RNA–Protein interactions for RNA: ENST00000550075.5

CPSF6-205, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 4

Gene CPSF6, Length 540 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-205ENST00000550075 ANAPC1Q9H1A4 1944 aa27.45■■□□□ 1.98
CPSF6-205ENST00000550075 NCANO14594 1321 aa27.44■■□□□ 1.98
CPSF6-205ENST00000550075 TNFRSF10BO14763 440 aa27.44■■□□□ 1.98
CPSF6-205ENST00000550075 PRAMEF12O95522 483 aa27.44■■□□□ 1.98
CPSF6-205ENST00000550075 VDRP11473 427 aa27.44■■□□□ 1.98
CPSF6-205ENST00000550075 RFX1P22670 979 aa27.44■■□□□ 1.98
CPSF6-205ENST00000550075 FBXL6Q8N531 539 aa27.44■■□□□ 1.98
CPSF6-205ENST00000550075 ANKRD20A12PQ8NF67 263 aa27.44■■□□□ 1.98
CPSF6-205ENST00000550075 IRF7Q92985 503 aa27.44■■□□□ 1.98
CPSF6-205ENST00000550075 HESX1Q9UBX0 185 aa27.44■■□□□ 1.98
CPSF6-205ENST00000550075 CA14Q9ULX7 337 aa27.44■■□□□ 1.98
CPSF6-205ENST00000550075 MYO16Q9Y6X6 1858 aa27.43■■□□□ 1.98
CPSF6-205ENST00000550075 ZNF263O14978 683 aa27.43■■□□□ 1.98
CPSF6-205ENST00000550075 LETM1O95202 739 aaPredicted RBP27.43■■□□□ 1.98
CPSF6-205ENST00000550075 ACO1P21399 889 aaKnown RBP27.43■■□□□ 1.98
CPSF6-205ENST00000550075 GDI1P31150 447 aa27.43■■□□□ 1.98
CPSF6-205ENST00000550075 MFAP3P55082 362 aa27.43■■□□□ 1.98
CPSF6-205ENST00000550075 ZNF268Q14587 947 aaPredicted RBP27.43■■□□□ 1.98
CPSF6-205ENST00000550075 RBBP8NLQ8NC74 664 aaPredicted RBP27.43■■□□□ 1.98
CPSF6-205ENST00000550075 KAT5Q92993 513 aa27.43■■□□□ 1.98
CPSF6-205ENST00000550075 SHDQ96IW2 340 aa27.43■■□□□ 1.98
CPSF6-205ENST00000550075 UBE2TQ9NPD8 197 aaPredicted RBP27.43■■□□□ 1.98
CPSF6-205ENST00000550075 TDP1Q9NUW8 608 aa27.43■■□□□ 1.98
CPSF6-205ENST00000550075 THG1LQ9NWX6 298 aaKnown RBP27.43■■□□□ 1.98
CPSF6-205ENST00000550075 APEX2Q9UBZ4 518 aa27.43■■□□□ 1.98
CPSF6-205ENST00000550075 ZNF840PA6NDX5 716 aa27.42■■□□□ 1.98
CPSF6-205ENST00000550075 BEST1O76090 585 aa27.42■■□□□ 1.98
CPSF6-205ENST00000550075 ABL1P00519 1130 aa27.42■■□□□ 1.98
CPSF6-205ENST00000550075 BCAT1P54687 386 aa27.42■■□□□ 1.98
CPSF6-205ENST00000550075 FCHO2Q0JRZ9 810 aa27.42■■□□□ 1.98
CPSF6-205ENST00000550075 STILQ15468 1287 aa27.42■■□□□ 1.98
CPSF6-205ENST00000550075 GOLGA7BQ2TAP0 167 aa27.42■■□□□ 1.98
CPSF6-205ENST00000550075 ARHGAP29Q52LW3 1261 aa27.42■■□□□ 1.98
CPSF6-205ENST00000550075 CDKAL1Q5VV42 579 aa27.42■■□□□ 1.98
CPSF6-205ENST00000550075 PHLDB3Q6NSJ2 640 aa27.42■■□□□ 1.98
CPSF6-205ENST00000550075 SCAMP5Q8TAC9 235 aa27.42■■□□□ 1.98
CPSF6-205ENST00000550075 BPIFB1Q8TDL5 484 aa27.42■■□□□ 1.98
CPSF6-205ENST00000550075 IL37Q9NZH6 218 aa27.42■■□□□ 1.98
CPSF6-205ENST00000550075 CHADO15335 359 aa27.41■■□□□ 1.98
CPSF6-205ENST00000550075 KRT5P13647 590 aa27.41■■□□□ 1.98
CPSF6-205ENST00000550075 PLCB2Q00722 1185 aa27.41■■□□□ 1.98
CPSF6-205ENST00000550075 MIIPQ5JXC2 388 aa27.41■■□□□ 1.98
CPSF6-205ENST00000550075 ANKRD52Q8NB46 1076 aa27.41■■□□□ 1.98
CPSF6-205ENST00000550075 RSPRY1Q96DX4 576 aa27.41■■□□□ 1.98
CPSF6-205ENST00000550075 KREMEN1Q96MU8 473 aa27.41■■□□□ 1.98
CPSF6-205ENST00000550075 SMG9Q9H0W8 520 aaKnown RBP27.41■■□□□ 1.98
CPSF6-205ENST00000550075 TSPAN16Q9UKR8 245 aa27.41■■□□□ 1.98
CPSF6-205ENST00000550075 ZDBF2Q9HCK1 2354 aa27.41■■□□□ 1.98
CPSF6-205ENST00000550075 HELZP42694 1942 aaKnown RBP27.4■■□□□ 1.98
CPSF6-205ENST00000550075 FAM92AA1XBS5 289 aa27.4■■□□□ 1.98
CPSF6-205ENST00000550075 C2orf78A6NCI8 922 aa27.4■■□□□ 1.98
CPSF6-205ENST00000550075 HDCP19113 662 aa27.4■■□□□ 1.98
CPSF6-205ENST00000550075 SLC9A1P19634 815 aa27.4■■□□□ 1.98
CPSF6-205ENST00000550075 PRKCQQ04759 706 aa27.4■■□□□ 1.98
CPSF6-205ENST00000550075 MLF2Q15773 248 aaPredicted RBP27.4■■□□□ 1.98
CPSF6-205ENST00000550075 SMYD5Q6GMV2 418 aa27.4■■□□□ 1.98
CPSF6-205ENST00000550075 GPIHBP1Q8IV16 184 aa27.4■■□□□ 1.98
CPSF6-205ENST00000550075 USP13Q92995 863 aaPredicted RBP27.4■■□□□ 1.98
CPSF6-205ENST00000550075 TRPV5Q9NQA5 729 aa27.4■■□□□ 1.98
CPSF6-205ENST00000550075 SETSIPP0DME0 302 aa27.39■■□□□ 1.98
CPSF6-205ENST00000550075 PON1P27169 355 aa27.39■■□□□ 1.98
CPSF6-205ENST00000550075 BST2Q10589 180 aaKnown RBP27.39■■□□□ 1.98
CPSF6-205ENST00000550075 SKOR2Q2VWA4 1001 aaPredicted RBP27.39■■□□□ 1.98
CPSF6-205ENST00000550075 ANO6Q4KMQ2 910 aa27.39■■□□□ 1.98
CPSF6-205ENST00000550075 ARL14EPQ8N8R7 260 aaPredicted RBP27.39■■□□□ 1.98
CPSF6-205ENST00000550075 UBXN6Q9BZV1 441 aa27.39■■□□□ 1.98
CPSF6-205ENST00000550075 TLR8Q9NR97 1041 aaKnown RBP27.39■■□□□ 1.98
CPSF6-205ENST00000550075 FANCLQ9NW38 375 aa27.39■■□□□ 1.98
CPSF6-205ENST00000550075 TAB2Q9NYJ8 693 aa27.39■■□□□ 1.98
CPSF6-205ENST00000550075 GMIPQ9P107 970 aa27.39■■□□□ 1.98
CPSF6-205ENST00000550075 KRBA1A5PL33 1030 aa27.38■■□□□ 1.97
CPSF6-205ENST00000550075 HHLA1C9JL84 531 aa27.38■■□□□ 1.97
CPSF6-205ENST00000550075 O00370 1275 aa27.38■■□□□ 1.97
CPSF6-205ENST00000550075 PDGFBP01127 241 aaPredicted RBP27.38■■□□□ 1.97
CPSF6-205ENST00000550075 TUBP50607 506 aa27.38■■□□□ 1.97
CPSF6-205ENST00000550075 ZNF132P52740 706 aa27.38■■□□□ 1.97
CPSF6-205ENST00000550075 SLC44A4Q53GD3 710 aa27.38■■□□□ 1.97
CPSF6-205ENST00000550075 CC2D1AQ6P1N0 951 aaPredicted RBP27.38■■□□□ 1.97
CPSF6-205ENST00000550075 FLCNQ8NFG4 579 aa27.38■■□□□ 1.97
CPSF6-205ENST00000550075 CSGALNACT1Q8TDX6 532 aa27.38■■□□□ 1.97
CPSF6-205ENST00000550075 ARHGAP26Q9UNA1 814 aa27.38■■□□□ 1.97
CPSF6-205ENST00000550075 CNTN6Q9UQ52 1028 aa27.38■■□□□ 1.97
CPSF6-205ENST00000550075 SCML2Q9UQR0 700 aa27.38■■□□□ 1.97
CPSF6-205ENST00000550075 KIF26AQ9ULI4 1882 aaPredicted RBP27.38■■□□□ 1.97
CPSF6-205ENST00000550075 STK25O00506 426 aa27.37■■□□□ 1.97
CPSF6-205ENST00000550075 OAS1P00973 400 aaKnown RBP27.37■■□□□ 1.97
CPSF6-205ENST00000550075 USP4Q13107 963 aa27.37■■□□□ 1.97
CPSF6-205ENST00000550075 KRT31Q15323 416 aa27.37■■□□□ 1.97
CPSF6-205ENST00000550075 FKBP15Q5T1M5 1219 aa27.37■■□□□ 1.97
CPSF6-205ENST00000550075 HECTD3Q5T447 861 aa27.37■■□□□ 1.97
CPSF6-205ENST00000550075 SNX30Q5VWJ9 437 aa27.37■■□□□ 1.97
CPSF6-205ENST00000550075 LCLAT1Q6UWP7 414 aa27.37■■□□□ 1.97
CPSF6-205ENST00000550075 GPRIN1Q7Z2K8 1008 aa27.37■■□□□ 1.97
CPSF6-205ENST00000550075 TTC30AQ86WT1 665 aa27.37■■□□□ 1.97
CPSF6-205ENST00000550075 AOPEPQ8N6M6 819 aa27.37■■□□□ 1.97
CPSF6-205ENST00000550075 BPIFA3Q9BQP9 254 aa27.37■■□□□ 1.97
CPSF6-205ENST00000550075 TBC1D17Q9HA65 648 aa27.37■■□□□ 1.97
CPSF6-205ENST00000550075 CCL26Q9Y258 94 aa27.37■■□□□ 1.97
CPSF6-205ENST00000550075 TICRRQ7Z2Z1 1910 aa27.37■■□□□ 1.97
CPSF6-205ENST00000550075 XPO1O14980 1071 aaKnown RBP27.36■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms