RNA–Protein interactions for RNA: ENST00000550589.1

CCDC59-204, Transcript of coiled-coil domain containing 59, humanhuman

TSL 2

Gene CCDC59, Length 2,101 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC59-204ENST00000550589 TOPORSQ9NS56 1045 aaPredicted RBP4.59□□□□□ -1.67
CCDC59-204ENST00000550589 SENP1Q9P0U3 644 aa4.59□□□□□ -1.67
CCDC59-204ENST00000550589 RGS17Q9UGC6 210 aaPredicted RBP4.59□□□□□ -1.67
CCDC59-204ENST00000550589 ZNF148Q9UQR1 794 aa4.59□□□□□ -1.67
CCDC59-204ENST00000550589 DRG1Q9Y295 367 aaKnown RBP4.59□□□□□ -1.67
CCDC59-204ENST00000550589 ACTL7BQ9Y614 415 aa4.59□□□□□ -1.67
CCDC59-204ENST00000550589 MROH7Q68CQ1 1323 aa4.58□□□□□ -1.68
CCDC59-204ENST00000550589 IGKV6-21A0A0C4DH24 114 aa4.58□□□□□ -1.68
CCDC59-204ENST00000550589 STRNO43815 780 aa4.58□□□□□ -1.68
CCDC59-204ENST00000550589 SORBS3O60504 671 aa4.58□□□□□ -1.68
CCDC59-204ENST00000550589 MSCO60682 206 aa4.58□□□□□ -1.68
CCDC59-204ENST00000550589 TCEA3O75764 348 aa4.58□□□□□ -1.68
CCDC59-204ENST00000550589 TTC4O95801 387 aa4.58□□□□□ -1.68
CCDC59-204ENST00000550589 WEE2P0C1S8 567 aa4.58□□□□□ -1.68
CCDC59-204ENST00000550589 TXNP10599 105 aaKnown RBP4.58□□□□□ -1.68
CCDC59-204ENST00000550589 RALAP11233 206 aa4.58□□□□□ -1.68
CCDC59-204ENST00000550589 KRT3P12035 628 aa4.58□□□□□ -1.68
CCDC59-204ENST00000550589 NFKB1P19838 968 aa4.58□□□□□ -1.68
CCDC59-204ENST00000550589 ACO1P21399 889 aaKnown RBP4.58□□□□□ -1.68
CCDC59-204ENST00000550589 BRD2P25440 801 aaKnown RBP4.58□□□□□ -1.68
CCDC59-204ENST00000550589 PTPN7P35236 360 aa4.58□□□□□ -1.68
CCDC59-204ENST00000550589 MMP13P45452 471 aa4.58□□□□□ -1.68
CCDC59-204ENST00000550589 SOX10P56693 466 aa4.58□□□□□ -1.68
CCDC59-204ENST00000550589 CNTN2Q02246 1040 aa4.58□□□□□ -1.68
CCDC59-204ENST00000550589 PPIL2Q13356 520 aa4.58□□□□□ -1.68
CCDC59-204ENST00000550589 PRAMEF18Q5VWM3 479 aa4.58□□□□□ -1.68
CCDC59-204ENST00000550589 LMBRD2Q68DH5 695 aaPredicted RBP4.58□□□□□ -1.68
CCDC59-204ENST00000550589 EFCAB12Q6NXP0 572 aa4.58□□□□□ -1.68
CCDC59-204ENST00000550589 CRELD2Q6UXH1 353 aaPredicted RBP4.58□□□□□ -1.68
CCDC59-204ENST00000550589 PPP1R3FQ6ZSY5 799 aaPredicted RBP4.58□□□□□ -1.68
CCDC59-204ENST00000550589 USP50Q70EL3 339 aaPredicted RBP4.58□□□□□ -1.68
CCDC59-204ENST00000550589 MAP7D3Q8IWC1 876 aa4.58□□□□□ -1.68
CCDC59-204ENST00000550589 THNSL1Q8IYQ7 743 aa4.58□□□□□ -1.68
CCDC59-204ENST00000550589 RGL4Q8IZJ4 473 aa4.58□□□□□ -1.68
CCDC59-204ENST00000550589 MICALL1Q8N3F8 863 aa4.58□□□□□ -1.68
CCDC59-204ENST00000550589 NIPA2Q8N8Q9 360 aa4.58□□□□□ -1.68
CCDC59-204ENST00000550589 OR2W6PQ8NHA6 318 aa4.58□□□□□ -1.68
CCDC59-204ENST00000550589 TRPM4Q8TD43 1214 aa4.58□□□□□ -1.68
CCDC59-204ENST00000550589 TLCD1Q96CP7 247 aa4.58□□□□□ -1.68
CCDC59-204ENST00000550589 GPR20Q99678 358 aa4.58□□□□□ -1.68
CCDC59-204ENST00000550589 SELENOSQ9BQE4 189 aa4.58□□□□□ -1.68
CCDC59-204ENST00000550589 MAK16Q9BXY0 300 aaKnown RBP4.58□□□□□ -1.68
CCDC59-204ENST00000550589 DCLK3Q9C098 648 aa4.58□□□□□ -1.68
CCDC59-204ENST00000550589 CCDC113Q9H0I3 377 aa4.58□□□□□ -1.68
CCDC59-204ENST00000550589 ASCC2Q9H1I8 757 aaPredicted RBP4.58□□□□□ -1.68
CCDC59-204ENST00000550589 NEUROG2Q9H2A3 272 aa4.58□□□□□ -1.68
CCDC59-204ENST00000550589 UBN1Q9NPG3 1134 aa4.58□□□□□ -1.68
CCDC59-204ENST00000550589 CISHQ9NSE2 258 aa4.58□□□□□ -1.68
CCDC59-204ENST00000550589 SLC5A4Q9NY91 659 aa4.58□□□□□ -1.68
CCDC59-204ENST00000550589 NKIRAS1Q9NYS0 192 aa4.58□□□□□ -1.68
CCDC59-204ENST00000550589 GRHL1Q9NZI5 618 aa4.58□□□□□ -1.68
CCDC59-204ENST00000550589 SLC12A6Q9UHW9 1150 aa4.58□□□□□ -1.68
CCDC59-204ENST00000550589 CPSF3Q9UKF6 684 aaKnown RBP4.58□□□□□ -1.68
CCDC59-204ENST00000550589 TNFSF13BQ9Y275 285 aa4.58□□□□□ -1.68
CCDC59-204ENST00000550589 USTQ9Y2C2 406 aa4.58□□□□□ -1.68
CCDC59-204ENST00000550589 NR2E1Q9Y466 385 aa4.58□□□□□ -1.68
CCDC59-204ENST00000550589 GTF3C5Q9Y5Q8 519 aaPredicted RBP4.58□□□□□ -1.68
CCDC59-204ENST00000550589 SNCAIPQ9Y6H5 919 aa4.58□□□□□ -1.68
CCDC59-204ENST00000550589 IVNS1ABPQ9Y6Y0 642 aa4.58□□□□□ -1.68
CCDC59-204ENST00000550589 MYH11P35749 1972 aa4.58□□□□□ -1.68
CCDC59-204ENST00000550589 ZNF541Q9H0D2 1346 aa4.58□□□□□ -1.68
CCDC59-204ENST00000550589 CNTNAP2Q9UHC6 1331 aa4.58□□□□□ -1.68
CCDC59-204ENST00000550589 TMEM191CA6NGB0 347 aa4.58□□□□□ -1.68
CCDC59-204ENST00000550589 SIGLEC16A6NMB1 481 aa4.58□□□□□ -1.68
CCDC59-204ENST00000550589 CAND2O75155 1236 aa4.58□□□□□ -1.68
CCDC59-204ENST00000550589 VNN1O95497 513 aa4.58□□□□□ -1.68
CCDC59-204ENST00000550589 ALBP02768 609 aa4.58□□□□□ -1.68
CCDC59-204ENST00000550589 HMGCRP04035 888 aa4.58□□□□□ -1.68
CCDC59-204ENST00000550589 KRT19P08727 400 aa4.58□□□□□ -1.68
CCDC59-204ENST00000550589 MCF2P10911 925 aa4.58□□□□□ -1.68
CCDC59-204ENST00000550589 CD19P15391 556 aa4.58□□□□□ -1.68
CCDC59-204ENST00000550589 ATF7P17544 494 aaPredicted RBP4.58□□□□□ -1.68
CCDC59-204ENST00000550589 AMPD1P23109 780 aa4.58□□□□□ -1.68
CCDC59-204ENST00000550589 STIP1P31948 543 aaKnown RBP4.58□□□□□ -1.68
CCDC59-204ENST00000550589 CDH5P33151 784 aaPredicted RBP4.58□□□□□ -1.68
CCDC59-204ENST00000550589 FLT3P36888 993 aa4.58□□□□□ -1.68
CCDC59-204ENST00000550589 ADH7P40394 386 aa4.58□□□□□ -1.68
CCDC59-204ENST00000550589 MARCKSL1P49006 195 aa4.58□□□□□ -1.68
CCDC59-204ENST00000550589 ZNF132P52740 706 aa4.58□□□□□ -1.68
CCDC59-204ENST00000550589 MYO1EQ12965 1108 aa4.58□□□□□ -1.68
CCDC59-204ENST00000550589 SNAPC2Q13487 334 aa4.58□□□□□ -1.68
CCDC59-204ENST00000550589 ZNF268Q14587 947 aaPredicted RBP4.58□□□□□ -1.68
CCDC59-204ENST00000550589 MORF4L2Q15014 288 aa4.58□□□□□ -1.68
CCDC59-204ENST00000550589 FAM187BQ17R55 369 aa4.58□□□□□ -1.68
CCDC59-204ENST00000550589 LY6KQ17RY6 165 aa4.58□□□□□ -1.68
CCDC59-204ENST00000550589 TREML2Q5T2D2 321 aa4.58□□□□□ -1.68
CCDC59-204ENST00000550589 ERMARDQ5T6L9 678 aa4.58□□□□□ -1.68
CCDC59-204ENST00000550589 RNF187Q5TA31 235 aaPredicted RBP4.58□□□□□ -1.68
CCDC59-204ENST00000550589 TTC19Q6DKK2 380 aaPredicted RBP4.58□□□□□ -1.68
CCDC59-204ENST00000550589 ZDHHC24Q6UX98 284 aa4.58□□□□□ -1.68
CCDC59-204ENST00000550589 MMS22LQ6ZRQ5 1243 aa4.58□□□□□ -1.68
CCDC59-204ENST00000550589 CENPUQ71F23 418 aa4.58□□□□□ -1.68
CCDC59-204ENST00000550589 CCDC197Q8NCU1 140 aa4.58□□□□□ -1.68
CCDC59-204ENST00000550589 C1orf54Q8WWF1 131 aa4.58□□□□□ -1.68
CCDC59-204ENST00000550589 GRAMD1AQ96CP6 724 aa4.58□□□□□ -1.68
CCDC59-204ENST00000550589 HAUS1Q96CS2 278 aa4.58□□□□□ -1.68
CCDC59-204ENST00000550589 SGSM3Q96HU1 749 aa4.58□□□□□ -1.68
CCDC59-204ENST00000550589 ZBTB45Q96K62 511 aaPredicted RBP4.58□□□□□ -1.68
CCDC59-204ENST00000550589 NLRP4Q96MN2 994 aa4.58□□□□□ -1.68
CCDC59-204ENST00000550589 XPO6Q96QU8 1125 aaKnown RBP4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms