RNA–Protein interactions for RNA: ENST00000550219.1

NUP188-211, Transcript of nucleoporin 188, humanhuman

TSL 1 (best)

Gene NUP188, Length 886 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-211ENST00000550219 PDGFRLQ15198 375 aa14.29□□□□□ -0.12
NUP188-211ENST00000550219 ZNF77Q15935 545 aa14.29□□□□□ -0.12
NUP188-211ENST00000550219 MDH1BQ5I0G3 518 aa14.29□□□□□ -0.12
NUP188-211ENST00000550219 TRAPPC11Q7Z392 1133 aa14.29□□□□□ -0.12
NUP188-211ENST00000550219 CPA6Q8N4T0 437 aa14.29□□□□□ -0.12
NUP188-211ENST00000550219 ARL14EPQ8N8R7 260 aaPredicted RBP14.29□□□□□ -0.12
NUP188-211ENST00000550219 CHFRQ96EP1 664 aa14.29□□□□□ -0.12
NUP188-211ENST00000550219 CYP2S1Q96SQ9 504 aa14.29□□□□□ -0.12
NUP188-211ENST00000550219 MRPL45Q9BRJ2 306 aaKnown RBP14.29□□□□□ -0.12
NUP188-211ENST00000550219 SNX25Q9H3E2 840 aa14.29□□□□□ -0.12
NUP188-211ENST00000550219 DUS2Q9NX74 493 aaKnown RBP14.29□□□□□ -0.12
NUP188-211ENST00000550219 DYNC1LI1Q9Y6G9 523 aaKnown RBP14.29□□□□□ -0.12
NUP188-211ENST00000550219 EP300Q09472 2414 aaPredicted RBP14.29□□□□□ -0.12
NUP188-211ENST00000550219 SPTBN4Q9H254 2564 aa14.29□□□□□ -0.12
NUP188-211ENST00000550219 F5P12259 2224 aa14.28□□□□□ -0.12
NUP188-211ENST00000550219 RPL13P26373 211 aaKnown RBP14.28□□□□□ -0.12
NUP188-211ENST00000550219 MAGEA11P43364 429 aa14.28□□□□□ -0.12
NUP188-211ENST00000550219 MCCD1P59942 119 aaPredicted RBP14.28□□□□□ -0.12
NUP188-211ENST00000550219 MYL5Q02045 173 aa14.28□□□□□ -0.12
NUP188-211ENST00000550219 CYP24A1Q07973 514 aa14.28□□□□□ -0.12
NUP188-211ENST00000550219 ADAM9Q13443 819 aa14.28□□□□□ -0.12
NUP188-211ENST00000550219 ZNF268Q14587 947 aaPredicted RBP14.28□□□□□ -0.12
NUP188-211ENST00000550219 ZNF638Q14966 1978 aaKnown RBP14.28□□□□□ -0.12
NUP188-211ENST00000550219 PSMD6Q15008 389 aa14.28□□□□□ -0.12
NUP188-211ENST00000550219 MAPRE1Q15691 268 aaKnown RBP14.28□□□□□ -0.12
NUP188-211ENST00000550219 TMEM196Q5HYL7 178 aa14.28□□□□□ -0.12
NUP188-211ENST00000550219 FAM171BQ6P995 826 aa14.28□□□□□ -0.12
NUP188-211ENST00000550219 DPH6Q7L8W6 267 aa14.28□□□□□ -0.12
NUP188-211ENST00000550219 DHX40Q8IX18 779 aaKnown RBP14.28□□□□□ -0.12
NUP188-211ENST00000550219 SYNPOQ8N3V7 929 aa14.28□□□□□ -0.12
NUP188-211ENST00000550219 XXYLT1Q8NBI6 393 aa14.28□□□□□ -0.12
NUP188-211ENST00000550219 OR6B3Q8NGW1 331 aa14.28□□□□□ -0.12
NUP188-211ENST00000550219 SH3RF2Q8TEC5 729 aa14.28□□□□□ -0.12
NUP188-211ENST00000550219 PCED1BQ96HM7 432 aa14.28□□□□□ -0.12
NUP188-211ENST00000550219 MYRFLQ96LU7 910 aa14.28□□□□□ -0.12
NUP188-211ENST00000550219 CEP63Q96MT8 703 aa14.28□□□□□ -0.12
NUP188-211ENST00000550219 CBX8Q9HC52 389 aa14.28□□□□□ -0.12
NUP188-211ENST00000550219 POLR3BQ9NW08 1133 aaPredicted RBP14.28□□□□□ -0.12
NUP188-211ENST00000550219 SLC8A2Q9UPR5 921 aa14.28□□□□□ -0.12
NUP188-211ENST00000550219 GPR179Q6PRD1 2367 aa14.27□□□□□ -0.12
NUP188-211ENST00000550219 SMTNL1A8MU46 457 aa14.27□□□□□ -0.13
NUP188-211ENST00000550219 PRR5-ARHGAP8B1AHC4 643 aa14.27□□□□□ -0.13
NUP188-211ENST00000550219 CETN3O15182 167 aa14.27□□□□□ -0.13
NUP188-211ENST00000550219 MAPK13O15264 365 aa14.27□□□□□ -0.13
NUP188-211ENST00000550219 RETP07949 1114 aa14.27□□□□□ -0.13
NUP188-211ENST00000550219 TGM1P22735 817 aa14.27□□□□□ -0.13
NUP188-211ENST00000550219 NR2F2P24468 414 aa14.27□□□□□ -0.13
NUP188-211ENST00000550219 GJA4P35212 333 aa14.27□□□□□ -0.13
NUP188-211ENST00000550219 USP46P62068 366 aa14.27□□□□□ -0.13
NUP188-211ENST00000550219 ARHGAP8P85298 464 aa14.27□□□□□ -0.13
NUP188-211ENST00000550219 AMPD2Q01433 879 aa14.27□□□□□ -0.13
NUP188-211ENST00000550219 TRPC3Q13507 836 aa14.27□□□□□ -0.13
NUP188-211ENST00000550219 VSTM1Q6UX27 236 aa14.27□□□□□ -0.13
NUP188-211ENST00000550219 DENND5BQ6ZUT9 1274 aa14.27□□□□□ -0.13
NUP188-211ENST00000550219 FILIP1Q7Z7B0 1213 aa14.27□□□□□ -0.13
NUP188-211ENST00000550219 WDR5BQ86VZ2 330 aa14.27□□□□□ -0.13
NUP188-211ENST00000550219 GAS2L3Q86XJ1 694 aa14.27□□□□□ -0.13
NUP188-211ENST00000550219 FAM160A2Q8N612 972 aaPredicted RBP14.27□□□□□ -0.13
NUP188-211ENST00000550219 OSCP1Q8WVF1 389 aa14.27□□□□□ -0.13
NUP188-211ENST00000550219 HHIPQ96QV1 700 aa14.27□□□□□ -0.13
NUP188-211ENST00000550219 P2RY13Q9BPV8 354 aa14.27□□□□□ -0.13
NUP188-211ENST00000550219 HSD3B7Q9H2F3 369 aa14.27□□□□□ -0.13
NUP188-211ENST00000550219 DPEP3Q9H4B8 488 aa14.27□□□□□ -0.13
NUP188-211ENST00000550219 ECT2Q9H8V3 914 aa14.27□□□□□ -0.13
NUP188-211ENST00000550219 NXF1Q9UBU9 619 aaKnown RBP14.27□□□□□ -0.13
NUP188-211ENST00000550219 NME7Q9Y5B8 376 aa14.27□□□□□ -0.13
NUP188-211ENST00000550219 DCHS1Q96JQ0 3298 aa14.26□□□□□ -0.13
NUP188-211ENST00000550219 ZNF292O60281 2723 aa14.26□□□□□ -0.13
NUP188-211ENST00000550219 DCDC2BA2VCK2 349 aa14.26□□□□□ -0.13
NUP188-211ENST00000550219 SOBPA7XYQ1 873 aa14.26□□□□□ -0.13
NUP188-211ENST00000550219 F8VP50 259 aa14.26□□□□□ -0.13
NUP188-211ENST00000550219 TRDMT1O14717 391 aaKnown RBP14.26□□□□□ -0.13
NUP188-211ENST00000550219 SCAMP3O14828 347 aaKnown RBP14.26□□□□□ -0.13
NUP188-211ENST00000550219 TRIM66O15016 1216 aa14.26□□□□□ -0.13
NUP188-211ENST00000550219 EXOC3O60645 756 aa14.26□□□□□ -0.13
NUP188-211ENST00000550219 PHACTR2O75167 634 aa14.26□□□□□ -0.13
NUP188-211ENST00000550219 FGFR1OPO95684 399 aaKnown RBP14.26□□□□□ -0.13
NUP188-211ENST00000550219 ABL1P00519 1130 aa14.26□□□□□ -0.13
NUP188-211ENST00000550219 CST3P01034 146 aaPredicted RBP14.26□□□□□ -0.13
NUP188-211ENST00000550219 HDCP19113 662 aa14.26□□□□□ -0.13
NUP188-211ENST00000550219 SDHBP21912 280 aa14.26□□□□□ -0.13
NUP188-211ENST00000550219 KCNA4P22459 653 aa14.26□□□□□ -0.13
NUP188-211ENST00000550219 CNR2P34972 360 aa14.26□□□□□ -0.13
NUP188-211ENST00000550219 CASP4P49662 377 aa14.26□□□□□ -0.13
NUP188-211ENST00000550219 ATXN1P54253 815 aaKnown RBP14.26□□□□□ -0.13
NUP188-211ENST00000550219 MYL6P60660 151 aa14.26□□□□□ -0.13
NUP188-211ENST00000550219 BIRC3Q13489 604 aa14.26□□□□□ -0.13
NUP188-211ENST00000550219 WDR72Q3MJ13 1102 aa14.26□□□□□ -0.13
NUP188-211ENST00000550219 SCARA5Q6ZMJ2 495 aa14.26□□□□□ -0.13
NUP188-211ENST00000550219 LIMS2Q7Z4I7 341 aa14.26□□□□□ -0.13
NUP188-211ENST00000550219 IRF2BP1Q8IU81 584 aa14.26□□□□□ -0.13
NUP188-211ENST00000550219 AOPEPQ8N6M6 819 aa14.26□□□□□ -0.13
NUP188-211ENST00000550219 RPLP0P6Q8NHW5 317 aa14.26□□□□□ -0.13
NUP188-211ENST00000550219 MYCBPAPQ8TBZ2 947 aa14.26□□□□□ -0.13
NUP188-211ENST00000550219 CD101Q93033 1021 aa14.26□□□□□ -0.13
NUP188-211ENST00000550219 ATP2A3Q93084 1043 aa14.26□□□□□ -0.13
NUP188-211ENST00000550219 SRRTQ9BXP5 876 aaKnown RBP14.26□□□□□ -0.13
NUP188-211ENST00000550219 ZNF518BQ9C0D4 1074 aa14.26□□□□□ -0.13
NUP188-211ENST00000550219 THAP9Q9H5L6 903 aa14.26□□□□□ -0.13
NUP188-211ENST00000550219 FBRSL1Q9HCM7 1045 aaKnown RBP14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms