RNA–Protein interactions for RNA: ENST00000545354.1

UBE4A-203, Transcript of ubiquitination factor E4A, humanhuman

TSL 2 BASIC

Gene UBE4A, Length 2,149 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4A-203ENST00000545354 PTCH2Q9Y6C5 1203 aa5.35□□□□□ -1.55
UBE4A-203ENST00000545354 CSNK1G3Q9Y6M4 447 aa5.35□□□□□ -1.55
UBE4A-203ENST00000545354 RICTORQ6R327 1708 aa5.35□□□□□ -1.55
UBE4A-203ENST00000545354 ARHGEF12Q9NZN5 1544 aa5.35□□□□□ -1.55
UBE4A-203ENST00000545354 MROH7-TTC4A0A0A0MT08 1334 aa5.35□□□□□ -1.55
UBE4A-203ENST00000545354 MROH7Q68CQ1 1323 aa5.35□□□□□ -1.55
UBE4A-203ENST00000545354 MAP3K15Q6ZN16 1313 aa5.35□□□□□ -1.55
UBE4A-203ENST00000545354 FUOMA2VDF0 154 aa5.35□□□□□ -1.55
UBE4A-203ENST00000545354 VPS37CA5D8V6 355 aaPredicted RBP5.35□□□□□ -1.55
UBE4A-203ENST00000545354 PRR5-ARHGAP8B1AHC4 643 aa5.35□□□□□ -1.55
UBE4A-203ENST00000545354 CHURC1-FNTBB4DL54 471 aa5.35□□□□□ -1.55
UBE4A-203ENST00000545354 DDX39AO00148 427 aaKnown RBP5.35□□□□□ -1.55
UBE4A-203ENST00000545354 PI15O43692 258 aa5.35□□□□□ -1.55
UBE4A-203ENST00000545354 KRT86O43790 486 aa5.35□□□□□ -1.55
UBE4A-203ENST00000545354 BRINP1O60477 761 aa5.35□□□□□ -1.55
UBE4A-203ENST00000545354 N4BP1O75113 896 aaKnown RBP5.35□□□□□ -1.55
UBE4A-203ENST00000545354 PHACTR2O75167 634 aa5.35□□□□□ -1.55
UBE4A-203ENST00000545354 TJP3O95049 919 aa5.35□□□□□ -1.55
UBE4A-203ENST00000545354 SLC3A2P08195 630 aaKnown RBP5.35□□□□□ -1.55
UBE4A-203ENST00000545354 QDPRP09417 244 aa5.35□□□□□ -1.55
UBE4A-203ENST00000545354 SLC2A3P11169 496 aa5.35□□□□□ -1.55
UBE4A-203ENST00000545354 NPR3P17342 541 aa5.35□□□□□ -1.55
UBE4A-203ENST00000545354 KCNA3P22001 575 aa5.35□□□□□ -1.55
UBE4A-203ENST00000545354 KELP23276 732 aa5.35□□□□□ -1.55
UBE4A-203ENST00000545354 HTR7P34969 479 aa5.35□□□□□ -1.55
UBE4A-203ENST00000545354 IGHMBP2P38935 993 aaKnown RBP5.35□□□□□ -1.55
UBE4A-203ENST00000545354 CDK7P50613 346 aa5.35□□□□□ -1.55
UBE4A-203ENST00000545354 POLGP54098 1239 aaPredicted RBP5.35□□□□□ -1.55
UBE4A-203ENST00000545354 CARD18P57730 90 aa5.35□□□□□ -1.55
UBE4A-203ENST00000545354 SLC26A5P58743 744 aa5.35□□□□□ -1.55
UBE4A-203ENST00000545354 RPS3AP61247 264 aaKnown RBP5.35□□□□□ -1.55
UBE4A-203ENST00000545354 CCZ1BP86790 482 aa5.35□□□□□ -1.55
UBE4A-203ENST00000545354 CCZ1P86791 482 aaPredicted RBP5.35□□□□□ -1.55
UBE4A-203ENST00000545354 OCRLQ01968 901 aa5.35□□□□□ -1.55
UBE4A-203ENST00000545354 RESTQ13127 1097 aa5.35□□□□□ -1.55
UBE4A-203ENST00000545354 NPTX1Q15818 432 aa5.35□□□□□ -1.55
UBE4A-203ENST00000545354 MDH1BQ5I0G3 518 aa5.35□□□□□ -1.55
UBE4A-203ENST00000545354 PTRHD1Q6GMV3 140 aaKnown RBP5.35□□□□□ -1.55
UBE4A-203ENST00000545354 FAM109BQ6ICB4 259 aaPredicted RBP5.35□□□□□ -1.55
UBE4A-203ENST00000545354 TPGS1Q6ZTW0 290 aa5.35□□□□□ -1.55
UBE4A-203ENST00000545354 UTS2BQ765I0 119 aa5.35□□□□□ -1.55
UBE4A-203ENST00000545354 MARK2Q7KZI7 788 aaKnown RBP5.35□□□□□ -1.55
UBE4A-203ENST00000545354 TRMT44Q8IYL2 757 aaKnown RBP5.35□□□□□ -1.55
UBE4A-203ENST00000545354 NRSN1Q8IZ57 195 aa5.35□□□□□ -1.55
UBE4A-203ENST00000545354 CBARPQ8N350 705 aaPredicted RBP5.35□□□□□ -1.55
UBE4A-203ENST00000545354 CPSF7Q8N684 471 aaKnown RBP5.35□□□□□ -1.55
UBE4A-203ENST00000545354 SLC24A4Q8NFF2 622 aa5.35□□□□□ -1.55
UBE4A-203ENST00000545354 SPPL3Q8TCT6 385 aa5.35□□□□□ -1.55
UBE4A-203ENST00000545354 SLC44A1Q8WWI5 657 aa5.35□□□□□ -1.55
UBE4A-203ENST00000545354 GAB3Q8WWW8 586 aa5.35□□□□□ -1.55
UBE4A-203ENST00000545354 XPO6Q96QU8 1125 aaKnown RBP5.35□□□□□ -1.55
UBE4A-203ENST00000545354 MYD88Q99836 296 aa5.35□□□□□ -1.55
UBE4A-203ENST00000545354 CCM2Q9BSQ5 444 aa5.35□□□□□ -1.55
UBE4A-203ENST00000545354 RPRD1BQ9NQG5 326 aaKnown RBP5.35□□□□□ -1.55
UBE4A-203ENST00000545354 NUDT15Q9NV35 164 aa5.35□□□□□ -1.55
UBE4A-203ENST00000545354 GDAP2Q9NXN4 497 aa5.35□□□□□ -1.55
UBE4A-203ENST00000545354 USP20Q9Y2K6 914 aa5.35□□□□□ -1.55
UBE4A-203ENST00000545354 WBP11Q9Y2W2 641 aaKnown RBP5.35□□□□□ -1.55
UBE4A-203ENST00000545354 ZFYVE16Q7Z3T8 1539 aa5.34□□□□□ -1.55
UBE4A-203ENST00000545354 HFM1A2PYH4 1435 aa5.34□□□□□ -1.55
UBE4A-203ENST00000545354 MYBBP1AQ9BQG0 1328 aaKnown RBP5.34□□□□□ -1.55
UBE4A-203ENST00000545354 PCDH11XQ9BZA7 1347 aa5.34□□□□□ -1.55
UBE4A-203ENST00000545354 PCDH11YQ9BZA8 1340 aa5.34□□□□□ -1.55
UBE4A-203ENST00000545354 A0A1W2PQ67 120 aa5.34□□□□□ -1.55
UBE4A-203ENST00000545354 GSTTP1A0A1W2PQM5 241 aa5.34□□□□□ -1.55
UBE4A-203ENST00000545354 ARHGEF35A5YM69 484 aa5.34□□□□□ -1.55
UBE4A-203ENST00000545354 C5orf60A6NFR6 353 aa5.34□□□□□ -1.55
UBE4A-203ENST00000545354 VSTM5A8MXK1 200 aa5.34□□□□□ -1.55
UBE4A-203ENST00000545354 EVPLLA8MZ36 301 aa5.34□□□□□ -1.55
UBE4A-203ENST00000545354 C2orf74A8MZ97 194 aa5.34□□□□□ -1.55
UBE4A-203ENST00000545354 F8W8V4 182 aa5.34□□□□□ -1.55
UBE4A-203ENST00000545354 KIAA0355O15063 1070 aa5.34□□□□□ -1.55
UBE4A-203ENST00000545354 THAP12O43422 761 aa5.34□□□□□ -1.55
UBE4A-203ENST00000545354 TMEM127O75204 238 aa5.34□□□□□ -1.55
UBE4A-203ENST00000545354 PLATP00750 562 aa5.34□□□□□ -1.55
UBE4A-203ENST00000545354 APOC1P02654 83 aa5.34□□□□□ -1.55
UBE4A-203ENST00000545354 CALB1P05937 261 aa5.34□□□□□ -1.55
UBE4A-203ENST00000545354 URODP06132 367 aa5.34□□□□□ -1.55
UBE4A-203ENST00000545354 HSD3B1P14060 373 aa5.34□□□□□ -1.55
UBE4A-203ENST00000545354 NQO1P15559 274 aaKnown RBP5.34□□□□□ -1.55
UBE4A-203ENST00000545354 SLC9A1P19634 815 aa5.34□□□□□ -1.55
UBE4A-203ENST00000545354 F8A1P23610 371 aa5.34□□□□□ -1.55
UBE4A-203ENST00000545354 TRHRP34981 398 aaPredicted RBP5.34□□□□□ -1.55
UBE4A-203ENST00000545354 HOXD13P35453 343 aa5.34□□□□□ -1.55
UBE4A-203ENST00000545354 CCT3P49368 545 aaKnown RBP5.34□□□□□ -1.55
UBE4A-203ENST00000545354 ZNF135P52742 658 aaPredicted RBP5.34□□□□□ -1.55
UBE4A-203ENST00000545354 ARFIP1P53367 373 aa5.34□□□□□ -1.55
UBE4A-203ENST00000545354 NPEPPSP55786 919 aa5.34□□□□□ -1.55
UBE4A-203ENST00000545354 FANCCQ00597 558 aa5.34□□□□□ -1.55
UBE4A-203ENST00000545354 KCNC4Q03721 635 aa5.34□□□□□ -1.55
UBE4A-203ENST00000545354 SSRP1Q08945 709 aaKnown RBP5.34□□□□□ -1.55
UBE4A-203ENST00000545354 AP3B2Q13367 1082 aa5.34□□□□□ -1.55
UBE4A-203ENST00000545354 NAB1Q13506 487 aa5.34□□□□□ -1.55
UBE4A-203ENST00000545354 SERINC3Q13530 473 aa5.34□□□□□ -1.55
UBE4A-203ENST00000545354 MLC1Q15049 377 aa5.34□□□□□ -1.55
UBE4A-203ENST00000545354 MAPK6Q16659 721 aa5.34□□□□□ -1.55
UBE4A-203ENST00000545354 SKIDA1Q1XH10 827 aa5.34□□□□□ -1.55
UBE4A-203ENST00000545354 ALG11Q2TAA5 492 aa5.34□□□□□ -1.55
UBE4A-203ENST00000545354 SLC39A12Q504Y0 691 aa5.34□□□□□ -1.55
UBE4A-203ENST00000545354 ATAD3BQ5T9A4 648 aa5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms