RNA–Protein interactions for RNA: ENST00000544910.5

VPS50-220, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2 BASIC

Gene VPS50, Length 5,736 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-220ENST00000544910 TFB1MQ8WVM0 346 aaKnown RBP6.02□□□□□ -1.45
VPS50-220ENST00000544910 FAM161BQ96MY7 647 aa6.02□□□□□ -1.45
VPS50-220ENST00000544910 ACO2Q99798 780 aaKnown RBP6.02□□□□□ -1.45
VPS50-220ENST00000544910 TRIM33Q9UPN9 1127 aa6.02□□□□□ -1.45
VPS50-220ENST00000544910 DRG1Q9Y295 367 aaKnown RBP6.02□□□□□ -1.45
VPS50-220ENST00000544910 ACTL7BQ9Y614 415 aa6.02□□□□□ -1.45
VPS50-220ENST00000544910 RRN3P2A6NIE6 340 aa6.02□□□□□ -1.45
VPS50-220ENST00000544910 ACKR2O00590 384 aa6.02□□□□□ -1.45
VPS50-220ENST00000544910 GRIN2DO15399 1336 aa6.02□□□□□ -1.45
VPS50-220ENST00000544910 C4BPAP04003 597 aaKnown RBP6.02□□□□□ -1.45
VPS50-220ENST00000544910 VTNP04004 478 aa6.02□□□□□ -1.45
VPS50-220ENST00000544910 ENO1P06733 434 aaKnown RBP6.02□□□□□ -1.45
VPS50-220ENST00000544910 CA8P35219 290 aa6.02□□□□□ -1.45
VPS50-220ENST00000544910 CNTNAP1P78357 1384 aa6.02□□□□□ -1.45
VPS50-220ENST00000544910 ZACNQ401N2 412 aa6.02□□□□□ -1.45
VPS50-220ENST00000544910 EFHC1Q5JVL4 640 aa6.02□□□□□ -1.45
VPS50-220ENST00000544910 MYH14Q7Z406 1995 aaKnown RBP6.02□□□□□ -1.45
VPS50-220ENST00000544910 FAM172AQ8WUF8 416 aa6.02□□□□□ -1.45
VPS50-220ENST00000544910 PIK3R5Q8WYR1 880 aa6.02□□□□□ -1.45
VPS50-220ENST00000544910 CNPY3Q9BT09 278 aa6.02□□□□□ -1.45
VPS50-220ENST00000544910 PFDN4Q9NQP4 134 aa6.02□□□□□ -1.45
VPS50-220ENST00000544910 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.02□□□□□ -1.45
VPS50-220ENST00000544910 LACTBL1A8MY62 500 aa6.02□□□□□ -1.45
VPS50-220ENST00000544910 PDGFRBP09619 1106 aa6.02□□□□□ -1.45
VPS50-220ENST00000544910 CYP2C8P10632 490 aa6.02□□□□□ -1.45
VPS50-220ENST00000544910 GNL1P36915 607 aaPredicted RBP6.02□□□□□ -1.45
VPS50-220ENST00000544910 PNPLA4P41247 253 aa6.02□□□□□ -1.45
VPS50-220ENST00000544910 TNFSF9P41273 254 aa6.02□□□□□ -1.45
VPS50-220ENST00000544910 TAS2R40P59535 323 aa6.02□□□□□ -1.45
VPS50-220ENST00000544910 KLC1Q07866 573 aa6.02□□□□□ -1.45
VPS50-220ENST00000544910 TMEM62Q0P6H9 643 aa6.02□□□□□ -1.45
VPS50-220ENST00000544910 TBCCQ15814 346 aa6.02□□□□□ -1.45
VPS50-220ENST00000544910 TTC27Q6P3X3 843 aa6.02□□□□□ -1.45
VPS50-220ENST00000544910 EMC1Q8N766 993 aa6.02□□□□□ -1.45
VPS50-220ENST00000544910 CKAP2Q8WWK9 683 aa6.02□□□□□ -1.45
VPS50-220ENST00000544910 NSL1Q96IY1 281 aa6.02□□□□□ -1.45
VPS50-220ENST00000544910 ADARB2Q9NS39 739 aaKnown RBP6.02□□□□□ -1.45
VPS50-220ENST00000544910 SLC12A6Q9UHW9 1150 aa6.02□□□□□ -1.45
VPS50-220ENST00000544910 BARX2Q9UMQ3 279 aaPredicted RBP6.02□□□□□ -1.45
VPS50-220ENST00000544910 F8VP50 259 aa6.02□□□□□ -1.45
VPS50-220ENST00000544910 ITGAVP06756 1048 aa6.02□□□□□ -1.45
VPS50-220ENST00000544910 ETS1P14921 441 aa6.02□□□□□ -1.45
VPS50-220ENST00000544910 TAC1P20366 129 aa6.02□□□□□ -1.45
VPS50-220ENST00000544910 STX3Q13277 289 aa6.02□□□□□ -1.45
VPS50-220ENST00000544910 ACAP1Q15027 740 aa6.02□□□□□ -1.45
VPS50-220ENST00000544910 CHI3L2Q15782 390 aa6.02□□□□□ -1.45
VPS50-220ENST00000544910 QPCTQ16769 361 aa6.02□□□□□ -1.45
VPS50-220ENST00000544910 CELF3Q5SZQ8 465 aaKnown RBP6.02□□□□□ -1.45
VPS50-220ENST00000544910 APBB2Q92870 758 aa6.02□□□□□ -1.45
VPS50-220ENST00000544910 MTBPQ96DY7 904 aa6.02□□□□□ -1.45
VPS50-220ENST00000544910 BORCS6Q96GS4 357 aa6.02□□□□□ -1.45
VPS50-220ENST00000544910 RMDN2Q96LZ7 410 aa6.02□□□□□ -1.45
VPS50-220ENST00000544910 FAM111AQ96PZ2 611 aa6.02□□□□□ -1.45
VPS50-220ENST00000544910 CHCHD3Q9NX63 227 aaKnown RBP6.02□□□□□ -1.45
VPS50-220ENST00000544910 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP6.02□□□□□ -1.45
VPS50-220ENST00000544910 SIGLEC16A6NMB1 481 aa6.01□□□□□ -1.45
VPS50-220ENST00000544910 TRIM49D1C9J1S8 452 aa6.01□□□□□ -1.45
VPS50-220ENST00000544910 AP3B1O00203 1094 aa6.01□□□□□ -1.45
VPS50-220ENST00000544910 PSMD3O43242 534 aa6.01□□□□□ -1.45
VPS50-220ENST00000544910 PDHA1P08559 390 aa6.01□□□□□ -1.45
VPS50-220ENST00000544910 HSPA8P11142 646 aaKnown RBP6.01□□□□□ -1.45
VPS50-220ENST00000544910 PGM1P36871 562 aa6.01□□□□□ -1.45
VPS50-220ENST00000544910 PDK1Q15118 436 aa6.01□□□□□ -1.45
VPS50-220ENST00000544910 MTFR1Q15390 333 aa6.01□□□□□ -1.45
VPS50-220ENST00000544910 MDH1BQ5I0G3 518 aa6.01□□□□□ -1.45
VPS50-220ENST00000544910 DENND1BQ6P3S1 775 aa6.01□□□□□ -1.45
VPS50-220ENST00000544910 KLC3Q6P597 504 aa6.01□□□□□ -1.45
VPS50-220ENST00000544910 DENND5BQ6ZUT9 1274 aa6.01□□□□□ -1.45
VPS50-220ENST00000544910 ACAD11Q709F0 780 aa6.01□□□□□ -1.45
VPS50-220ENST00000544910 NLRP9Q7RTR0 991 aa6.01□□□□□ -1.45
VPS50-220ENST00000544910 ERO1BQ86YB8 467 aa6.01□□□□□ -1.45
VPS50-220ENST00000544910 CCDC117Q8IWD4 279 aaPredicted RBP6.01□□□□□ -1.45
VPS50-220ENST00000544910 RNF139Q8WU17 664 aa6.01□□□□□ -1.45
VPS50-220ENST00000544910 E2F7Q96AV8 911 aa6.01□□□□□ -1.45
VPS50-220ENST00000544910 TLCD1Q96CP7 247 aa6.01□□□□□ -1.45
VPS50-220ENST00000544910 TRIM56Q9BRZ2 755 aaKnown RBP6.01□□□□□ -1.45
VPS50-220ENST00000544910 TRIM62Q9BVG3 475 aa6.01□□□□□ -1.45
VPS50-220ENST00000544910 GPATCH2LQ9NWQ4 482 aa6.01□□□□□ -1.45
VPS50-220ENST00000544910 MYPNQ86TC9 1320 aa6.01□□□□□ -1.45
VPS50-220ENST00000544910 hCG_1818297A0A087WSY0 165 aa6.01□□□□□ -1.45
VPS50-220ENST00000544910 A0A087WZ62 844 aa6.01□□□□□ -1.45
VPS50-220ENST00000544910 SPDYE16A6NNV3 312 aaPredicted RBP6.01□□□□□ -1.45
VPS50-220ENST00000544910 DIAPH2O60879 1101 aa6.01□□□□□ -1.45
VPS50-220ENST00000544910 CYP1A1P04798 512 aaPredicted RBP6.01□□□□□ -1.45
VPS50-220ENST00000544910 KDELR1P24390 212 aa6.01□□□□□ -1.45
VPS50-220ENST00000544910 TYK2P29597 1187 aa6.01□□□□□ -1.45
VPS50-220ENST00000544910 SESN2P58004 480 aaPredicted RBP6.01□□□□□ -1.45
VPS50-220ENST00000544910 PTP4A2Q12974 167 aa6.01□□□□□ -1.45
VPS50-220ENST00000544910 RPS6KA2Q15349 733 aa6.01□□□□□ -1.45
VPS50-220ENST00000544910 PKN2Q16513 984 aaKnown RBP6.01□□□□□ -1.45
VPS50-220ENST00000544910 CYP1B1Q16678 543 aa6.01□□□□□ -1.45
VPS50-220ENST00000544910 DNAL1Q4LDG9 190 aa6.01□□□□□ -1.45
VPS50-220ENST00000544910 DAB2IPQ5VWQ8 1189 aa6.01□□□□□ -1.45
VPS50-220ENST00000544910 PID1Q7Z2X4 250 aa6.01□□□□□ -1.45
VPS50-220ENST00000544910 C2orf69Q8N8R5 385 aa6.01□□□□□ -1.45
VPS50-220ENST00000544910 REPS2Q8NFH8 660 aa6.01□□□□□ -1.45
VPS50-220ENST00000544910 RXFP2Q8WXD0 754 aa6.01□□□□□ -1.45
VPS50-220ENST00000544910 FDXACB1Q9BRP7 624 aaPredicted RBP6.01□□□□□ -1.45
VPS50-220ENST00000544910 FSD1LQ9BXM9 530 aa6.01□□□□□ -1.45
VPS50-220ENST00000544910 ZFATQ9P243 1243 aa6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms