□□ -1.13
LINC00640-201ENST00000554409 TCERG1LQ5VWI1 586 aa7.98□□□□□ -1.13
LINC00640-201ENST00000554409 SNX30Q5VWJ9 437 aa7.98□□□□□ -1.13
LINC00640-201ENST00000554409 ISM2Q6H9L7 571 aa7.98□□□□□ -1.13
LINC00640-201ENST00000554409 RALGPS2Q86X27 583 aaPredicted RBP7.98□□□□□ -1.13
LINC00640-201ENST00000554409 NUP93Q8N1F7 819 aa7.98□□□□□ -1.13
LINC00640-201ENST00000554409 PDZD8Q8NEN9 1154 aa7.98□□□□□ -1.13
LINC00640-201ENST00000554409 ZMIZ2Q8NF64 920 aa7.98□□□□□ -1.13
LINC00640-201ENST00000554409 SLC2A14Q8TDB8 520 aa7.98□□□□□ -1.13
LINC00640-201ENST00000554409 NELFBQ8WX92 580 aa7.98□□□□□ -1.13
LINC00640-201ENST00000554409 FAM3CQ92520 227 aa7.98□□□□□ -1.13
LINC00640-201ENST00000554409 ATOH1Q92858 354 aaPredicted RBP7.98□□□□□ -1.13
LINC00640-201ENST00000554409 TATDN2Q93075 761 aa7.98□□□□□ -1.13
LINC00640-201ENST00000554409 SLITRK1Q96PX8 696 aa7.98□□□□□ -1.13
LINC00640-201ENST00000554409 TWNKQ96RR1 684 aa7.98□□□□□ -1.13
LINC00640-201ENST00000554409 SLC22A12Q96S37 553 aa7.98□□□□□ -1.13
LINC00640-201ENST00000554409 KCNK16Q96T55 309 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms