RNA–Protein interactions for RNA: ENST00000545920.1

SNHG1-225, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 625 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-225ENST00000545920 KAT5Q92993 513 aa6.78□□□□□ -1.32
SNHG1-225ENST00000545920 LRRC39Q96DD0 335 aa6.78□□□□□ -1.32
SNHG1-225ENST00000545920 ERP27Q96DN0 273 aa6.78□□□□□ -1.32
SNHG1-225ENST00000545920 RMDN2Q96LZ7 410 aa6.78□□□□□ -1.32
SNHG1-225ENST00000545920 ZNF570Q96NI8 536 aa6.78□□□□□ -1.32
SNHG1-225ENST00000545920 SLITRK1Q96PX8 696 aa6.78□□□□□ -1.32
SNHG1-225ENST00000545920 CYTH2Q99418 400 aa6.78□□□□□ -1.32
SNHG1-225ENST00000545920 CGRRF1Q99675 332 aa6.78□□□□□ -1.32
SNHG1-225ENST00000545920 TINF2Q9BSI4 451 aa6.78□□□□□ -1.32
SNHG1-225ENST00000545920 FAM192AQ9GZU8 254 aa6.78□□□□□ -1.32
SNHG1-225ENST00000545920 MTFR1LQ9H019 292 aa6.78□□□□□ -1.32
SNHG1-225ENST00000545920 KIAA1683Q9H0B3 1180 aa6.78□□□□□ -1.32
SNHG1-225ENST00000545920 MYLK2Q9H1R3 596 aa6.78□□□□□ -1.32
SNHG1-225ENST00000545920 STN1Q9H668 368 aaKnown RBP6.78□□□□□ -1.32
SNHG1-225ENST00000545920 ACSS3Q9H6R3 686 aa6.78□□□□□ -1.32
SNHG1-225ENST00000545920 PNPLA8Q9NP80 782 aa6.78□□□□□ -1.32
SNHG1-225ENST00000545920 SAYSD1Q9NPB0 183 aa6.78□□□□□ -1.32
SNHG1-225ENST00000545920 ZFATQ9P243 1243 aa6.78□□□□□ -1.32
SNHG1-225ENST00000545920 ZNF212Q9UDV6 495 aa6.78□□□□□ -1.32
SNHG1-225ENST00000545920 ZFP69BQ9UJL9 534 aa6.78□□□□□ -1.32
SNHG1-225ENST00000545920 ZMYND8Q9ULU4 1186 aaPredicted RBP6.78□□□□□ -1.32
SNHG1-225ENST00000545920 ZNF148Q9UQR1 794 aa6.78□□□□□ -1.32
SNHG1-225ENST00000545920 CHKBQ9Y259 395 aa6.78□□□□□ -1.32
SNHG1-225ENST00000545920 SSX2IPQ9Y2D8 614 aa6.78□□□□□ -1.32
SNHG1-225ENST00000545920 LRCH1Q9Y2L9 728 aa6.78□□□□□ -1.32
SNHG1-225ENST00000545920 SNCAIPQ9Y6H5 919 aa6.78□□□□□ -1.32
SNHG1-225ENST00000545920 RGPD3A6NKT7 1758 aaPredicted RBP6.77□□□□□ -1.33
SNHG1-225ENST00000545920 RGPD4Q7Z3J3 1758 aa6.77□□□□□ -1.33
SNHG1-225ENST00000545920 hCG_1818297A0A087WSY0 165 aa6.77□□□□□ -1.33
SNHG1-225ENST00000545920 CFAP69A5D8W1 941 aa6.77□□□□□ -1.33
SNHG1-225ENST00000545920 ZNF487B1APH4 448 aa6.77□□□□□ -1.33
SNHG1-225ENST00000545920 TGFBR3LH3BV60 316 aa6.77□□□□□ -1.33
SNHG1-225ENST00000545920 TRDMT1O14717 391 aaKnown RBP6.77□□□□□ -1.33
SNHG1-225ENST00000545920 TLR3O15455 904 aaKnown RBP6.77□□□□□ -1.33
SNHG1-225ENST00000545920 MED7O43513 233 aa6.77□□□□□ -1.33
SNHG1-225ENST00000545920 GAS2O43903 313 aaKnown RBP6.77□□□□□ -1.33
SNHG1-225ENST00000545920 MAGEC1O60732 1142 aa6.77□□□□□ -1.33
SNHG1-225ENST00000545920 PEX11AO75192 247 aa6.77□□□□□ -1.33
SNHG1-225ENST00000545920 MICAL2O94851 1124 aa6.77□□□□□ -1.33
SNHG1-225ENST00000545920 KRT1P04264 644 aa6.77□□□□□ -1.33
SNHG1-225ENST00000545920 CTSHP09668 335 aa6.77□□□□□ -1.33
SNHG1-225ENST00000545920 DHRS4L1P0CG22 281 aa6.77□□□□□ -1.33
SNHG1-225ENST00000545920 ACO1P21399 889 aaKnown RBP6.77□□□□□ -1.33
SNHG1-225ENST00000545920 PIK3CAP42336 1068 aa6.77□□□□□ -1.33
SNHG1-225ENST00000545920 NAMPTP43490 491 aa6.77□□□□□ -1.33
SNHG1-225ENST00000545920 LIG4P49917 911 aa6.77□□□□□ -1.33
SNHG1-225ENST00000545920 RNF144AP50876 292 aaPredicted RBP6.77□□□□□ -1.33
SNHG1-225ENST00000545920 ARSEP51690 589 aa6.77□□□□□ -1.33
SNHG1-225ENST00000545920 SNAP25P60880 206 aa6.77□□□□□ -1.33
SNHG1-225ENST00000545920 KLC1Q07866 573 aa6.77□□□□□ -1.33
SNHG1-225ENST00000545920 MGAT5Q09328 741 aa6.77□□□□□ -1.33
SNHG1-225ENST00000545920 SNX1Q13596 522 aa6.77□□□□□ -1.33
SNHG1-225ENST00000545920 KPNB1Q14974 876 aaKnown RBP6.77□□□□□ -1.33
SNHG1-225ENST00000545920 PGM5Q15124 567 aa6.77□□□□□ -1.33
SNHG1-225ENST00000545920 STXBP5Q5T5C0 1151 aa6.77□□□□□ -1.33
SNHG1-225ENST00000545920 C6orf163Q5TEZ5 329 aa6.77□□□□□ -1.33
SNHG1-225ENST00000545920 DAB2IPQ5VWQ8 1189 aa6.77□□□□□ -1.33
SNHG1-225ENST00000545920 DNAJC24Q6P3W2 148 aa6.77□□□□□ -1.33
SNHG1-225ENST00000545920 CCDC62Q6P9F0 684 aa6.77□□□□□ -1.33
SNHG1-225ENST00000545920 XKR5Q6UX68 686 aa6.77□□□□□ -1.33
SNHG1-225ENST00000545920 NSMFQ6X4W1 530 aa6.77□□□□□ -1.33
SNHG1-225ENST00000545920 ZPBP2Q6X784 338 aa6.77□□□□□ -1.33
SNHG1-225ENST00000545920 SPOCD1Q6ZMY3 1216 aa6.77□□□□□ -1.33
SNHG1-225ENST00000545920 SMIM5Q71RC9 77 aa6.77□□□□□ -1.33
SNHG1-225ENST00000545920 NLRP9Q7RTR0 991 aa6.77□□□□□ -1.33
SNHG1-225ENST00000545920 PTF1AQ7RTS3 328 aa6.77□□□□□ -1.33
SNHG1-225ENST00000545920 CLNKQ7Z7G1 428 aa6.77□□□□□ -1.33
SNHG1-225ENST00000545920 ERICH1Q86X53 443 aa6.77□□□□□ -1.33
SNHG1-225ENST00000545920 PDIK1LQ8N165 341 aa6.77□□□□□ -1.33
SNHG1-225ENST00000545920 TMEM151AQ8N4L1 468 aa6.77□□□□□ -1.33
SNHG1-225ENST00000545920 TTC39CQ8N584 583 aa6.77□□□□□ -1.33
SNHG1-225ENST00000545920 UBR7Q8N806 425 aa6.77□□□□□ -1.33
SNHG1-225ENST00000545920 DDX51Q8N8A6 666 aaKnown RBP eCLIP6.77□□□□□ -1.33
SNHG1-225ENST00000545920 FAM13CQ8NE31 585 aa6.77□□□□□ -1.33
SNHG1-225ENST00000545920 UHMK1Q8TAS1 419 aaKnown RBP6.77□□□□□ -1.33
SNHG1-225ENST00000545920 GPR152Q8TDT2 470 aa6.77□□□□□ -1.33
SNHG1-225ENST00000545920 PYROXD1Q8WU10 500 aa6.77□□□□□ -1.33
SNHG1-225ENST00000545920 CCDC127Q96BQ5 260 aa6.77□□□□□ -1.33
SNHG1-225ENST00000545920 SLC7A6OSQ96CW6 309 aaPredicted RBP6.77□□□□□ -1.33
SNHG1-225ENST00000545920 MTBPQ96DY7 904 aa6.77□□□□□ -1.33
SNHG1-225ENST00000545920 THOC1Q96FV9 657 aaKnown RBP6.77□□□□□ -1.33
SNHG1-225ENST00000545920 CRELD1Q96HD1 420 aa6.77□□□□□ -1.33
SNHG1-225ENST00000545920 BTBD6Q96KE9 485 aa6.77□□□□□ -1.33
SNHG1-225ENST00000545920 TRAPPC9Q96Q05 1148 aa6.77□□□□□ -1.33
SNHG1-225ENST00000545920 NR1H4Q96RI1 486 aaPredicted RBP6.77□□□□□ -1.33
SNHG1-225ENST00000545920 NUDCD1Q96RS6 583 aa6.77□□□□□ -1.33
SNHG1-225ENST00000545920 SH3GL3Q99963 347 aa6.77□□□□□ -1.33
SNHG1-225ENST00000545920 BTBD10Q9BSF8 475 aa6.77□□□□□ -1.33
SNHG1-225ENST00000545920 TBC1D10AQ9BXI6 508 aa6.77□□□□□ -1.33
SNHG1-225ENST00000545920 LHX5Q9H2C1 402 aa6.77□□□□□ -1.33
SNHG1-225ENST00000545920 SYNCQ9H7C4 482 aa6.77□□□□□ -1.33
SNHG1-225ENST00000545920 ZNF395Q9H8N7 513 aaPredicted RBP6.77□□□□□ -1.33
SNHG1-225ENST00000545920 VPS37BQ9H9H4 285 aa6.77□□□□□ -1.33
SNHG1-225ENST00000545920 PRDM16Q9HAZ2 1276 aa6.77□□□□□ -1.33
SNHG1-225ENST00000545920 SLC38A10Q9HBR0 1119 aa6.77□□□□□ -1.33
SNHG1-225ENST00000545920 ZDHHC3Q9NYG2 299 aa6.77□□□□□ -1.33
SNHG1-225ENST00000545920 PPP1R1BQ9UD71 204 aaPredicted RBP6.77□□□□□ -1.33
SNHG1-225ENST00000545920 ZNF180Q9UJW8 692 aa6.77□□□□□ -1.33
SNHG1-225ENST00000545920 ANGPTL2Q9UKU9 493 aa6.77□□□□□ -1.33
SNHG1-225ENST00000545920 STK38LQ9Y2H1 464 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms