RNA–Protein interactions for RNA: ENST00000550253.1

TGFBR1-208, Transcript of transforming growth factor beta receptor 1, humanhuman

TSL 2 BASIC

Gene TGFBR1, Length 1,538 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR1-208ENST00000550253 PLEKHM1Q9Y4G2 1056 aa7.01□□□□□ -1.29
TGFBR1-208ENST00000550253 RBM8AQ9Y5S9 174 aaKnown RBP7.01□□□□□ -1.29
TGFBR1-208ENST00000550253 ANKRD31Q8N7Z5 1873 aa7.01□□□□□ -1.29
TGFBR1-208ENST00000550253 COL11A2P13942 1736 aaPredicted RBP7.01□□□□□ -1.29
TGFBR1-208ENST00000550253 A6NCN8 305 aa7.01□□□□□ -1.29
TGFBR1-208ENST00000550253 RPS6KA4O75676 772 aa7.01□□□□□ -1.29
TGFBR1-208ENST00000550253 RAP2AP10114 183 aa7.01□□□□□ -1.29
TGFBR1-208ENST00000550253 EGR1P18146 543 aa7.01□□□□□ -1.29
TGFBR1-208ENST00000550253 CST5P28325 142 aaPredicted RBP7.01□□□□□ -1.29
TGFBR1-208ENST00000550253 LIFRP42702 1097 aa7.01□□□□□ -1.29
TGFBR1-208ENST00000550253 NCKAP1LP55160 1127 aa7.01□□□□□ -1.29
TGFBR1-208ENST00000550253 PCOLCEQ15113 449 aa7.01□□□□□ -1.29
TGFBR1-208ENST00000550253 YAF2Q8IY57 180 aa7.01□□□□□ -1.29
TGFBR1-208ENST00000550253 C1orf131Q8NDD1 294 aaKnown RBP7.01□□□□□ -1.29
TGFBR1-208ENST00000550253 RUBCNQ92622 972 aa7.01□□□□□ -1.29
TGFBR1-208ENST00000550253 SPSB4Q96A44 273 aa7.01□□□□□ -1.29
TGFBR1-208ENST00000550253 ERP27Q96DN0 273 aa7.01□□□□□ -1.29
TGFBR1-208ENST00000550253 NDC1Q9BTX1 674 aa7.01□□□□□ -1.29
TGFBR1-208ENST00000550253 JKAMPQ9P055 326 aa7.01□□□□□ -1.29
TGFBR1-208ENST00000550253 POLG2Q9UHN1 485 aa7.01□□□□□ -1.29
TGFBR1-208ENST00000550253 CAPN11Q9UMQ6 739 aa7.01□□□□□ -1.29
TGFBR1-208ENST00000550253 USP42Q9H9J4 1324 aaKnown RBP7□□□□□ -1.29
TGFBR1-208ENST00000550253 TCRBV7S2A1N4TA0A589 114 aa7□□□□□ -1.29
TGFBR1-208ENST00000550253 ADAMTS4O75173 837 aa7□□□□□ -1.29
TGFBR1-208ENST00000550253 RASSF9O75901 435 aa7□□□□□ -1.29
TGFBR1-208ENST00000550253 SOAT2O75908 522 aa7□□□□□ -1.29
TGFBR1-208ENST00000550253 GNAI2P04899 355 aa7□□□□□ -1.29
TGFBR1-208ENST00000550253 GRPP07492 148 aa7□□□□□ -1.29
TGFBR1-208ENST00000550253 ATP1A3P13637 1013 aa7□□□□□ -1.29
TGFBR1-208ENST00000550253 IGFBP6P24592 240 aaPredicted RBP7□□□□□ -1.29
TGFBR1-208ENST00000550253 ADD2P35612 726 aa7□□□□□ -1.29
TGFBR1-208ENST00000550253 ZEB1P37275 1124 aaPredicted RBP7□□□□□ -1.29
TGFBR1-208ENST00000550253 CASRP41180 1078 aa7□□□□□ -1.29
TGFBR1-208ENST00000550253 TNNT2P45379 298 aaPredicted RBP7□□□□□ -1.29
TGFBR1-208ENST00000550253 MRE11P49959 708 aa7□□□□□ -1.29
TGFBR1-208ENST00000550253 TLE2Q04725 743 aa7□□□□□ -1.29
TGFBR1-208ENST00000550253 PDE1CQ14123 709 aaPredicted RBP7□□□□□ -1.29
TGFBR1-208ENST00000550253 MAPKAPK3Q16644 382 aa7□□□□□ -1.29
TGFBR1-208ENST00000550253 ADCK5Q3MIX3 580 aa7□□□□□ -1.29
TGFBR1-208ENST00000550253 PRR31Q5SQ13 230 aa7□□□□□ -1.29
TGFBR1-208ENST00000550253 GPATCH4Q5T3I0 446 aaKnown RBP7□□□□□ -1.29
TGFBR1-208ENST00000550253 ERICH6BQ5W0A0 696 aa7□□□□□ -1.29
TGFBR1-208ENST00000550253 TRMT10BQ6PF06 316 aaKnown RBP7□□□□□ -1.29
TGFBR1-208ENST00000550253 USP17L6PQ6QN14 398 aa7□□□□□ -1.29
TGFBR1-208ENST00000550253 ZDHHC24Q6UX98 284 aa7□□□□□ -1.29
TGFBR1-208ENST00000550253 GCDHQ92947 438 aaPredicted RBP7□□□□□ -1.29
TGFBR1-208ENST00000550253 LPPQ93052 612 aa7□□□□□ -1.29
TGFBR1-208ENST00000550253 SLC7A6OSQ96CW6 309 aaPredicted RBP7□□□□□ -1.29
TGFBR1-208ENST00000550253 ZBTB10Q96DT7 871 aa7□□□□□ -1.29
TGFBR1-208ENST00000550253 PRPF18Q99633 342 aaKnown RBP7□□□□□ -1.29
TGFBR1-208ENST00000550253 DDX23Q9BUQ8 820 aaKnown RBP7□□□□□ -1.29
TGFBR1-208ENST00000550253 PACSIN1Q9BY11 444 aa7□□□□□ -1.29
TGFBR1-208ENST00000550253 ENKD1Q9H0I2 346 aa7□□□□□ -1.29
TGFBR1-208ENST00000550253 TBC1D22BQ9NU19 505 aa7□□□□□ -1.29
TGFBR1-208ENST00000550253 RNF181Q9P0P0 153 aa7□□□□□ -1.29
TGFBR1-208ENST00000550253 SLC45A2Q9UMX9 530 aa7□□□□□ -1.29
TGFBR1-208ENST00000550253 CACNA1SQ13698 1873 aa6.99□□□□□ -1.29
TGFBR1-208ENST00000550253 PLEKHG2Q9H7P9 1386 aa6.99□□□□□ -1.29
TGFBR1-208ENST00000550253 UBR2Q8IWV8 1755 aa6.99□□□□□ -1.29
TGFBR1-208ENST00000550253 ERVV-2B6SEH9 535 aa6.99□□□□□ -1.29
TGFBR1-208ENST00000550253 POLRMTO00411 1230 aaKnown RBP6.99□□□□□ -1.29
TGFBR1-208ENST00000550253 KIAA0391O15091 583 aaKnown RBP6.99□□□□□ -1.29
TGFBR1-208ENST00000550253 ITGA2BP08514 1039 aa6.99□□□□□ -1.29
TGFBR1-208ENST00000550253 VSIG10L2P0DP72 767 aa6.99□□□□□ -1.29
TGFBR1-208ENST00000550253 CKBP12277 381 aa6.99□□□□□ -1.29
TGFBR1-208ENST00000550253 XBP1P17861 261 aa6.99□□□□□ -1.29
TGFBR1-208ENST00000550253 HMGB2P26583 209 aaKnown RBP6.99□□□□□ -1.29
TGFBR1-208ENST00000550253 SSTR4P31391 388 aa6.99□□□□□ -1.29
TGFBR1-208ENST00000550253 RFC4P35249 363 aa6.99□□□□□ -1.29
TGFBR1-208ENST00000550253 KRT9P35527 623 aa6.99□□□□□ -1.29
TGFBR1-208ENST00000550253 CRKLP46109 303 aaKnown RBP6.99□□□□□ -1.29
TGFBR1-208ENST00000550253 MEOX1P50221 254 aa6.99□□□□□ -1.29
TGFBR1-208ENST00000550253 POLE2P56282 527 aa6.99□□□□□ -1.29
TGFBR1-208ENST00000550253 SRSF3P84103 164 aaKnown RBP6.99□□□□□ -1.29
TGFBR1-208ENST00000550253 TMTC4Q5T4D3 741 aa6.99□□□□□ -1.29
TGFBR1-208ENST00000550253 KLHL17Q6TDP4 642 aa6.99□□□□□ -1.29
TGFBR1-208ENST00000550253 ZNF365Q70YC5 407 aa6.99□□□□□ -1.29
TGFBR1-208ENST00000550253 GATAD2AQ86YP4 633 aa6.99□□□□□ -1.29
TGFBR1-208ENST00000550253 C2CD5Q86YS7 1000 aa6.99□□□□□ -1.29
TGFBR1-208ENST00000550253 MRI1Q9BV20 369 aa6.99□□□□□ -1.29
TGFBR1-208ENST00000550253 HEYLQ9NQ87 328 aaPredicted RBP6.99□□□□□ -1.29
TGFBR1-208ENST00000550253 USP40Q9NVE5 1235 aa6.99□□□□□ -1.29
TGFBR1-208ENST00000550253 HDAC9Q9UKV0 1011 aa6.99□□□□□ -1.29
TGFBR1-208ENST00000550253 ZMYND8Q9ULU4 1186 aaPredicted RBP6.99□□□□□ -1.29
TGFBR1-208ENST00000550253 AGAP1Q9UPQ3 857 aa6.99□□□□□ -1.29
TGFBR1-208ENST00000550253 TMX2Q9Y320 296 aa6.99□□□□□ -1.29
TGFBR1-208ENST00000550253 CARMIL3Q8ND23 1372 aa6.99□□□□□ -1.29
TGFBR1-208ENST00000550253 DICER1Q9UPY3 1922 aaKnown RBP6.98□□□□□ -1.29
TGFBR1-208ENST00000550253 FER1L6Q2WGJ9 1857 aa6.98□□□□□ -1.29
TGFBR1-208ENST00000550253 JUNP05412 331 aaKnown RBP6.98□□□□□ -1.29
TGFBR1-208ENST00000550253 IDEP14735 1019 aa6.98□□□□□ -1.29
TGFBR1-208ENST00000550253 NPPBP16860 134 aa6.98□□□□□ -1.29
TGFBR1-208ENST00000550253 ITGB5P18084 799 aa6.98□□□□□ -1.29
TGFBR1-208ENST00000550253 TM4SF1P30408 202 aa6.98□□□□□ -1.29
TGFBR1-208ENST00000550253 PSMC1P62191 440 aaKnown RBP6.98□□□□□ -1.29
TGFBR1-208ENST00000550253 ADAM8P78325 824 aa6.98□□□□□ -1.29
TGFBR1-208ENST00000550253 MXRA7P84157 204 aa6.98□□□□□ -1.29
TGFBR1-208ENST00000550253 APBA1Q02410 837 aa6.98□□□□□ -1.29
TGFBR1-208ENST00000550253 DUSP8Q13202 625 aa6.98□□□□□ -1.29
TGFBR1-208ENST00000550253 CRB2Q5IJ48 1285 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms