RNA–Protein interactions for RNA: ENST00000553427.5

CPSF2-202, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 4

Gene CPSF2, Length 715 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-202ENST00000553427 MAB21L3Q8N8X9 362 aa19.52■□□□□ 0.72
CPSF2-202ENST00000553427 ANKRD52Q8NB46 1076 aa19.52■□□□□ 0.72
CPSF2-202ENST00000553427 TRMT61BQ9BVS5 477 aaKnown RBP19.52■□□□□ 0.72
CPSF2-202ENST00000553427 UBXN6Q9BZV1 441 aa19.52■□□□□ 0.72
CPSF2-202ENST00000553427 NAT10Q9H0A0 1025 aaKnown RBP19.52■□□□□ 0.72
CPSF2-202ENST00000553427 FBXO44Q9H4M3 255 aa19.52■□□□□ 0.72
CPSF2-202ENST00000553427 FBXL21Q9UKT6 434 aa19.52■□□□□ 0.72
CPSF2-202ENST00000553427 PCDHB4Q9Y5E5 795 aa19.52■□□□□ 0.72
CPSF2-202ENST00000553427 TRAV19A0A0A6YYK7 116 aa19.51■□□□□ 0.71
CPSF2-202ENST00000553427 OLFM2O95897 454 aa19.51■□□□□ 0.71
CPSF2-202ENST00000553427 ZDHHC11BP0C7U3 371 aa19.51■□□□□ 0.71
CPSF2-202ENST00000553427 TCF3P15923 654 aa19.51■□□□□ 0.71
CPSF2-202ENST00000553427 STILQ15468 1287 aa19.51■□□□□ 0.71
CPSF2-202ENST00000553427 HSP90AA4PQ58FG1 418 aa19.51■□□□□ 0.71
CPSF2-202ENST00000553427 RBBP8NLQ8NC74 664 aaPredicted RBP19.51■□□□□ 0.71
CPSF2-202ENST00000553427 SCAMP5Q8TAC9 235 aa19.51■□□□□ 0.71
CPSF2-202ENST00000553427 FBXO32Q969P5 355 aa19.51■□□□□ 0.71
CPSF2-202ENST00000553427 UBE2TQ9NPD8 197 aaPredicted RBP19.51■□□□□ 0.71
CPSF2-202ENST00000553427 ZDBF2Q9HCK1 2354 aa19.51■□□□□ 0.71
CPSF2-202ENST00000553427 O00370 1275 aa19.5■□□□□ 0.71
CPSF2-202ENST00000553427 DPYSL4O14531 572 aa19.5■□□□□ 0.71
CPSF2-202ENST00000553427 OAS1P00973 400 aaKnown RBP19.5■□□□□ 0.71
CPSF2-202ENST00000553427 CFHP08603 1231 aa19.5■□□□□ 0.71
CPSF2-202ENST00000553427 USP17L7P0C7H9 530 aa19.5■□□□□ 0.71
CPSF2-202ENST00000553427 ZNF18P17022 549 aa19.5■□□□□ 0.71
CPSF2-202ENST00000553427 SLC9A1P19634 815 aa19.5■□□□□ 0.71
CPSF2-202ENST00000553427 TUBP50607 506 aa19.5■□□□□ 0.71
CPSF2-202ENST00000553427 BCAT1P54687 386 aa19.5■□□□□ 0.71
CPSF2-202ENST00000553427 MFAP3P55082 362 aa19.5■□□□□ 0.71
CPSF2-202ENST00000553427 SLC8A3P57103 927 aa19.5■□□□□ 0.71
CPSF2-202ENST00000553427 NCAPHQ15003 741 aa19.5■□□□□ 0.71
CPSF2-202ENST00000553427 TTC30AQ86WT1 665 aa19.5■□□□□ 0.71
CPSF2-202ENST00000553427 IRF7Q92985 503 aa19.5■□□□□ 0.71
CPSF2-202ENST00000553427 USP13Q92995 863 aaPredicted RBP19.5■□□□□ 0.71
CPSF2-202ENST00000553427 PBXIP1Q96AQ6 731 aa19.5■□□□□ 0.71
CPSF2-202ENST00000553427 FUCA2Q9BTY2 467 aa19.5■□□□□ 0.71
CPSF2-202ENST00000553427 SIX2Q9NPC8 291 aa19.5■□□□□ 0.71
CPSF2-202ENST00000553427 ARHGEF3Q9NR81 526 aa19.5■□□□□ 0.71
CPSF2-202ENST00000553427 TDP1Q9NUW8 608 aa19.5■□□□□ 0.71
CPSF2-202ENST00000553427 FANCLQ9NW38 375 aa19.5■□□□□ 0.71
CPSF2-202ENST00000553427 TSPAN16Q9UKR8 245 aa19.5■□□□□ 0.71
CPSF2-202ENST00000553427 ARHGAP26Q9UNA1 814 aa19.5■□□□□ 0.71
CPSF2-202ENST00000553427 SCML2Q9UQR0 700 aa19.5■□□□□ 0.71
CPSF2-202ENST00000553427 ZNF638Q14966 1978 aaKnown RBP19.5■□□□□ 0.71
CPSF2-202ENST00000553427 C2orf78A6NCI8 922 aa19.49■□□□□ 0.71
CPSF2-202ENST00000553427 ARNTLO00327 626 aa19.49■□□□□ 0.71
CPSF2-202ENST00000553427 CHADO15335 359 aa19.49■□□□□ 0.71
CPSF2-202ENST00000553427 CKMP06732 381 aa19.49■□□□□ 0.71
CPSF2-202ENST00000553427 CD19P15391 556 aa19.49■□□□□ 0.71
CPSF2-202ENST00000553427 KIF11P52732 1056 aa19.49■□□□□ 0.71
CPSF2-202ENST00000553427 PLCB2Q00722 1185 aa19.49■□□□□ 0.71
CPSF2-202ENST00000553427 USP4Q13107 963 aa19.49■□□□□ 0.71
CPSF2-202ENST00000553427 GRM2Q14416 872 aa19.49■□□□□ 0.71
CPSF2-202ENST00000553427 KRT31Q15323 416 aa19.49■□□□□ 0.71
CPSF2-202ENST00000553427 MEA1Q16626 185 aa19.49■□□□□ 0.71
CPSF2-202ENST00000553427 GOLGA7BQ2TAP0 167 aa19.49■□□□□ 0.71
CPSF2-202ENST00000553427 SKOR2Q2VWA4 1001 aaPredicted RBP19.49■□□□□ 0.71
CPSF2-202ENST00000553427 ARHGAP29Q52LW3 1261 aa19.49■□□□□ 0.71
CPSF2-202ENST00000553427 LCLAT1Q6UWP7 414 aa19.49■□□□□ 0.71
CPSF2-202ENST00000553427 GPRIN1Q7Z2K8 1008 aa19.49■□□□□ 0.71
CPSF2-202ENST00000553427 SIX5Q8N196 739 aa19.49■□□□□ 0.71
CPSF2-202ENST00000553427 FBXL6Q8N531 539 aa19.49■□□□□ 0.71
CPSF2-202ENST00000553427 KIAA1958Q8N8K9 716 aa19.49■□□□□ 0.71
CPSF2-202ENST00000553427 BPIFB1Q8TDL5 484 aa19.49■□□□□ 0.71
CPSF2-202ENST00000553427 SHC3Q92529 594 aa19.49■□□□□ 0.71
CPSF2-202ENST00000553427 LRRC3BQ96PB8 259 aa19.49■□□□□ 0.71
CPSF2-202ENST00000553427 BRD9Q9H8M2 597 aa19.49■□□□□ 0.71
CPSF2-202ENST00000553427 TRPC7Q9HCX4 862 aa19.49■□□□□ 0.71
CPSF2-202ENST00000553427 USP3Q9Y6I4 520 aa19.49■□□□□ 0.71
CPSF2-202ENST00000553427 KIF26AQ9ULI4 1882 aaPredicted RBP19.49■□□□□ 0.71
CPSF2-202ENST00000553427 ANAPC1Q9H1A4 1944 aa19.49■□□□□ 0.71
CPSF2-202ENST00000553427 KRBA1A5PL33 1030 aa19.48■□□□□ 0.71
CPSF2-202ENST00000553427 RNF225M0QZC1 329 aaPredicted RBP19.48■□□□□ 0.71
CPSF2-202ENST00000553427 ZNF263O14978 683 aa19.48■□□□□ 0.71
CPSF2-202ENST00000553427 XPO1O14980 1071 aaKnown RBP19.48■□□□□ 0.71
CPSF2-202ENST00000553427 SETSIPP0DME0 302 aa19.48■□□□□ 0.71
CPSF2-202ENST00000553427 RFX1P22670 979 aa19.48■□□□□ 0.71
CPSF2-202ENST00000553427 GDI1P31150 447 aa19.48■□□□□ 0.71
CPSF2-202ENST00000553427 SLC7A9P82251 487 aa19.48■□□□□ 0.71
CPSF2-202ENST00000553427 PRKCQQ04759 706 aa19.48■□□□□ 0.71
CPSF2-202ENST00000553427 BST2Q10589 180 aaKnown RBP19.48■□□□□ 0.71
CPSF2-202ENST00000553427 CNGA2Q16280 664 aa19.48■□□□□ 0.71
CPSF2-202ENST00000553427 ANO6Q4KMQ2 910 aa19.48■□□□□ 0.71
CPSF2-202ENST00000553427 PKDCCQ504Y2 493 aa19.48■□□□□ 0.71
CPSF2-202ENST00000553427 RAB41Q5JT25 222 aa19.48■□□□□ 0.71
CPSF2-202ENST00000553427 DPY19L2P1Q6NXN4 242 aa19.48■□□□□ 0.71
CPSF2-202ENST00000553427 CCDC186Q7Z3E2 898 aa19.48■□□□□ 0.71
CPSF2-202ENST00000553427 YAF2Q8IY57 180 aa19.48■□□□□ 0.71
CPSF2-202ENST00000553427 TFAP2BQ92481 460 aa19.48■□□□□ 0.71
CPSF2-202ENST00000553427 SHDQ96IW2 340 aa19.48■□□□□ 0.71
CPSF2-202ENST00000553427 SLC22A12Q96S37 553 aa19.48■□□□□ 0.71
CPSF2-202ENST00000553427 SMG9Q9H0W8 520 aaKnown RBP19.48■□□□□ 0.71
CPSF2-202ENST00000553427 HSD3B7Q9H2F3 369 aa19.48■□□□□ 0.71
CPSF2-202ENST00000553427 TAB2Q9NYJ8 693 aa19.48■□□□□ 0.71
CPSF2-202ENST00000553427 GMIPQ9P107 970 aa19.48■□□□□ 0.71
CPSF2-202ENST00000553427 HESX1Q9UBX0 185 aa19.48■□□□□ 0.71
CPSF2-202ENST00000553427 LIMA1Q9UHB6 759 aaKnown RBP19.48■□□□□ 0.71
CPSF2-202ENST00000553427 WDR3Q9UNX4 943 aaKnown RBP eCLIP19.48■□□□□ 0.71
CPSF2-202ENST00000553427 CCL26Q9Y258 94 aa19.48■□□□□ 0.71
CPSF2-202ENST00000553427 COL4A2P08572 1712 aa19.48■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms