RNA–Protein interactions for RNA: ENST00000554018.1

TRAPPC6B-204, Transcript of trafficking protein particle complex 6B, humanhuman

TSL 4

Gene TRAPPC6B, Length 541 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC6B-204ENST00000554018 NR2F2P24468 414 aa12.64□□□□□ -0.39
TRAPPC6B-204ENST00000554018 GJA4P35212 333 aa12.64□□□□□ -0.39
TRAPPC6B-204ENST00000554018 IFNAR2P48551 515 aa12.64□□□□□ -0.39
TRAPPC6B-204ENST00000554018 GALK1P51570 392 aa12.64□□□□□ -0.39
TRAPPC6B-204ENST00000554018 GRSF1Q12849 480 aaKnown RBP eCLIP12.64□□□□□ -0.39
TRAPPC6B-204ENST00000554018 LPAL2Q16609 132 aa12.64□□□□□ -0.39
TRAPPC6B-204ENST00000554018 EML3Q32P44 896 aa12.64□□□□□ -0.39
TRAPPC6B-204ENST00000554018 SPOPLQ6IQ16 392 aa12.64□□□□□ -0.39
TRAPPC6B-204ENST00000554018 PAQR9Q6ZVX9 377 aa12.64□□□□□ -0.39
TRAPPC6B-204ENST00000554018 ACOT1Q86TX2 421 aa12.64□□□□□ -0.39
TRAPPC6B-204ENST00000554018 NUP93Q8N1F7 819 aa12.64□□□□□ -0.39
TRAPPC6B-204ENST00000554018 CPA6Q8N4T0 437 aa12.64□□□□□ -0.39
TRAPPC6B-204ENST00000554018 ATP2A3Q93084 1043 aa12.64□□□□□ -0.39
TRAPPC6B-204ENST00000554018 KCNK16Q96T55 309 aa12.64□□□□□ -0.39
TRAPPC6B-204ENST00000554018 MED10Q9BTT4 135 aa12.64□□□□□ -0.39
TRAPPC6B-204ENST00000554018 RNF38Q9H0F5 515 aa12.64□□□□□ -0.39
TRAPPC6B-204ENST00000554018 EHD2Q9NZN4 543 aa12.64□□□□□ -0.39
TRAPPC6B-204ENST00000554018 HMGXB4Q9UGU5 601 aa12.64□□□□□ -0.39
TRAPPC6B-204ENST00000554018 LEFTY2O00292 366 aa12.63□□□□□ -0.39
TRAPPC6B-204ENST00000554018 IKBKBO14920 756 aa12.63□□□□□ -0.39
TRAPPC6B-204ENST00000554018 HRO43593 1189 aa12.63□□□□□ -0.39
TRAPPC6B-204ENST00000554018 AKAP3O75969 853 aa12.63□□□□□ -0.39
TRAPPC6B-204ENST00000554018 ASS1P00966 412 aaKnown RBP12.63□□□□□ -0.39
TRAPPC6B-204ENST00000554018 EGFP01133 1207 aa12.63□□□□□ -0.39
TRAPPC6B-204ENST00000554018 HLA-DRAP01903 254 aa12.63□□□□□ -0.39
TRAPPC6B-204ENST00000554018 P4HA1P13674 534 aa12.63□□□□□ -0.39
TRAPPC6B-204ENST00000554018 TCF3P15923 654 aa12.63□□□□□ -0.39
TRAPPC6B-204ENST00000554018 PIK3CAP42336 1068 aa12.63□□□□□ -0.39
TRAPPC6B-204ENST00000554018 ID4P47928 161 aa12.63□□□□□ -0.39
TRAPPC6B-204ENST00000554018 GCLMP48507 274 aa12.63□□□□□ -0.39
TRAPPC6B-204ENST00000554018 PDE6CP51160 858 aa12.63□□□□□ -0.39
TRAPPC6B-204ENST00000554018 VAMP7P51809 220 aa12.63□□□□□ -0.39
TRAPPC6B-204ENST00000554018 AMPD2Q01433 879 aa12.63□□□□□ -0.39
TRAPPC6B-204ENST00000554018 SRSF5Q13243 272 aaKnown RBP12.63□□□□□ -0.39
TRAPPC6B-204ENST00000554018 FAM35AQ86V20 835 aa12.63□□□□□ -0.39
TRAPPC6B-204ENST00000554018 SMYD4Q8IYR2 804 aaPredicted RBP12.63□□□□□ -0.39
TRAPPC6B-204ENST00000554018 FUKQ8N0W3 1084 aa12.63□□□□□ -0.39
TRAPPC6B-204ENST00000554018 GUF1Q8N442 669 aaKnown RBP12.63□□□□□ -0.39
TRAPPC6B-204ENST00000554018 SCAMP5Q8TAC9 235 aa12.63□□□□□ -0.39
TRAPPC6B-204ENST00000554018 TAF4BQ92750 862 aa12.63□□□□□ -0.39
TRAPPC6B-204ENST00000554018 TNIP3Q96KP6 325 aa12.63□□□□□ -0.39
TRAPPC6B-204ENST00000554018 P2RY13Q9BPV8 354 aa12.63□□□□□ -0.39
TRAPPC6B-204ENST00000554018 POLR3BQ9NW08 1133 aaPredicted RBP12.63□□□□□ -0.39
TRAPPC6B-204ENST00000554018 ATP8B3O60423 1300 aa12.62□□□□□ -0.39
TRAPPC6B-204ENST00000554018 ABCA7Q8IZY2 2146 aa12.62□□□□□ -0.39
TRAPPC6B-204ENST00000554018 GON4LQ3T8J9 2241 aa12.62□□□□□ -0.39
TRAPPC6B-204ENST00000554018 TNFRSF10BO14763 440 aa12.62□□□□□ -0.39
TRAPPC6B-204ENST00000554018 SCAMP3O14828 347 aaKnown RBP12.62□□□□□ -0.39
TRAPPC6B-204ENST00000554018 MAPK13O15264 365 aa12.62□□□□□ -0.39
TRAPPC6B-204ENST00000554018 RNF40O75150 1001 aa12.62□□□□□ -0.39
TRAPPC6B-204ENST00000554018 AP1G2O75843 785 aa12.62□□□□□ -0.39
TRAPPC6B-204ENST00000554018 RTN3O95197 1032 aaPredicted RBP12.62□□□□□ -0.39
TRAPPC6B-204ENST00000554018 OAS1P00973 400 aaKnown RBP12.62□□□□□ -0.39
TRAPPC6B-204ENST00000554018 CCDC130P13994 396 aa12.62□□□□□ -0.39
TRAPPC6B-204ENST00000554018 PFKLP17858 780 aa12.62□□□□□ -0.39
TRAPPC6B-204ENST00000554018 RPL13P26373 211 aaKnown RBP12.62□□□□□ -0.39
TRAPPC6B-204ENST00000554018 YWHAQP27348 245 aa12.62□□□□□ -0.39
TRAPPC6B-204ENST00000554018 ASPAP45381 313 aa12.62□□□□□ -0.39
TRAPPC6B-204ENST00000554018 PPP3CCP48454 512 aa12.62□□□□□ -0.39
TRAPPC6B-204ENST00000554018 NDST1P52848 882 aa12.62□□□□□ -0.39
TRAPPC6B-204ENST00000554018 SLC7A9P82251 487 aa12.62□□□□□ -0.39
TRAPPC6B-204ENST00000554018 PPP3CAQ08209 521 aa12.62□□□□□ -0.39
TRAPPC6B-204ENST00000554018 ADAM9Q13443 819 aa12.62□□□□□ -0.39
TRAPPC6B-204ENST00000554018 PNOCQ13519 176 aa12.62□□□□□ -0.39
TRAPPC6B-204ENST00000554018 NFIL3Q16649 462 aa12.62□□□□□ -0.39
TRAPPC6B-204ENST00000554018 ZCWPW2Q504Y3 356 aa12.62□□□□□ -0.39
TRAPPC6B-204ENST00000554018 PRR23BQ6ZRT6 265 aa12.62□□□□□ -0.39
TRAPPC6B-204ENST00000554018 INTS8Q75QN2 995 aaKnown RBP12.62□□□□□ -0.39
TRAPPC6B-204ENST00000554018 FAM186BQ8IYM0 893 aa12.62□□□□□ -0.39
TRAPPC6B-204ENST00000554018 C12orf29Q8N999 325 aa12.62□□□□□ -0.39
TRAPPC6B-204ENST00000554018 FBXO32Q969P5 355 aa12.62□□□□□ -0.39
TRAPPC6B-204ENST00000554018 RMDN1Q96DB5 314 aa12.62□□□□□ -0.39
TRAPPC6B-204ENST00000554018 EEF2KMTQ96G04 330 aa12.62□□□□□ -0.39
TRAPPC6B-204ENST00000554018 SMARCD1Q96GM5 515 aa12.62□□□□□ -0.39
TRAPPC6B-204ENST00000554018 SLITRK1Q96PX8 696 aa12.62□□□□□ -0.39
TRAPPC6B-204ENST00000554018 MMRN2Q9H8L6 949 aa12.62□□□□□ -0.39
TRAPPC6B-204ENST00000554018 KRT82Q9NSB4 513 aa12.62□□□□□ -0.39
TRAPPC6B-204ENST00000554018 SMPD4Q9NXE4 827 aa12.62□□□□□ -0.39
TRAPPC6B-204ENST00000554018 CHORDC1Q9UHD1 332 aaPredicted RBP12.62□□□□□ -0.39
TRAPPC6B-204ENST00000554018 CPQQ9Y646 472 aa12.62□□□□□ -0.39
TRAPPC6B-204ENST00000554018 OLFM2O95897 454 aa12.61□□□□□ -0.39
TRAPPC6B-204ENST00000554018 KRT13P13646 458 aa12.61□□□□□ -0.39
TRAPPC6B-204ENST00000554018 DRD1P21728 446 aa12.61□□□□□ -0.39
TRAPPC6B-204ENST00000554018 PSMC2P35998 433 aaKnown RBP12.61□□□□□ -0.39
TRAPPC6B-204ENST00000554018 PXNP49023 591 aaPredicted RBP12.61□□□□□ -0.39
TRAPPC6B-204ENST00000554018 NR1H3Q13133 447 aa12.61□□□□□ -0.39
TRAPPC6B-204ENST00000554018 SIM2Q14190 667 aaPredicted RBP12.61□□□□□ -0.39
TRAPPC6B-204ENST00000554018 BECN1Q14457 450 aa12.61□□□□□ -0.39
TRAPPC6B-204ENST00000554018 FILIP1Q7Z7B0 1213 aa12.61□□□□□ -0.39
TRAPPC6B-204ENST00000554018 LONP2Q86WA8 852 aa12.61□□□□□ -0.39
TRAPPC6B-204ENST00000554018 FMR1NBQ8N0W7 255 aaPredicted RBP12.61□□□□□ -0.39
TRAPPC6B-204ENST00000554018 CRYBG2Q8N1P7 616 aa12.61□□□□□ -0.39
TRAPPC6B-204ENST00000554018 ZMIZ2Q8NF64 920 aa12.61□□□□□ -0.39
TRAPPC6B-204ENST00000554018 SLC2A14Q8TDB8 520 aa12.61□□□□□ -0.39
TRAPPC6B-204ENST00000554018 TAS1R2Q8TE23 839 aa12.61□□□□□ -0.39
TRAPPC6B-204ENST00000554018 EZH1Q92800 747 aaPredicted RBP12.61□□□□□ -0.39
TRAPPC6B-204ENST00000554018 CD101Q93033 1021 aa12.61□□□□□ -0.39
TRAPPC6B-204ENST00000554018 SECISBP2LQ93073 1101 aaKnown RBP12.61□□□□□ -0.39
TRAPPC6B-204ENST00000554018 TWNKQ96RR1 684 aa12.61□□□□□ -0.39
TRAPPC6B-204ENST00000554018 SMOQ99835 787 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 127.4 ms