RNA–Protein interactions for RNA: ENST00000548570.1

APP-217, Transcript of amyloid beta precursor protein, humanhuman

TSL 2

Gene APP, Length 361 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-217ENST00000548570 C2CD6Q53TS8 623 aa5.3□□□□□ -1.56
APP-217ENST00000548570 TAF3Q5VWG9 929 aa5.3□□□□□ -1.56
APP-217ENST00000548570 TPGS2Q68CL5 300 aa5.3□□□□□ -1.56
APP-217ENST00000548570 KIAA1841Q6NSI8 718 aa5.3□□□□□ -1.56
APP-217ENST00000548570 LLGL2Q6P1M3 1020 aa5.3□□□□□ -1.56
APP-217ENST00000548570 SYCE2Q6PIF2 218 aa5.3□□□□□ -1.56
APP-217ENST00000548570 RAD9BQ6WBX8 426 aa5.3□□□□□ -1.56
APP-217ENST00000548570 TMEM184AQ6ZMB5 413 aa5.3□□□□□ -1.56
APP-217ENST00000548570 CCDC186Q7Z3E2 898 aa5.3□□□□□ -1.56
APP-217ENST00000548570 ARHGAP30Q7Z6I6 1101 aaPredicted RBP5.3□□□□□ -1.56
APP-217ENST00000548570 TMEM150AQ86TG1 271 aa5.3□□□□□ -1.56
APP-217ENST00000548570 PIGZQ86VD9 579 aa5.3□□□□□ -1.56
APP-217ENST00000548570 METTL23Q86XA0 190 aa5.3□□□□□ -1.56
APP-217ENST00000548570 PASD1Q8IV76 773 aa5.3□□□□□ -1.56
APP-217ENST00000548570 TCEAL8Q8IYN2 117 aa5.3□□□□□ -1.56
APP-217ENST00000548570 THEM5Q8N1Q8 247 aa5.3□□□□□ -1.56
APP-217ENST00000548570 C12orf76Q8N812 135 aaPredicted RBP5.3□□□□□ -1.56
APP-217ENST00000548570 ANKRD52Q8NB46 1076 aa5.3□□□□□ -1.56
APP-217ENST00000548570 KREMEN2Q8NCW0 462 aa5.3□□□□□ -1.56
APP-217ENST00000548570 OR8K1Q8NGG5 319 aa5.3□□□□□ -1.56
APP-217ENST00000548570 UBA3Q8TBC4 463 aa5.3□□□□□ -1.56
APP-217ENST00000548570 GPR152Q8TDT2 470 aa5.3□□□□□ -1.56
APP-217ENST00000548570 MICAL1Q8TDZ2 1067 aa5.3□□□□□ -1.56
APP-217ENST00000548570 CLEC4CQ8WTT0 213 aa5.3□□□□□ -1.56
APP-217ENST00000548570 ATRIPQ8WXE1 791 aa5.3□□□□□ -1.56
APP-217ENST00000548570 NDRG1Q92597 394 aaKnown RBP5.3□□□□□ -1.56
APP-217ENST00000548570 SECISBP2LQ93073 1101 aaKnown RBP5.3□□□□□ -1.56
APP-217ENST00000548570 PIWIL1Q96J94 861 aaKnown RBP5.3□□□□□ -1.56
APP-217ENST00000548570 MSLNLQ96KJ4 702 aa5.3□□□□□ -1.56
APP-217ENST00000548570 HEXIM2Q96MH2 286 aaKnown RBP5.3□□□□□ -1.56
APP-217ENST00000548570 SPAG5Q96R06 1193 aa5.3□□□□□ -1.56
APP-217ENST00000548570 PPP1R9BQ96SB3 815 aa5.3□□□□□ -1.56
APP-217ENST00000548570 AGPAT1Q99943 283 aa5.3□□□□□ -1.56
APP-217ENST00000548570 DUSP16Q9BY84 665 aa5.3□□□□□ -1.56
APP-217ENST00000548570 S1PR5Q9H228 398 aa5.3□□□□□ -1.56
APP-217ENST00000548570 TLE6Q9H808 572 aa5.3□□□□□ -1.56
APP-217ENST00000548570 ABCB6Q9NP58 842 aa5.3□□□□□ -1.56
APP-217ENST00000548570 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP5.3□□□□□ -1.56
APP-217ENST00000548570 KRT82Q9NSB4 513 aa5.3□□□□□ -1.56
APP-217ENST00000548570 ABI2Q9NYB9 513 aaPredicted RBP5.3□□□□□ -1.56
APP-217ENST00000548570 IL37Q9NZH6 218 aa5.3□□□□□ -1.56
APP-217ENST00000548570 STK39Q9UEW8 545 aa5.3□□□□□ -1.56
APP-217ENST00000548570 AFF4Q9UHB7 1163 aaKnown RBP5.3□□□□□ -1.56
APP-217ENST00000548570 PUF60Q9UHX1 559 aaKnown RBP5.3□□□□□ -1.56
APP-217ENST00000548570 LUC7L2Q9Y383 392 aaKnown RBP5.3□□□□□ -1.56
APP-217ENST00000548570 R3HCC1Q9Y3T6 440 aaKnown RBP5.3□□□□□ -1.56
APP-217ENST00000548570 DAAM1Q9Y4D1 1078 aa5.3□□□□□ -1.56
APP-217ENST00000548570 YIPF1Q9Y548 306 aa5.3□□□□□ -1.56
APP-217ENST00000548570 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP5.3□□□□□ -1.56
APP-217ENST00000548570 ANK1P16157 1881 aa5.3□□□□□ -1.56
APP-217ENST00000548570 ARHGEF37A1IGU5 675 aa5.29□□□□□ -1.56
APP-217ENST00000548570 FAM92AA1XBS5 289 aa5.29□□□□□ -1.56
APP-217ENST00000548570 SOWAHDA6NJG2 315 aa5.29□□□□□ -1.56
APP-217ENST00000548570 PAPSS1O43252 624 aaPredicted RBP5.29□□□□□ -1.56
APP-217ENST00000548570 SIAH2O43255 324 aa5.29□□□□□ -1.56
APP-217ENST00000548570 THAP12O43422 761 aa5.29□□□□□ -1.56
APP-217ENST00000548570 TBX10O75333 385 aa5.29□□□□□ -1.56
APP-217ENST00000548570 TADA3O75528 432 aa5.29□□□□□ -1.56
APP-217ENST00000548570 ABL1P00519 1130 aa5.29□□□□□ -1.56
APP-217ENST00000548570 C1RP00736 705 aa5.29□□□□□ -1.56
APP-217ENST00000548570 ERBB2P04626 1255 aa5.29□□□□□ -1.56
APP-217ENST00000548570 SERPING1P05155 500 aa5.29□□□□□ -1.56
APP-217ENST00000548570 FYNP06241 537 aa5.29□□□□□ -1.56
APP-217ENST00000548570 TPM3P06753 285 aa5.29□□□□□ -1.56
APP-217ENST00000548570 CPB1P15086 417 aa5.29□□□□□ -1.56
APP-217ENST00000548570 FERP16591 822 aa5.29□□□□□ -1.56
APP-217ENST00000548570 LORP23490 312 aaPredicted RBP5.29□□□□□ -1.56
APP-217ENST00000548570 KLRC2P26717 231 aa5.29□□□□□ -1.56
APP-217ENST00000548570 EIF4A3P38919 411 aaKnown RBP5.29□□□□□ -1.56
APP-217ENST00000548570 CCR2P41597 374 aa5.29□□□□□ -1.56
APP-217ENST00000548570 PLA2G4AP47712 749 aa5.29□□□□□ -1.56
APP-217ENST00000548570 MAP3K7CLP57077 242 aa5.29□□□□□ -1.56
APP-217ENST00000548570 YWHAEP62258 255 aaKnown RBP5.29□□□□□ -1.56
APP-217ENST00000548570 NOMO3P69849 1222 aa5.29□□□□□ -1.56
APP-217ENST00000548570 NTHL1P78549 312 aa5.29□□□□□ -1.56
APP-217ENST00000548570 CCZ1BP86790 482 aa5.29□□□□□ -1.56
APP-217ENST00000548570 CCZ1P86791 482 aaPredicted RBP5.29□□□□□ -1.56
APP-217ENST00000548570 CDK17Q00537 523 aa5.29□□□□□ -1.56
APP-217ENST00000548570 TSPY1Q01534 308 aa5.29□□□□□ -1.56
APP-217ENST00000548570 CYP27A1Q02318 531 aa5.29□□□□□ -1.56
APP-217ENST00000548570 GFPT1Q06210 699 aaPredicted RBP5.29□□□□□ -1.56
APP-217ENST00000548570 PDCLQ13371 301 aa5.29□□□□□ -1.56
APP-217ENST00000548570 TRIM14Q14142 442 aa5.29□□□□□ -1.56
APP-217ENST00000548570 TAF5Q15542 800 aa5.29□□□□□ -1.56
APP-217ENST00000548570 ASIC2Q16515 512 aa5.29□□□□□ -1.56
APP-217ENST00000548570 NFE2Q16621 373 aaPredicted RBP5.29□□□□□ -1.56
APP-217ENST00000548570 CLEC16AQ2KHT3 1053 aa5.29□□□□□ -1.56
APP-217ENST00000548570 PTPN20Q4JDL3 420 aa5.29□□□□□ -1.56
APP-217ENST00000548570 SGO2Q562F6 1265 aa5.29□□□□□ -1.56
APP-217ENST00000548570 RAB41Q5JT25 222 aa5.29□□□□□ -1.56
APP-217ENST00000548570 SFMBT2Q5VUG0 894 aa5.29□□□□□ -1.56
APP-217ENST00000548570 PDE12Q6L8Q7 609 aaKnown RBP5.29□□□□□ -1.56
APP-217ENST00000548570 TRNP1Q6NT89 227 aa5.29□□□□□ -1.56
APP-217ENST00000548570 CACNA2D4Q7Z3S7 1137 aa5.29□□□□□ -1.56
APP-217ENST00000548570 SCD5Q86SK9 330 aa5.29□□□□□ -1.56
APP-217ENST00000548570 RETREG3Q86VR2 466 aa5.29□□□□□ -1.56
APP-217ENST00000548570 PPFIBP1Q86W92 1011 aa5.29□□□□□ -1.56
APP-217ENST00000548570 TMC8Q8IU68 726 aa5.29□□□□□ -1.56
APP-217ENST00000548570 SPATA2LQ8IUW3 424 aaPredicted RBP5.29□□□□□ -1.56
APP-217ENST00000548570 DCP1BQ8IZD4 617 aaKnown RBP5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms