RNA–Protein interactions for RNA: ENST00000550851.5

LGR5-206, Transcript of leucine rich repeat containing G protein-coupled receptor 5, humanhuman

TSL 2

Gene LGR5, Length 4,095 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LGR5-206ENST00000550851 TNFSF13BQ9Y275 285 aa12.13□□□□□ -0.47
LGR5-206ENST00000550851 PCDHA3Q9Y5H8 950 aa12.13□□□□□ -0.47
LGR5-206ENST00000550851 TRIM49D1C9J1S8 452 aa12.13□□□□□ -0.47
LGR5-206ENST00000550851 E5RI56 91 aa12.13□□□□□ -0.47
LGR5-206ENST00000550851 LRRC37A3O60309 1634 aa12.13□□□□□ -0.47
LGR5-206ENST00000550851 CST3P01034 146 aaPredicted RBP12.13□□□□□ -0.47
LGR5-206ENST00000550851 RARGP13631 454 aa12.13□□□□□ -0.47
LGR5-206ENST00000550851 KRT4P19013 534 aa12.13□□□□□ -0.47
LGR5-206ENST00000550851 HNRNPH3P31942 346 aaKnown RBP12.13□□□□□ -0.47
LGR5-206ENST00000550851 MAP2K5Q13163 448 aa12.13□□□□□ -0.47
LGR5-206ENST00000550851 ZCWPW2Q504Y3 356 aa12.13□□□□□ -0.47
LGR5-206ENST00000550851 TMTC4Q5T4D3 741 aa12.13□□□□□ -0.47
LGR5-206ENST00000550851 FBXO32Q969P5 355 aa12.13□□□□□ -0.47
LGR5-206ENST00000550851 SENP1Q9P0U3 644 aa12.13□□□□□ -0.47
LGR5-206ENST00000550851 AFF4Q9UHB7 1163 aaKnown RBP12.13□□□□□ -0.47
LGR5-206ENST00000550851 TRIM17Q9Y577 477 aa12.13□□□□□ -0.47
LGR5-206ENST00000550851 ARFGEF2Q9Y6D5 1785 aa12.13□□□□□ -0.47
LGR5-206ENST00000550851 NRCAMQ92823 1304 aa12.12□□□□□ -0.47
LGR5-206ENST00000550851 CNTNAP2Q9UHC6 1331 aa12.12□□□□□ -0.47
LGR5-206ENST00000550851 FRMD3A2A2Y4 597 aa12.12□□□□□ -0.47
LGR5-206ENST00000550851 HAUS5O94927 633 aa12.12□□□□□ -0.47
LGR5-206ENST00000550851 FOXD4Q12950 439 aaPredicted RBP12.12□□□□□ -0.47
LGR5-206ENST00000550851 USP10Q14694 798 aaKnown RBP12.12□□□□□ -0.47
LGR5-206ENST00000550851 PTGISQ16647 500 aa12.12□□□□□ -0.47
LGR5-206ENST00000550851 PLPPR4Q7Z2D5 763 aa12.12□□□□□ -0.47
LGR5-206ENST00000550851 PRUNE1Q86TP1 453 aa12.12□□□□□ -0.47
LGR5-206ENST00000550851 LRRC6Q86X45 466 aa12.12□□□□□ -0.47
LGR5-206ENST00000550851 ARRDC4Q8NCT1 418 aa12.12□□□□□ -0.47
LGR5-206ENST00000550851 PTPRN2Q92932 1015 aa12.12□□□□□ -0.47
LGR5-206ENST00000550851 MUC3BQ9H195 1237 aa12.12□□□□□ -0.47
LGR5-206ENST00000550851 ACTR5Q9H9F9 607 aaPredicted RBP12.12□□□□□ -0.47
LGR5-206ENST00000550851 ATRNL1Q5VV63 1379 aa12.12□□□□□ -0.47
LGR5-206ENST00000550851 A0A0B4J269 797 aa12.12□□□□□ -0.47
LGR5-206ENST00000550851 MYBL2P10244 700 aa12.12□□□□□ -0.47
LGR5-206ENST00000550851 AMPD1P23109 780 aa12.12□□□□□ -0.47
LGR5-206ENST00000550851 MAPRE1Q15691 268 aaKnown RBP12.12□□□□□ -0.47
LGR5-206ENST00000550851 WSCD1Q658N2 575 aa12.12□□□□□ -0.47
LGR5-206ENST00000550851 RGMBQ6NW40 437 aa12.12□□□□□ -0.47
LGR5-206ENST00000550851 LVRNQ6Q4G3 990 aa12.12□□□□□ -0.47
LGR5-206ENST00000550851 SPATA21Q7Z572 469 aa12.12□□□□□ -0.47
LGR5-206ENST00000550851 ZNF410Q86VK4 478 aa12.12□□□□□ -0.47
LGR5-206ENST00000550851 DEFB106AQ8N104 65 aa12.12□□□□□ -0.47
LGR5-206ENST00000550851 GBP7Q8N8V2 638 aaPredicted RBP12.12□□□□□ -0.47
LGR5-206ENST00000550851 LRRN4Q8WUT4 740 aa12.12□□□□□ -0.47
LGR5-206ENST00000550851 SOCS4Q8WXH5 440 aa12.12□□□□□ -0.47
LGR5-206ENST00000550851 SGF29Q96ES7 293 aa12.12□□□□□ -0.47
LGR5-206ENST00000550851 SENP8Q96LD8 212 aa12.12□□□□□ -0.47
LGR5-206ENST00000550851 VCXQ9H320 206 aa12.12□□□□□ -0.47
LGR5-206ENST00000550851 XPNPEP1Q9NQW7 623 aa12.12□□□□□ -0.47
LGR5-206ENST00000550851 LMCD1Q9NZU5 365 aa12.12□□□□□ -0.47
LGR5-206ENST00000550851 SALL4Q9UJQ4 1053 aa12.12□□□□□ -0.47
LGR5-206ENST00000550851 KDM3BQ7LBC6 1761 aa12.12□□□□□ -0.47
LGR5-206ENST00000550851 TAC1P20366 129 aa12.12□□□□□ -0.47
LGR5-206ENST00000550851 NNMTP40261 264 aa12.12□□□□□ -0.47
LGR5-206ENST00000550851 YWHAZP63104 245 aaKnown RBP12.12□□□□□ -0.47
LGR5-206ENST00000550851 MCL1Q07820 350 aa12.12□□□□□ -0.47
LGR5-206ENST00000550851 HGSNATQ68CP4 663 aa12.12□□□□□ -0.47
LGR5-206ENST00000550851 ALG3Q92685 438 aa12.12□□□□□ -0.47
LGR5-206ENST00000550851 FAM136AQ96C01 138 aa12.12□□□□□ -0.47
LGR5-206ENST00000550851 GMLQ99445 158 aa12.12□□□□□ -0.47
LGR5-206ENST00000550851 NXF3Q9H4D5 531 aaKnown RBP12.12□□□□□ -0.47
LGR5-206ENST00000550851 GOLGA2P5Q9HBQ8 144 aa12.12□□□□□ -0.47
LGR5-206ENST00000550851 BCAP29Q9UHQ4 241 aa12.12□□□□□ -0.47
LGR5-206ENST00000550851 ATP11BQ9Y2G3 1177 aa12.12□□□□□ -0.47
LGR5-206ENST00000550851 CDY2AQ9Y6F7 541 aa12.12□□□□□ -0.47
LGR5-206ENST00000550851 BDNFP23560 247 aa12.11□□□□□ -0.47
LGR5-206ENST00000550851 FLT3LGP49771 235 aa12.11□□□□□ -0.47
LGR5-206ENST00000550851 HIRAP54198 1017 aaPredicted RBP12.11□□□□□ -0.47
LGR5-206ENST00000550851 KIF19Q2TAC6 998 aa12.11□□□□□ -0.47
LGR5-206ENST00000550851 MTHFD1LQ6UB35 978 aa12.11□□□□□ -0.47
LGR5-206ENST00000550851 TSEN2Q8NCE0 465 aaKnown RBP12.11□□□□□ -0.47
LGR5-206ENST00000550851 SHCBP1Q8NEM2 672 aa12.11□□□□□ -0.47
LGR5-206ENST00000550851 CCDC124Q96CT7 223 aaKnown RBP12.11□□□□□ -0.47
LGR5-206ENST00000550851 STAMBPL1Q96FJ0 436 aa12.11□□□□□ -0.47
LGR5-206ENST00000550851 TSPYL2Q9H2G4 693 aaPredicted RBP12.11□□□□□ -0.47
LGR5-206ENST00000550851 NDFIP2Q9NV92 336 aa12.11□□□□□ -0.47
LGR5-206ENST00000550851 RAB21Q9UL25 225 aa12.11□□□□□ -0.47
LGR5-206ENST00000550851 DCDC2CA8MYV0 355 aa12.11□□□□□ -0.47
LGR5-206ENST00000550851 FZD9O00144 591 aa12.11□□□□□ -0.47
LGR5-206ENST00000550851 PIAS1O75925 651 aa12.11□□□□□ -0.47
LGR5-206ENST00000550851 ALDH1A3P47895 512 aa12.11□□□□□ -0.47
LGR5-206ENST00000550851 TRADDQ15628 312 aa12.11□□□□□ -0.47
LGR5-206ENST00000550851 ANO4Q32M45 955 aa12.11□□□□□ -0.47
LGR5-206ENST00000550851 DAW1Q8N136 415 aa12.11□□□□□ -0.47
LGR5-206ENST00000550851 DDX23Q9BUQ8 820 aaKnown RBP12.11□□□□□ -0.47
LGR5-206ENST00000550851 HACD3Q9P035 362 aa12.11□□□□□ -0.47
LGR5-206ENST00000550851 ZNF142P52746 1687 aaPredicted RBP12.11□□□□□ -0.47
LGR5-206ENST00000550851 UMODL1Q5DID0 1318 aa12.11□□□□□ -0.47
LGR5-206ENST00000550851 POLBP06746 335 aa12.11□□□□□ -0.47
LGR5-206ENST00000550851 CYP2F1P24903 491 aa12.11□□□□□ -0.47
LGR5-206ENST00000550851 LHX1P48742 406 aa12.11□□□□□ -0.47
LGR5-206ENST00000550851 OVGP1Q12889 678 aa12.11□□□□□ -0.47
LGR5-206ENST00000550851 ZNF268Q14587 947 aaPredicted RBP12.11□□□□□ -0.47
LGR5-206ENST00000550851 FRA10AC1Q70Z53 315 aa12.11□□□□□ -0.47
LGR5-206ENST00000550851 C3orf20Q8ND61 904 aa12.11□□□□□ -0.47
LGR5-206ENST00000550851 PCDHB18PQ96TA0 734 aa12.11□□□□□ -0.47
LGR5-206ENST00000550851 COLEC11Q9BWP8 271 aa12.11□□□□□ -0.47
LGR5-206ENST00000550851 DCLK3Q9C098 648 aa12.11□□□□□ -0.47
LGR5-206ENST00000550851 CATSPERBQ9H7T0 1116 aa12.11□□□□□ -0.47
LGR5-206ENST00000550851 GON4LQ3T8J9 2241 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms