RNA–Protein interactions for RNA: ENST00000548938.5

HDAC7-228, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 2,719 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-228ENST00000548938 SLC25A41Q8N5S1 370 aa14.33□□□□□ -0.12
HDAC7-228ENST00000548938 FAM71DQ8N9W8 422 aa14.33□□□□□ -0.12
HDAC7-228ENST00000548938 OR5B17Q8NGF7 314 aa14.33□□□□□ -0.12
HDAC7-228ENST00000548938 SRPK1Q96SB4 655 aaKnown RBP14.33□□□□□ -0.12
HDAC7-228ENST00000548938 ECSITQ9BQ95 431 aa14.33□□□□□ -0.12
HDAC7-228ENST00000548938 THTPAQ9BU02 230 aa14.33□□□□□ -0.12
HDAC7-228ENST00000548938 FAM192AQ9GZU8 254 aa14.33□□□□□ -0.12
HDAC7-228ENST00000548938 MARCOQ9UEW3 520 aaPredicted RBP14.33□□□□□ -0.12
HDAC7-228ENST00000548938 PPM1HQ9ULR3 514 aa14.33□□□□□ -0.12
HDAC7-228ENST00000548938 POLIQ9UNA4 740 aa14.33□□□□□ -0.12
HDAC7-228ENST00000548938 TESPA1A2RU30 521 aaPredicted RBP14.33□□□□□ -0.12
HDAC7-228ENST00000548938 TBC1D12O60347 775 aa14.33□□□□□ -0.12
HDAC7-228ENST00000548938 PLA2G6O60733 806 aa14.33□□□□□ -0.12
HDAC7-228ENST00000548938 BAG2O95816 211 aa14.33□□□□□ -0.12
HDAC7-228ENST00000548938 IL1BP01584 269 aa14.33□□□□□ -0.12
HDAC7-228ENST00000548938 CALB1P05937 261 aa14.33□□□□□ -0.12
HDAC7-228ENST00000548938 CD48P09326 243 aa14.33□□□□□ -0.12
HDAC7-228ENST00000548938 GSTT1P30711 240 aa14.33□□□□□ -0.12
HDAC7-228ENST00000548938 CAP2P40123 477 aa14.33□□□□□ -0.12
HDAC7-228ENST00000548938 ZNF200P98182 395 aaPredicted RBP14.33□□□□□ -0.12
HDAC7-228ENST00000548938 CUL3Q13618 768 aa14.33□□□□□ -0.12
HDAC7-228ENST00000548938 SLC5A9Q2M3M2 681 aa14.33□□□□□ -0.12
HDAC7-228ENST00000548938 NET1Q7Z628 596 aaPredicted RBP14.33□□□□□ -0.12
HDAC7-228ENST00000548938 ARID3BQ8IVW6 561 aaPredicted RBP14.33□□□□□ -0.12
HDAC7-228ENST00000548938 SHKBP1Q8TBC3 707 aa14.33□□□□□ -0.12
HDAC7-228ENST00000548938 AZIN2Q96A70 460 aa14.33□□□□□ -0.12
HDAC7-228ENST00000548938 ZBTB45Q96K62 511 aaPredicted RBP14.33□□□□□ -0.12
HDAC7-228ENST00000548938 NDE1Q9NXR1 346 aa14.33□□□□□ -0.12
HDAC7-228ENST00000548938 RBAKQ9NYW8 714 aaPredicted RBP14.33□□□□□ -0.12
HDAC7-228ENST00000548938 ARHGAP28Q9P2N2 729 aa14.33□□□□□ -0.12
HDAC7-228ENST00000548938 GABBR1Q9UBS5 961 aa14.33□□□□□ -0.12
HDAC7-228ENST00000548938 SLC7A8Q9UHI5 535 aa14.33□□□□□ -0.12
HDAC7-228ENST00000548938 AGO2Q9UKV8 859 aaKnown RBP14.33□□□□□ -0.12
HDAC7-228ENST00000548938 TELO2Q9Y4R8 837 aa14.33□□□□□ -0.12
HDAC7-228ENST00000548938 LGR5O75473 907 aa14.32□□□□□ -0.12
HDAC7-228ENST00000548938 CIB2O75838 187 aa14.32□□□□□ -0.12
HDAC7-228ENST00000548938 TM7SF2O76062 418 aa14.32□□□□□ -0.12
HDAC7-228ENST00000548938 IL1R2P27930 398 aa14.32□□□□□ -0.12
HDAC7-228ENST00000548938 SFNP31947 248 aa14.32□□□□□ -0.12
HDAC7-228ENST00000548938 ZNF280AP59817 542 aaPredicted RBP14.32□□□□□ -0.12
HDAC7-228ENST00000548938 YWHAGP61981 247 aaKnown RBP eCLIP14.32□□□□□ -0.12
HDAC7-228ENST00000548938 KRT76Q01546 638 aa14.32□□□□□ -0.12
HDAC7-228ENST00000548938 BST1Q10588 318 aa14.32□□□□□ -0.12
HDAC7-228ENST00000548938 CDC16Q13042 620 aa14.32□□□□□ -0.12
HDAC7-228ENST00000548938 LAMB3Q13751 1172 aa14.32□□□□□ -0.12
HDAC7-228ENST00000548938 PIGHQ14442 188 aaPredicted RBP14.32□□□□□ -0.12
HDAC7-228ENST00000548938 PGM5Q15124 567 aa14.32□□□□□ -0.12
HDAC7-228ENST00000548938 ZNF394Q53GI3 561 aa14.32□□□□□ -0.12
HDAC7-228ENST00000548938 MYLK4Q86YV6 388 aaPredicted RBP14.32□□□□□ -0.12
HDAC7-228ENST00000548938 SMC1BQ8NDV3 1235 aa14.32□□□□□ -0.12
HDAC7-228ENST00000548938 IQCGQ9H095 443 aaKnown RBP14.32□□□□□ -0.12
HDAC7-228ENST00000548938 C17orf75Q9HAS0 396 aa14.32□□□□□ -0.12
HDAC7-228ENST00000548938 KCNK4Q9NYG8 393 aa14.32□□□□□ -0.12
HDAC7-228ENST00000548938 DCAF8L1A6NGE4 600 aa14.32□□□□□ -0.12
HDAC7-228ENST00000548938 COPEO14579 308 aa14.32□□□□□ -0.12
HDAC7-228ENST00000548938 KITP10721 976 aa14.32□□□□□ -0.12
HDAC7-228ENST00000548938 ZNF132P52740 706 aa14.32□□□□□ -0.12
HDAC7-228ENST00000548938 RTP1P59025 263 aa14.32□□□□□ -0.12
HDAC7-228ENST00000548938 ACTR3P61158 418 aa14.32□□□□□ -0.12
HDAC7-228ENST00000548938 SLC25A11Q02978 314 aaKnown RBP14.32□□□□□ -0.12
HDAC7-228ENST00000548938 TRMT5Q32P41 509 aaKnown RBP14.32□□□□□ -0.12
HDAC7-228ENST00000548938 PPP1R2P3Q6NXS1 205 aa14.32□□□□□ -0.12
HDAC7-228ENST00000548938 PRPF39Q86UA1 669 aaKnown RBP14.32□□□□□ -0.12
HDAC7-228ENST00000548938 ACAP3Q96P50 834 aa14.32□□□□□ -0.12
HDAC7-228ENST00000548938 POLR3FQ9H1D9 316 aaPredicted RBP14.32□□□□□ -0.12
HDAC7-228ENST00000548938 TRIM49D1C9J1S8 452 aa14.31□□□□□ -0.12
HDAC7-228ENST00000548938 IRF6O14896 467 aa14.31□□□□□ -0.12
HDAC7-228ENST00000548938 KLF11O14901 512 aa14.31□□□□□ -0.12
HDAC7-228ENST00000548938 TBXAS1P24557 533 aaPredicted RBP14.31□□□□□ -0.12
HDAC7-228ENST00000548938 RPS6P62753 249 aaKnown RBP14.31□□□□□ -0.12
HDAC7-228ENST00000548938 CNPY1Q3B7I2 92 aa14.31□□□□□ -0.12
HDAC7-228ENST00000548938 C1orf146Q5VVC0 180 aa14.31□□□□□ -0.12
HDAC7-228ENST00000548938 BBS12Q6ZW61 710 aa14.31□□□□□ -0.12
HDAC7-228ENST00000548938 ARFGAP1Q8N6T3 406 aa14.31□□□□□ -0.12
HDAC7-228ENST00000548938 NLGN2Q8NFZ4 835 aa14.31□□□□□ -0.12
HDAC7-228ENST00000548938 EPAS1Q99814 870 aa14.31□□□□□ -0.12
HDAC7-228ENST00000548938 MEI4A8MW99 385 aa14.31□□□□□ -0.12
HDAC7-228ENST00000548938 I3L4J1 428 aa14.31□□□□□ -0.12
HDAC7-228ENST00000548938 RNASEH1O60930 286 aaKnown RBP14.31□□□□□ -0.12
HDAC7-228ENST00000548938 AVILO75366 819 aa14.31□□□□□ -0.12
HDAC7-228ENST00000548938 AP2B1P63010 937 aa14.31□□□□□ -0.12
HDAC7-228ENST00000548938 TMPRSS15P98073 1019 aa14.31□□□□□ -0.12
HDAC7-228ENST00000548938 NCOA4Q13772 614 aa14.31□□□□□ -0.12
HDAC7-228ENST00000548938 PDCD2Q16342 344 aaPredicted RBP14.31□□□□□ -0.12
HDAC7-228ENST00000548938 SEZ6Q53EL9 994 aa14.31□□□□□ -0.12
HDAC7-228ENST00000548938 RASIP1Q5U651 963 aa14.31□□□□□ -0.12
HDAC7-228ENST00000548938 GPAT2Q6NUI2 795 aa14.31□□□□□ -0.12
HDAC7-228ENST00000548938 RAPH1Q70E73 1250 aa14.31□□□□□ -0.12
HDAC7-228ENST00000548938 RAVER2Q9HCJ3 691 aaKnown RBP14.31□□□□□ -0.12
HDAC7-228ENST00000548938 SEPT9Q9UHD8 586 aaPredicted RBP14.31□□□□□ -0.12
HDAC7-228ENST00000548938 TAGLN3Q9UI15 199 aa14.31□□□□□ -0.12
HDAC7-228ENST00000548938 LTBP3Q9NS15 1303 aa14.3□□□□□ -0.12
HDAC7-228ENST00000548938 SPECC1L-ADORA2AF8WAN1 911 aa14.3□□□□□ -0.12
HDAC7-228ENST00000548938 CYB561D2O14569 222 aa14.3□□□□□ -0.12
HDAC7-228ENST00000548938 LRCH4O75427 683 aa14.3□□□□□ -0.12
HDAC7-228ENST00000548938 STBD1O95210 358 aa14.3□□□□□ -0.12
HDAC7-228ENST00000548938 PSMA2P25787 234 aa14.3□□□□□ -0.12
HDAC7-228ENST00000548938 RFC1P35251 1148 aaPredicted RBP14.3□□□□□ -0.12
HDAC7-228ENST00000548938 GMPSP49915 693 aaPredicted RBP14.3□□□□□ -0.12
HDAC7-228ENST00000548938 ALDH18A1P54886 795 aaKnown RBP14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms