RNA–Protein interactions for RNA: ENST00000545688.5

SNHG1-224, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3

Gene SNHG1, Length 610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-224ENST00000545688 GALNT4Q8N4A0 578 aa5.82□□□□□ -1.48
SNHG1-224ENST00000545688 OR56A3Q8NH54 315 aa5.82□□□□□ -1.48
SNHG1-224ENST00000545688 DNAJB14Q8TBM8 379 aa5.82□□□□□ -1.48
SNHG1-224ENST00000545688 ZNF518BQ9C0D4 1074 aa5.82□□□□□ -1.48
SNHG1-224ENST00000545688 TMEM60Q9H2L4 133 aa5.82□□□□□ -1.48
SNHG1-224ENST00000545688 CAPN8A6NHC0 703 aa5.81□□□□□ -1.48
SNHG1-224ENST00000545688 KCNU1A8MYU2 1149 aa5.81□□□□□ -1.48
SNHG1-224ENST00000545688 LRRC41Q15345 812 aa5.81□□□□□ -1.48
SNHG1-224ENST00000545688 CERKLQ49MI3 558 aaPredicted RBP5.81□□□□□ -1.48
SNHG1-224ENST00000545688 SERPINA13PQ6UXR4 307 aa5.81□□□□□ -1.48
SNHG1-224ENST00000545688 MICU3Q86XE3 530 aa5.81□□□□□ -1.48
SNHG1-224ENST00000545688 CNGA4Q8IV77 575 aa5.81□□□□□ -1.48
SNHG1-224ENST00000545688 KIAA0319LQ8IZA0 1049 aa5.81□□□□□ -1.48
SNHG1-224ENST00000545688 SPARTQ8N0X7 666 aa5.81□□□□□ -1.48
SNHG1-224ENST00000545688 Q8N9P0 234 aaPredicted RBP5.81□□□□□ -1.48
SNHG1-224ENST00000545688 DENND1AQ8TEH3 1009 aa5.81□□□□□ -1.48
SNHG1-224ENST00000545688 RSPRY1Q96DX4 576 aa5.81□□□□□ -1.48
SNHG1-224ENST00000545688 MMS19Q96T76 1030 aa5.81□□□□□ -1.48
SNHG1-224ENST00000545688 PRSS22Q9GZN4 317 aa5.81□□□□□ -1.48
SNHG1-224ENST00000545688 A1CFQ9NQ94 594 aaKnown RBP5.81□□□□□ -1.48
SNHG1-224ENST00000545688 STK32BQ9NY57 414 aa5.81□□□□□ -1.48
SNHG1-224ENST00000545688 FAM227AF5H4B4 570 aa5.8□□□□□ -1.48
SNHG1-224ENST00000545688 SRGAP2O75044 1071 aa5.8□□□□□ -1.48
SNHG1-224ENST00000545688 CYP2A6P11509 494 aaPredicted RBP5.8□□□□□ -1.48
SNHG1-224ENST00000545688 MYCLP12524 364 aaPredicted RBP5.8□□□□□ -1.48
SNHG1-224ENST00000545688 GKP32189 559 aa5.8□□□□□ -1.48
SNHG1-224ENST00000545688 BCAT1P54687 386 aa5.8□□□□□ -1.48
SNHG1-224ENST00000545688 SUMO3P55854 103 aaPredicted RBP5.8□□□□□ -1.48
SNHG1-224ENST00000545688 CCNIQ14094 377 aa5.8□□□□□ -1.48
SNHG1-224ENST00000545688 CNN3Q15417 329 aaKnown RBP5.8□□□□□ -1.48
SNHG1-224ENST00000545688 MIS18BP1Q6P0N0 1132 aa5.8□□□□□ -1.48
SNHG1-224ENST00000545688 APOA5Q6Q788 366 aa5.8□□□□□ -1.48
SNHG1-224ENST00000545688 SIRT6Q8N6T7 355 aa5.8□□□□□ -1.48
SNHG1-224ENST00000545688 ZNF366Q8N895 744 aa5.8□□□□□ -1.48
SNHG1-224ENST00000545688 SPSB4Q96A44 273 aa5.8□□□□□ -1.48
SNHG1-224ENST00000545688 ZNF48Q96MX3 618 aaPredicted RBP5.8□□□□□ -1.48
SNHG1-224ENST00000545688 SACM1LQ9NTJ5 587 aa5.8□□□□□ -1.48
SNHG1-224ENST00000545688 ASIC5Q9NY37 505 aa5.8□□□□□ -1.48
SNHG1-224ENST00000545688 CPNE7Q9UBL6 633 aa5.8□□□□□ -1.48
SNHG1-224ENST00000545688 AMFRQ9UKV5 643 aa5.8□□□□□ -1.48
SNHG1-224ENST00000545688 DRG1Q9Y295 367 aaKnown RBP5.8□□□□□ -1.48
SNHG1-224ENST00000545688 CDY1Q9Y6F8 540 aa5.8□□□□□ -1.48
SNHG1-224ENST00000545688 WDR17Q8IZU2 1322 aa5.79□□□□□ -1.48
SNHG1-224ENST00000545688 TCRBV5S1A1TA0A578 114 aa5.79□□□□□ -1.48
SNHG1-224ENST00000545688 CFAP69A5D8W1 941 aa5.79□□□□□ -1.48
SNHG1-224ENST00000545688 UBE2Q2LH0YL09 131 aa5.79□□□□□ -1.48
SNHG1-224ENST00000545688 PSMD9O00233 223 aa5.79□□□□□ -1.48
SNHG1-224ENST00000545688 CES2O00748 559 aa5.79□□□□□ -1.48
SNHG1-224ENST00000545688 MARCH6O60337 910 aa5.79□□□□□ -1.48
SNHG1-224ENST00000545688 MOSPD3O75425 235 aa5.79□□□□□ -1.48
SNHG1-224ENST00000545688 USP1O94782 785 aa5.79□□□□□ -1.48
SNHG1-224ENST00000545688 SCGB1D2O95969 90 aa5.79□□□□□ -1.48
SNHG1-224ENST00000545688 TOP3BO95985 862 aaKnown RBP5.79□□□□□ -1.48
SNHG1-224ENST00000545688 FGAP02671 866 aa5.79□□□□□ -1.48
SNHG1-224ENST00000545688 CHRM5P08912 532 aaPredicted RBP5.79□□□□□ -1.48
SNHG1-224ENST00000545688 PTGER1P34995 402 aa5.79□□□□□ -1.48
SNHG1-224ENST00000545688 DAZAP2Q15038 168 aaPredicted RBP5.79□□□□□ -1.48
SNHG1-224ENST00000545688 PLEKHG6Q3KR16 790 aa5.79□□□□□ -1.48
SNHG1-224ENST00000545688 FAM102BQ5T8I3 360 aa5.79□□□□□ -1.48
SNHG1-224ENST00000545688 CACHD1Q5VU97 1274 aa5.79□□□□□ -1.48
SNHG1-224ENST00000545688 BCDIN3DQ7Z5W3 292 aaKnown RBP5.79□□□□□ -1.48
SNHG1-224ENST00000545688 KCTD20Q7Z5Y7 419 aa5.79□□□□□ -1.48
SNHG1-224ENST00000545688 SFTPA1Q8IWL2 248 aa5.79□□□□□ -1.48
SNHG1-224ENST00000545688 SUCLG2Q96I99 432 aa5.79□□□□□ -1.48
SNHG1-224ENST00000545688 PPP1R9BQ96SB3 815 aa5.79□□□□□ -1.48
SNHG1-224ENST00000545688 SPRTNQ9H040 489 aaPredicted RBP5.79□□□□□ -1.48
SNHG1-224ENST00000545688 XPNPEP3Q9NQH7 507 aa5.79□□□□□ -1.48
SNHG1-224ENST00000545688 KLHL13Q9P2N7 655 aa5.79□□□□□ -1.48
SNHG1-224ENST00000545688 DNMT3BQ9UBC3 853 aaKnown RBP5.79□□□□□ -1.48
SNHG1-224ENST00000545688 LPAR3Q9UBY5 353 aa5.79□□□□□ -1.48
SNHG1-224ENST00000545688 PAXBP1Q9Y5B6 917 aa5.79□□□□□ -1.48
SNHG1-224ENST00000545688 ZNF521Q96K83 1311 aa5.78□□□□□ -1.48
SNHG1-224ENST00000545688 CYP2D7A0A087X1C5 515 aa5.78□□□□□ -1.48
SNHG1-224ENST00000545688 TRIM43BA6NCK2 446 aa5.78□□□□□ -1.48
SNHG1-224ENST00000545688 MBD3L4A6NDZ8 208 aaPredicted RBP5.78□□□□□ -1.48
SNHG1-224ENST00000545688 MBD3L3A6NE82 208 aaPredicted RBP5.78□□□□□ -1.48
SNHG1-224ENST00000545688 A6NNZ2 444 aa5.78□□□□□ -1.48
SNHG1-224ENST00000545688 PMPCBO75439 489 aa5.78□□□□□ -1.48
SNHG1-224ENST00000545688 RASAL1O95294 804 aa5.78□□□□□ -1.48
SNHG1-224ENST00000545688 U2AF1L5P0DN76 240 aaPredicted RBP5.78□□□□□ -1.48
SNHG1-224ENST00000545688 BRAFP15056 766 aa5.78□□□□□ -1.48
SNHG1-224ENST00000545688 PRKAR1BP31321 381 aa5.78□□□□□ -1.48
SNHG1-224ENST00000545688 SUMO2P61956 95 aaKnown RBP5.78□□□□□ -1.48
SNHG1-224ENST00000545688 U2AF1Q01081 240 aaKnown RBP eCLIP5.78□□□□□ -1.487e-8■■■□□ 16.2
SNHG1-224ENST00000545688 FAM187BQ17R55 369 aa5.78□□□□□ -1.48
SNHG1-224ENST00000545688 CHPFQ8IZ52 775 aa5.78□□□□□ -1.48
SNHG1-224ENST00000545688 TRIM43Q96BQ3 446 aaPredicted RBP5.78□□□□□ -1.48
SNHG1-224ENST00000545688 FCRL4Q96PJ5 515 aa5.78□□□□□ -1.48
SNHG1-224ENST00000545688 TFCP2L1Q9NZI6 479 aa5.78□□□□□ -1.48
SNHG1-224ENST00000545688 L1RE1Q9UN81 338 aa5.78□□□□□ -1.48
SNHG1-224ENST00000545688 H7C4K7 107 aa5.77□□□□□ -1.49
SNHG1-224ENST00000545688 PYCARD-AS1I3L0S3 204 aa5.77□□□□□ -1.49
SNHG1-224ENST00000545688 CD3EAPO15446 510 aaKnown RBP5.77□□□□□ -1.49
SNHG1-224ENST00000545688 BCAR3O75815 825 aa5.77□□□□□ -1.49
SNHG1-224ENST00000545688 KLRC1P26715 233 aa5.77□□□□□ -1.49
SNHG1-224ENST00000545688 UQCRC1P31930 480 aa5.77□□□□□ -1.49
SNHG1-224ENST00000545688 MMP13P45452 471 aa5.77□□□□□ -1.49
SNHG1-224ENST00000545688 NFE2Q16621 373 aaPredicted RBP5.77□□□□□ -1.49
SNHG1-224ENST00000545688 INSCQ1MX18 579 aa5.77□□□□□ -1.49
SNHG1-224ENST00000545688 MINDY4Q4G0A6 757 aa5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms